RNA–Protein interactions for RNA: ENST00000480548.5

SGIP1-209, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 5

Gene SGIP1, Length 801 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-209ENST00000480548 ACACBO00763 2458 aa0.14□□□□□ -2.39
SGIP1-209ENST00000480548 CCDC168Q8NDH2 2452 aa0.14□□□□□ -2.39
SGIP1-209ENST00000480548 MXRA5Q9NR99 2828 aa0.13□□□□□ -2.39
SGIP1-209ENST00000480548 ATP7AQ04656 1500 aa0.13□□□□□ -2.39
SGIP1-209ENST00000480548 TRIOO75962 3097 aa0.12□□□□□ -2.39
SGIP1-209ENST00000480548 VPS13DQ5THJ4 4388 aa0.12□□□□□ -2.39
SGIP1-209ENST00000480548 DNAH6Q9C0G6 4158 aa0.12□□□□□ -2.39
SGIP1-209ENST00000480548 DYNC2H1Q8NCM8 4307 aaKnown RBP0.12□□□□□ -2.39
SGIP1-209ENST00000480548 SPTBN5Q9NRC6 3674 aaKnown RBP0.11□□□□□ -2.39
SGIP1-209ENST00000480548 COL6A5A8TX70 2615 aa0.11□□□□□ -2.39
SGIP1-209ENST00000480548 SPRR2FQ96RM1 72 aa0.11□□□□□ -2.39
SGIP1-209ENST00000480548 MUC12Q9UKN1 5478 aa0.1□□□□□ -2.39
SGIP1-209ENST00000480548 LAMA5O15230 3695 aa0.08□□□□□ -2.4
SGIP1-209ENST00000480548 MGAM2Q2M2H8 2515 aa0.07□□□□□ -2.4
SGIP1-209ENST00000480548 POLR2KP53803 58 aaKnown RBP0.07□□□□□ -2.4
SGIP1-209ENST00000480548 FRYQ5TBA9 3013 aa0.06□□□□□ -2.4
SGIP1-209ENST00000480548 SAMD9LQ8IVG5 1584 aa0.06□□□□□ -2.4
SGIP1-209ENST00000480548 DNAH1Q9P2D7 4330 aa0.06□□□□□ -2.4
SGIP1-209ENST00000480548 MUC2Q02817 5179 aa0.04□□□□□ -2.4
SGIP1-209ENST00000480548 LAMA1P25391 3075 aa0.04□□□□□ -2.4
SGIP1-209ENST00000480548 DSTQ03001 7570 aaKnown RBP0.04□□□□□ -2.4
SGIP1-209ENST00000480548 CLPSL2Q6UWE3 100 aa0.03□□□□□ -2.4
SGIP1-209ENST00000480548 FAT1Q14517 4588 aa0.03□□□□□ -2.4
SGIP1-209ENST00000480548 CELSR3Q9NYQ7 3312 aa0.02□□□□□ -2.41
SGIP1-209ENST00000480548 NEBP20929 6669 aa0.02□□□□□ -2.41
SGIP1-209ENST00000480548 DOPEY1Q5JWR5 2465 aa0.01□□□□□ -2.41
SGIP1-209ENST00000480548 USP9XQ93008 2570 aaPredicted RBP0□□□□□ -2.41
SGIP1-209ENST00000480548 ADGRG4Q8IZF6 3080 aa0□□□□□ -2.41
SGIP1-209ENST00000480548 TOP2AP11388 1531 aaKnown RBP0□□□□□ -2.41
SGIP1-209ENST00000480548 KRTAP19-7Q3SYF9 63 aa0□□□□□ -2.41
SGIP1-209ENST00000480548 TLN2Q9Y4G6 2542 aa0□□□□□ -2.41
SGIP1-209ENST00000480548 DNAH8Q96JB1 4490 aa-0□□□□□ -2.41
SGIP1-209ENST00000480548 SPTAN1Q13813 2472 aaKnown RBP-0.01□□□□□ -2.41
SGIP1-209ENST00000480548 SRCAPQ6ZRS2 3230 aa-0.01□□□□□ -2.41
SGIP1-209ENST00000480548 USP9YO00507 2555 aaPredicted RBP-0.01□□□□□ -2.41
SGIP1-209ENST00000480548 PCLOQ9Y6V0 5065 aa-0.02□□□□□ -2.41
SGIP1-209ENST00000480548 CHD7Q9P2D1 2997 aa-0.02□□□□□ -2.41
SGIP1-209ENST00000480548 RYR3Q15413 4870 aa-0.02□□□□□ -2.41
SGIP1-209ENST00000480548 HYDINQ4G0P3 5121 aa-0.02□□□□□ -2.41
SGIP1-209ENST00000480548 ITPR1Q14643 2758 aa-0.03□□□□□ -2.41
SGIP1-209ENST00000480548 SPART-AS1P0CW21 52 aa-0.03□□□□□ -2.41
SGIP1-209ENST00000480548 KRTAP19-8Q3LI54 63 aa-0.03□□□□□ -2.41
SGIP1-209ENST00000480548 KRTAP20-2Q3LI61 65 aa-0.03□□□□□ -2.41
SGIP1-209ENST00000480548 KRTAP8-1Q8IUC2 63 aa-0.03□□□□□ -2.41
SGIP1-209ENST00000480548 KMT2CQ8NEZ4 4911 aaKnown RBP-0.03□□□□□ -2.41
SGIP1-209ENST00000480548 RNF213Q63HN8 5207 aa-0.04□□□□□ -2.42
SGIP1-209ENST00000480548 CFAP46Q8IYW2 2715 aa-0.04□□□□□ -2.42
SGIP1-209ENST00000480548 DNAH7Q8WXX0 4024 aa-0.04□□□□□ -2.42
SGIP1-209ENST00000480548 RYR1P21817 5038 aa-0.04□□□□□ -2.42
SGIP1-209ENST00000480548 C5orf42Q9H799 3197 aa-0.04□□□□□ -2.42
SGIP1-209ENST00000480548 STARD9Q9P2P6 4700 aa-0.05□□□□□ -2.42
SGIP1-209ENST00000480548 ITPR3Q14573 2671 aa-0.05□□□□□ -2.42
SGIP1-209ENST00000480548 EPPK1P58107 5090 aaKnown RBP-0.05□□□□□ -2.42
SGIP1-209ENST00000480548 DEFB104AQ8WTQ1 72 aa-0.05□□□□□ -2.42
SGIP1-209ENST00000480548 UBR4Q5T4S7 5183 aa-0.05□□□□□ -2.42
SGIP1-209ENST00000480548 CRYBG3Q68DQ2 2970 aa-0.06□□□□□ -2.42
SGIP1-209ENST00000480548 HERC2O95714 4834 aa-0.06□□□□□ -2.42
SGIP1-209ENST00000480548 KRTAP6-1Q3LI64 71 aa-0.06□□□□□ -2.42
SGIP1-209ENST00000480548 LAMA2P24043 3122 aaKnown RBP-0.06□□□□□ -2.42
SGIP1-209ENST00000480548 MGAQ8IWI9 3026 aa-0.06□□□□□ -2.42
SGIP1-209ENST00000480548 HERC1Q15751 4861 aa-0.07□□□□□ -2.42
SGIP1-209ENST00000480548 USH2AO75445 5202 aa-0.07□□□□□ -2.42
SGIP1-209ENST00000480548 SMR3BP02814 79 aaPredicted RBP-0.07□□□□□ -2.42
SGIP1-209ENST00000480548 KIAA1109Q2LD37 5005 aa-0.07□□□□□ -2.42
SGIP1-209ENST00000480548 LRBAP50851 2863 aa-0.08□□□□□ -2.42
SGIP1-209ENST00000480548 MYO9AB2RTY4 2548 aa-0.08□□□□□ -2.42
SGIP1-209ENST00000480548 KRTAP19-5Q3LI72 72 aa-0.08□□□□□ -2.42
SGIP1-209ENST00000480548 LEAP2Q969E1 77 aa-0.08□□□□□ -2.42
SGIP1-209ENST00000480548 TEX15Q9BXT5 2789 aa-0.08□□□□□ -2.42
SGIP1-209ENST00000480548 NIPBLQ6KC79 2804 aaeCLIP-0.09□□□□□ -2.42
SGIP1-209ENST00000480548 TLN1Q9Y490 2541 aaKnown RBP-0.09□□□□□ -2.42
SGIP1-209ENST00000480548 RELNP78509 3460 aa-0.09□□□□□ -2.42
SGIP1-209ENST00000480548 DEFB1P60022 68 aa-0.09□□□□□ -2.42
SGIP1-209ENST00000480548 CSMD1Q96PZ7 3565 aa-0.09□□□□□ -2.42
SGIP1-209ENST00000480548 ABCA13Q86UQ4 5058 aa-0.1□□□□□ -2.42
SGIP1-209ENST00000480548 ZFHX4Q86UP3 3567 aa-0.1□□□□□ -2.42
SGIP1-209ENST00000480548 CFAP54Q96N23 3096 aa-0.1□□□□□ -2.43
SGIP1-209ENST00000480548 RYR2Q92736 4967 aa-0.1□□□□□ -2.43
SGIP1-209ENST00000480548 RPL39P62891 51 aaKnown RBP-0.1□□□□□ -2.43
SGIP1-209ENST00000480548 DMXL2Q8TDJ6 3036 aa-0.1□□□□□ -2.43
SGIP1-209ENST00000480548 CMYA5Q8N3K9 4069 aa-0.11□□□□□ -2.43
SGIP1-209ENST00000480548 MT4P47944 62 aa-0.11□□□□□ -2.43
SGIP1-209ENST00000480548 TOMM7Q9P0U1 55 aa-0.11□□□□□ -2.43
SGIP1-209ENST00000480548 PLECQ15149 4684 aaKnown RBP-0.11□□□□□ -2.43
SGIP1-209ENST00000480548 TRRAPQ9Y4A5 3859 aa-0.11□□□□□ -2.43
SGIP1-209ENST00000480548 EYSQ5T1H1 3165 aa-0.11□□□□□ -2.43
SGIP1-209ENST00000480548 DYNC1H1Q14204 4646 aaKnown RBP-0.11□□□□□ -2.43
SGIP1-209ENST00000480548 LAMA3Q16787 3333 aa-0.12□□□□□ -2.43
SGIP1-209ENST00000480548 MUC17Q685J3 4493 aa-0.12□□□□□ -2.43
SGIP1-209ENST00000480548 MT1GP13640 62 aa-0.12□□□□□ -2.43
SGIP1-209ENST00000480548 RPL39LQ96EH5 51 aaKnown RBP-0.12□□□□□ -2.43
SGIP1-209ENST00000480548 PRUNE2Q8WUY3 3088 aa-0.13□□□□□ -2.43
SGIP1-209ENST00000480548 A0A096LNI7 61 aa-0.13□□□□□ -2.43
SGIP1-209ENST00000480548 DEFB4AO15263 64 aa-0.13□□□□□ -2.43
SGIP1-209ENST00000480548 BIRC6Q9NR09 4857 aa-0.13□□□□□ -2.43
SGIP1-209ENST00000480548 DNHD1Q96M86 4753 aa-0.13□□□□□ -2.43
SGIP1-209ENST00000480548 CEP250Q9BV73 2442 aa-0.13□□□□□ -2.43
SGIP1-209ENST00000480548 ATMQ13315 3056 aa-0.13□□□□□ -2.43
SGIP1-209ENST00000480548 DNAH17Q9UFH2 4485 aa-0.14□□□□□ -2.43
SGIP1-209ENST00000480548 DNAH10Q8IVF4 4471 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms