RNA–Protein interactions for RNA: ENST00000480112.5

CDK5RAP2-212, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 5,826 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-212ENST00000480112 SPENQ96T58 3664 aaKnown RBP4.98□□□□□ -1.61
CDK5RAP2-212ENST00000480112 COL7A1Q02388 2944 aa4.94□□□□□ -1.62
CDK5RAP2-212ENST00000480112 DNAH11Q96DT5 4516 aa4.93□□□□□ -1.62
CDK5RAP2-212ENST00000480112 MT1HP80294 61 aa4.92□□□□□ -1.62
CDK5RAP2-212ENST00000480112 LCE3CQ5T5A8 94 aa4.92□□□□□ -1.62
CDK5RAP2-212ENST00000480112 MT2AP02795 61 aa4.91□□□□□ -1.62
CDK5RAP2-212ENST00000480112 KRTAP4-1Q9BYQ7 146 aa4.9□□□□□ -1.63
CDK5RAP2-212ENST00000480112 DNAH10Q8IVF4 4471 aa4.89□□□□□ -1.63
CDK5RAP2-212ENST00000480112 MUC3AQ02505 3323 aa4.87□□□□□ -1.63
CDK5RAP2-212ENST00000480112 TRRAPQ9Y4A5 3859 aa4.87□□□□□ -1.63
CDK5RAP2-212ENST00000480112 KRTAP19-5Q3LI72 72 aa4.84□□□□□ -1.63
CDK5RAP2-212ENST00000480112 CSMD2Q7Z408 3487 aa4.83□□□□□ -1.64
CDK5RAP2-212ENST00000480112 DNAH1Q9P2D7 4330 aa4.82□□□□□ -1.64
CDK5RAP2-212ENST00000480112 AKAP9Q99996 3911 aa4.82□□□□□ -1.64
CDK5RAP2-212ENST00000480112 VPS13CQ709C8 3753 aa4.81□□□□□ -1.64
CDK5RAP2-212ENST00000480112 KRTAP10-7P60409 375 aaPredicted RBP4.78□□□□□ -1.64
CDK5RAP2-212ENST00000480112 DNAH9Q9NYC9 4486 aa4.76□□□□□ -1.65
CDK5RAP2-212ENST00000480112 MT1FP04733 61 aa4.75□□□□□ -1.65
CDK5RAP2-212ENST00000480112 DNAH5Q8TE73 4624 aa4.75□□□□□ -1.65
CDK5RAP2-212ENST00000480112 DNAH17Q9UFH2 4485 aa4.75□□□□□ -1.65
CDK5RAP2-212ENST00000480112 CUBNO60494 3623 aa4.72□□□□□ -1.65
CDK5RAP2-212ENST00000480112 KRTAP19-8Q3LI54 63 aa4.69□□□□□ -1.66
CDK5RAP2-212ENST00000480112 SPRR5A0A1B0GTR4 108 aa4.68□□□□□ -1.66
CDK5RAP2-212ENST00000480112 DNHD1Q96M86 4753 aa4.65□□□□□ -1.67
CDK5RAP2-212ENST00000480112 VPS13DQ5THJ4 4388 aa4.63□□□□□ -1.67
CDK5RAP2-212ENST00000480112 PLECQ15149 4684 aaKnown RBP4.63□□□□□ -1.67
CDK5RAP2-212ENST00000480112 SPRR2FQ96RM1 72 aa4.62□□□□□ -1.67
CDK5RAP2-212ENST00000480112 SACSQ9NZJ4 4579 aa4.6□□□□□ -1.67
CDK5RAP2-212ENST00000480112 DYNC1H1Q14204 4646 aaKnown RBP4.59□□□□□ -1.67
CDK5RAP2-212ENST00000480112 DNAH8Q96JB1 4490 aa4.59□□□□□ -1.67
CDK5RAP2-212ENST00000480112 DNAH3Q8TD57 4116 aa4.59□□□□□ -1.67
CDK5RAP2-212ENST00000480112 KRTAP19-1Q8IUB9 90 aa4.54□□□□□ -1.68
CDK5RAP2-212ENST00000480112 DYNC2H1Q8NCM8 4307 aaKnown RBP4.54□□□□□ -1.68
CDK5RAP2-212ENST00000480112 ZNF469Q96JG9 3925 aaPredicted RBP4.51□□□□□ -1.69
CDK5RAP2-212ENST00000480112 FAT1Q14517 4588 aa4.49□□□□□ -1.69
CDK5RAP2-212ENST00000480112 CSMD3Q7Z407 3707 aa4.49□□□□□ -1.69
CDK5RAP2-212ENST00000480112 CMYA5Q8N3K9 4069 aa4.49□□□□□ -1.69
CDK5RAP2-212ENST00000480112 MT1XP80297 61 aa4.49□□□□□ -1.69
CDK5RAP2-212ENST00000480112 FAT2Q9NYQ8 4349 aa4.48□□□□□ -1.69
CDK5RAP2-212ENST00000480112 KRTAP12-4P60329 112 aa4.47□□□□□ -1.69
CDK5RAP2-212ENST00000480112 LRP1Q07954 4544 aaKnown RBP4.44□□□□□ -1.7
CDK5RAP2-212ENST00000480112 HERC1Q15751 4861 aa4.43□□□□□ -1.7
CDK5RAP2-212ENST00000480112 LRP1BQ9NZR2 4599 aa4.42□□□□□ -1.7
CDK5RAP2-212ENST00000480112 APOBP04114 4563 aaKnown RBP4.41□□□□□ -1.7
CDK5RAP2-212ENST00000480112 RYR1P21817 5038 aa4.4□□□□□ -1.7
CDK5RAP2-212ENST00000480112 HSPG2P98160 4391 aa4.4□□□□□ -1.7
CDK5RAP2-212ENST00000480112 DNAH6Q9C0G6 4158 aa4.4□□□□□ -1.71
CDK5RAP2-212ENST00000480112 LCE3BQ5TA77 95 aa4.4□□□□□ -1.71
CDK5RAP2-212ENST00000480112 MT1BP07438 61 aa4.39□□□□□ -1.71
CDK5RAP2-212ENST00000480112 MT1GP13640 62 aa4.38□□□□□ -1.71
CDK5RAP2-212ENST00000480112 SPRR2EP22531 72 aa4.33□□□□□ -1.72
CDK5RAP2-212ENST00000480112 SPRR2BP35325 72 aa4.33□□□□□ -1.72
CDK5RAP2-212ENST00000480112 SPRR2AP35326 72 aa4.33□□□□□ -1.72
CDK5RAP2-212ENST00000480112 LCE3DQ9BYE3 92 aa4.33□□□□□ -1.72
CDK5RAP2-212ENST00000480112 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
CDK5RAP2-212ENST00000480112 ANK2Q01484 3957 aa4.3□□□□□ -1.72
CDK5RAP2-212ENST00000480112 STARD9Q9P2P6 4700 aa4.29□□□□□ -1.72
CDK5RAP2-212ENST00000480112 DNAH7Q8WXX0 4024 aa4.28□□□□□ -1.72
CDK5RAP2-212ENST00000480112 KRTAP9-8Q9BYQ0 159 aa4.28□□□□□ -1.72
CDK5RAP2-212ENST00000480112 RYR3Q15413 4870 aa4.27□□□□□ -1.73
CDK5RAP2-212ENST00000480112 PRKDCP78527 4128 aaKnown RBP4.26□□□□□ -1.73
CDK5RAP2-212ENST00000480112 BIRC6Q9NR09 4857 aa4.25□□□□□ -1.73
CDK5RAP2-212ENST00000480112 KRTAP17-1Q9BYP8 105 aa4.25□□□□□ -1.73
CDK5RAP2-212ENST00000480112 LCE2BO14633 110 aa4.24□□□□□ -1.73
CDK5RAP2-212ENST00000480112 FAT3Q8TDW7 4589 aa4.24□□□□□ -1.73
CDK5RAP2-212ENST00000480112 MYCBP2O75592 4640 aa4.24□□□□□ -1.73
CDK5RAP2-212ENST00000480112 SPRR2DP22532 72 aa4.21□□□□□ -1.74
CDK5RAP2-212ENST00000480112 MT1LQ93083 61 aa4.21□□□□□ -1.74
CDK5RAP2-212ENST00000480112 KRTAP9-3Q9BYQ3 159 aa4.21□□□□□ -1.74
CDK5RAP2-212ENST00000480112 RYR2Q92736 4967 aa4.19□□□□□ -1.74
CDK5RAP2-212ENST00000480112 FRAS1Q86XX4 4008 aa4.17□□□□□ -1.74
CDK5RAP2-212ENST00000480112 KIAA1109Q2LD37 5005 aa4.17□□□□□ -1.74
CDK5RAP2-212ENST00000480112 VPS13BQ7Z7G8 4022 aa4.16□□□□□ -1.74
CDK5RAP2-212ENST00000480112 KMT2AQ03164 3969 aa4.16□□□□□ -1.74
CDK5RAP2-212ENST00000480112 KRTAP19-3Q7Z4W3 81 aa4.14□□□□□ -1.75
CDK5RAP2-212ENST00000480112 LCE2CQ5TA81 110 aa4.14□□□□□ -1.75
CDK5RAP2-212ENST00000480112 KRTAP4-8A0A0G2JLE6 195 aa4.12□□□□□ -1.75
CDK5RAP2-212ENST00000480112 KRTAP4-8Q9BYQ9 185 aa4.12□□□□□ -1.75
CDK5RAP2-212ENST00000480112 HECTD4Q9Y4D8 3996 aa4.09□□□□□ -1.75
CDK5RAP2-212ENST00000480112 MT1EP04732 61 aa4.08□□□□□ -1.76
CDK5RAP2-212ENST00000480112 HERC2O95714 4834 aa4.06□□□□□ -1.76
CDK5RAP2-212ENST00000480112 PKD1P98161 4303 aa4□□□□□ -1.77
CDK5RAP2-212ENST00000480112 LYSTQ99698 3801 aa4□□□□□ -1.77
CDK5RAP2-212ENST00000480112 PKHD1L1Q86WI1 4243 aa3.99□□□□□ -1.77
CDK5RAP2-212ENST00000480112 MT3P25713 68 aa3.99□□□□□ -1.77
CDK5RAP2-212ENST00000480112 PRM1P04553 51 aa3.94□□□□□ -1.78
CDK5RAP2-212ENST00000480112 MT1MQ8N339 61 aa3.94□□□□□ -1.78
CDK5RAP2-212ENST00000480112 PCLOQ9Y6V0 5065 aa3.94□□□□□ -1.78
CDK5RAP2-212ENST00000480112 KRTAP9-2Q9BYQ4 174 aa3.93□□□□□ -1.78
CDK5RAP2-212ENST00000480112 KRTAP19-2Q3LHN2 52 aa3.93□□□□□ -1.78
CDK5RAP2-212ENST00000480112 KRTAP4-7Q9BYR0 210 aa3.92□□□□□ -1.78
CDK5RAP2-212ENST00000480112 LCE2DQ5TA82 110 aaPredicted RBP3.84□□□□□ -1.79
CDK5RAP2-212ENST00000480112 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.79
CDK5RAP2-212ENST00000480112 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.79
CDK5RAP2-212ENST00000480112 KRTAP2-1Q9BYU5 128 aa3.84□□□□□ -1.79
CDK5RAP2-212ENST00000480112 KRTAP19-6Q3LI70 58 aa3.83□□□□□ -1.8
CDK5RAP2-212ENST00000480112 KRTAP9-6A0A140TA67 174 aa3.83□□□□□ -1.8
CDK5RAP2-212ENST00000480112 MUC17Q685J3 4493 aa3.78□□□□□ -1.8
CDK5RAP2-212ENST00000480112 MT1AP04731 61 aa3.78□□□□□ -1.8
CDK5RAP2-212ENST00000480112 HYDINQ4G0P3 5121 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms