RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 DNAH1Q9P2D7 4330 aa-0.45□□□□□ -2.48
VLDLR-204ENST00000478776 TRIOO75962 3097 aa-0.46□□□□□ -2.48
VLDLR-204ENST00000478776 TNP1P09430 55 aa-0.46□□□□□ -2.48
VLDLR-204ENST00000478776 LINC00308Q8TCZ7 52 aa-0.46□□□□□ -2.48
VLDLR-204ENST00000478776 LAMA2P24043 3122 aaKnown RBP-0.46□□□□□ -2.48
VLDLR-204ENST00000478776 KRTAP20-1Q3LI63 56 aa-0.48□□□□□ -2.49
VLDLR-204ENST00000478776 USP9XQ93008 2570 aaPredicted RBP-0.48□□□□□ -2.49
VLDLR-204ENST00000478776 CCDC168Q8NDH2 2452 aa-0.49□□□□□ -2.49
VLDLR-204ENST00000478776 H0YGX0 51 aa-0.49□□□□□ -2.49
VLDLR-204ENST00000478776 ABRACLQ9P1F3 81 aa-0.49□□□□□ -2.49
VLDLR-204ENST00000478776 PLECQ15149 4684 aaKnown RBP-0.5□□□□□ -2.49
VLDLR-204ENST00000478776 A0A0C4DFX4 3053 aa-0.5□□□□□ -2.49
VLDLR-204ENST00000478776 CELSR3Q9NYQ7 3312 aa-0.5□□□□□ -2.49
VLDLR-204ENST00000478776 KRTAP19-5Q3LI72 72 aa-0.5□□□□□ -2.49
VLDLR-204ENST00000478776 DNAH8Q96JB1 4490 aa-0.5□□□□□ -2.49
VLDLR-204ENST00000478776 EFCAB6Q5THR3 1501 aa-0.5□□□□□ -2.49
VLDLR-204ENST00000478776 FAM208AQ9UK61 1670 aaKnown RBP-0.5□□□□□ -2.49
VLDLR-204ENST00000478776 M0QY20 66 aa-0.51□□□□□ -2.49
VLDLR-204ENST00000478776 KIF21BO75037 1637 aa-0.51□□□□□ -2.49
VLDLR-204ENST00000478776 NIPBLQ6KC79 2804 aaeCLIP-0.51□□□□□ -2.49
VLDLR-204ENST00000478776 SPENQ96T58 3664 aaKnown RBP-0.51□□□□□ -2.49
VLDLR-204ENST00000478776 AGLP35573 1532 aa-0.52□□□□□ -2.49
VLDLR-204ENST00000478776 LMO7Q8WWI1 1683 aa-0.53□□□□□ -2.49
VLDLR-204ENST00000478776 SYCP2Q9BX26 1530 aa-0.53□□□□□ -2.49
VLDLR-204ENST00000478776 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.53□□□□□ -2.49
VLDLR-204ENST00000478776 SMIM27A0A1W2PRY6 76 aa-0.53□□□□□ -2.49
VLDLR-204ENST00000478776 KAAG1Q9UBP8 84 aa-0.53□□□□□ -2.49
VLDLR-204ENST00000478776 MROH2AA6NES4 1674 aa-0.53□□□□□ -2.49
VLDLR-204ENST00000478776 TEX15Q9BXT5 2789 aa-0.53□□□□□ -2.49
VLDLR-204ENST00000478776 ADCY10Q96PN6 1610 aa-0.53□□□□□ -2.49
VLDLR-204ENST00000478776 A8MTW9 85 aa-0.54□□□□□ -2.5
VLDLR-204ENST00000478776 M0QZ58 72 aa-0.54□□□□□ -2.5
VLDLR-204ENST00000478776 CLPSL2Q6UWE3 100 aa-0.54□□□□□ -2.5
VLDLR-204ENST00000478776 TLN2Q9Y4G6 2542 aa-0.54□□□□□ -2.5
VLDLR-204ENST00000478776 ABCA5Q8WWZ7 1642 aa-0.54□□□□□ -2.5
VLDLR-204ENST00000478776 MT1HP80294 61 aa-0.55□□□□□ -2.5
VLDLR-204ENST00000478776 KRTAP8-1Q8IUC2 63 aa-0.55□□□□□ -2.5
VLDLR-204ENST00000478776 CMYA5Q8N3K9 4069 aa-0.56□□□□□ -2.5
VLDLR-204ENST00000478776 DNAH7Q8WXX0 4024 aa-0.56□□□□□ -2.5
VLDLR-204ENST00000478776 PREX2Q70Z35 1606 aa-0.56□□□□□ -2.5
VLDLR-204ENST00000478776 DEFB1P60022 68 aa-0.57□□□□□ -2.5
VLDLR-204ENST00000478776 FRYQ5TBA9 3013 aa-0.58□□□□□ -2.5
VLDLR-204ENST00000478776 DYNC1H1Q14204 4646 aaKnown RBP-0.58□□□□□ -2.5
VLDLR-204ENST00000478776 SMR3BP02814 79 aaPredicted RBP-0.58□□□□□ -2.5
VLDLR-204ENST00000478776 PLNP26678 52 aa-0.58□□□□□ -2.5
VLDLR-204ENST00000478776 WFDC10BQ8IUB3 73 aa-0.58□□□□□ -2.5
VLDLR-204ENST00000478776 NRXN3Q9Y4C0 1643 aa-0.58□□□□□ -2.5
VLDLR-204ENST00000478776 SPTBN5Q9NRC6 3674 aaKnown RBP-0.58□□□□□ -2.5
VLDLR-204ENST00000478776 ITPR1Q14643 2758 aa-0.58□□□□□ -2.5
VLDLR-204ENST00000478776 RELNP78509 3460 aa-0.59□□□□□ -2.5
VLDLR-204ENST00000478776 ITPR2Q14571 2701 aa-0.59□□□□□ -2.5
VLDLR-204ENST00000478776 LAMA3Q16787 3333 aa-0.6□□□□□ -2.51
VLDLR-204ENST00000478776 ABCC8Q09428 1581 aa-0.6□□□□□ -2.51
VLDLR-204ENST00000478776 C5orf42Q9H799 3197 aa-0.62□□□□□ -2.51
VLDLR-204ENST00000478776 MYO15AQ9UKN7 3530 aa-0.64□□□□□ -2.51
VLDLR-204ENST00000478776 FANCD2Q9BXW9 1451 aa-0.64□□□□□ -2.51
VLDLR-204ENST00000478776 CMC2Q9NRP2 79 aa-0.64□□□□□ -2.51
VLDLR-204ENST00000478776 SRCAPQ6ZRS2 3230 aa-0.64□□□□□ -2.51
VLDLR-204ENST00000478776 DNAH17Q9UFH2 4485 aa-0.64□□□□□ -2.51
VLDLR-204ENST00000478776 IQGAP1P46940 1657 aa-0.65□□□□□ -2.51
VLDLR-204ENST00000478776 DEFB131AP59861 70 aa-0.65□□□□□ -2.51
VLDLR-204ENST00000478776 DDX60Q8IY21 1712 aaKnown RBP-0.65□□□□□ -2.51
VLDLR-204ENST00000478776 DMXL2Q8TDJ6 3036 aa-0.66□□□□□ -2.51
VLDLR-204ENST00000478776 MT1XP80297 61 aa-0.66□□□□□ -2.52
VLDLR-204ENST00000478776 TRRAPQ9Y4A5 3859 aa-0.66□□□□□ -2.52
VLDLR-204ENST00000478776 CHD7Q9P2D1 2997 aa-0.67□□□□□ -2.52
VLDLR-204ENST00000478776 DNAH5Q8TE73 4624 aa-0.67□□□□□ -2.52
VLDLR-204ENST00000478776 TFF3Q07654 80 aa-0.67□□□□□ -2.52
VLDLR-204ENST00000478776 MYO9AB2RTY4 2548 aa-0.67□□□□□ -2.52
VLDLR-204ENST00000478776 LRBAP50851 2863 aa-0.67□□□□□ -2.52
VLDLR-204ENST00000478776 CEP295Q9C0D2 2601 aa-0.68□□□□□ -2.52
VLDLR-204ENST00000478776 SPTAN1Q13813 2472 aaKnown RBP-0.69□□□□□ -2.52
VLDLR-204ENST00000478776 SMIM2Q9BVW6 85 aa-0.69□□□□□ -2.52
VLDLR-204ENST00000478776 LINC01546A6NGU7 62 aa-0.7□□□□□ -2.52
VLDLR-204ENST00000478776 MT1EP04732 61 aa-0.7□□□□□ -2.52
VLDLR-204ENST00000478776 KRTAP19-6Q3LI70 58 aa-0.7□□□□□ -2.52
VLDLR-204ENST00000478776 DNAH10Q8IVF4 4471 aa-0.7□□□□□ -2.52
VLDLR-204ENST00000478776 ADGRG4Q8IZF6 3080 aa-0.71□□□□□ -2.52
VLDLR-204ENST00000478776 CSMD1Q96PZ7 3565 aa-0.71□□□□□ -2.52
VLDLR-204ENST00000478776 SPART-AS1P0CW21 52 aa-0.72□□□□□ -2.52
VLDLR-204ENST00000478776 MGAQ8IWI9 3026 aa-0.72□□□□□ -2.52
VLDLR-204ENST00000478776 TRPM2O94759 1503 aa-0.73□□□□□ -2.53
VLDLR-204ENST00000478776 CFAP46Q8IYW2 2715 aa-0.73□□□□□ -2.53
VLDLR-204ENST00000478776 MT1LQ93083 61 aa-0.73□□□□□ -2.53
VLDLR-204ENST00000478776 NFAT5O94916 1531 aa-0.74□□□□□ -2.53
VLDLR-204ENST00000478776 EYSQ5T1H1 3165 aa-0.74□□□□□ -2.53
VLDLR-204ENST00000478776 CLTCL1P53675 1640 aa-0.75□□□□□ -2.53
VLDLR-204ENST00000478776 ZFHX4Q86UP3 3567 aa-0.75□□□□□ -2.53
VLDLR-204ENST00000478776 TLN1Q9Y490 2541 aaKnown RBP-0.75□□□□□ -2.53
VLDLR-204ENST00000478776 MT1HL1P0DM35 61 aa-0.75□□□□□ -2.53
VLDLR-204ENST00000478776 BOD1L1Q8NFC6 3051 aa-0.75□□□□□ -2.53
VLDLR-204ENST00000478776 POLR2KP53803 58 aaKnown RBP-0.76□□□□□ -2.53
VLDLR-204ENST00000478776 CSMD2Q7Z408 3487 aa-0.76□□□□□ -2.53
VLDLR-204ENST00000478776 SNRPGP15A8MWD9 76 aa-0.77□□□□□ -2.53
VLDLR-204ENST00000478776 SMG1Q96Q15 3661 aaKnown RBP-0.8□□□□□ -2.54
VLDLR-204ENST00000478776 MT1GP13640 62 aa-0.8□□□□□ -2.54
VLDLR-204ENST00000478776 MT1MQ8N339 61 aa-0.8□□□□□ -2.54
VLDLR-204ENST00000478776 NDUFA1O15239 70 aa-0.82□□□□□ -2.54
VLDLR-204ENST00000478776 MT2AP02795 61 aa-0.82□□□□□ -2.54
VLDLR-204ENST00000478776 CENPEQ02224 2701 aa-0.82□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms