RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 CCKP06307 115 aa3.3□□□□□ -1.88
HOXB3-209ENST00000478644 DSCR8Q96T75 97 aa3.3□□□□□ -1.88
HOXB3-209ENST00000478644 JMJD7-PLA2G4BH0Y9G9 81 aa3.29□□□□□ -1.88
HOXB3-209ENST00000478644 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
HOXB3-209ENST00000478644 LINC00472Q9H8W2 130 aa3.29□□□□□ -1.88
HOXB3-209ENST00000478644 LOC110117498A0A087WWA1 95 aa3.28□□□□□ -1.88
HOXB3-209ENST00000478644 PDE6GP18545 87 aa3.28□□□□□ -1.88
HOXB3-209ENST00000478644 OBSCN-AS1Q96MR7 158 aa3.28□□□□□ -1.88
HOXB3-209ENST00000478644 C20orf166-AS1Q96NR2 134 aa3.28□□□□□ -1.88
HOXB3-209ENST00000478644 A0A1W2PPM0 123 aa3.27□□□□□ -1.89
HOXB3-209ENST00000478644 IGKV4-1P06312 121 aa3.26□□□□□ -1.89
HOXB3-209ENST00000478644 Q6ZQT0 140 aa3.26□□□□□ -1.89
HOXB3-209ENST00000478644 H3BT86 120 aa3.25□□□□□ -1.89
HOXB3-209ENST00000478644 COL5A1-AS1Q5SY13 56 aa3.25□□□□□ -1.89
HOXB3-209ENST00000478644 BRK1Q8WUW1 75 aa3.23□□□□□ -1.89
HOXB3-209ENST00000478644 C14orf132Q9NPU4 83 aa3.23□□□□□ -1.89
HOXB3-209ENST00000478644 H3BPC8 53 aa3.22□□□□□ -1.89
HOXB3-209ENST00000478644 SPCS1Q9Y6A9 102 aa3.22□□□□□ -1.89
HOXB3-209ENST00000478644 FLGP20930 4061 aaPredicted RBP3.21□□□□□ -1.9
HOXB3-209ENST00000478644 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
HOXB3-209ENST00000478644 NDUFB1O75438 58 aa3.2□□□□□ -1.9
HOXB3-209ENST00000478644 NREPQ16612 68 aa3.2□□□□□ -1.9
HOXB3-209ENST00000478644 A8MU10 97 aa3.19□□□□□ -1.9
HOXB3-209ENST00000478644 K7EP34 96 aa3.19□□□□□ -1.9
HOXB3-209ENST00000478644 LINC00846Q9NV44 126 aa3.19□□□□□ -1.9
HOXB3-209ENST00000478644 PRO0461Q9UI25 63 aa3.19□□□□□ -1.9
HOXB3-209ENST00000478644 FSIP2Q5CZC0 6907 aa3.18□□□□□ -1.9
HOXB3-209ENST00000478644 IGKV3D-7A0A0C4DH55 119 aa3.18□□□□□ -1.9
HOXB3-209ENST00000478644 UQCRQO14949 82 aa3.18□□□□□ -1.9
HOXB3-209ENST00000478644 KRTAP12-2P59991 146 aa3.18□□□□□ -1.9
HOXB3-209ENST00000478644 C1orf64Q8NEQ6 169 aa3.18□□□□□ -1.9
HOXB3-209ENST00000478644 KRTAP4-3Q9BYR4 195 aa3.18□□□□□ -1.9
HOXB3-209ENST00000478644 A0A1B0GU33 70 aa3.17□□□□□ -1.9
HOXB3-209ENST00000478644 LCE3AQ5TA76 89 aa3.17□□□□□ -1.9
HOXB3-209ENST00000478644 GTF2H5Q6ZYL4 71 aa3.16□□□□□ -1.9
HOXB3-209ENST00000478644 TRAV7A0A075B6U4 112 aa3.15□□□□□ -1.91
HOXB3-209ENST00000478644 F8W1H4 67 aa3.15□□□□□ -1.91
HOXB3-209ENST00000478644 C7orf65Q6ZTY9 151 aa3.15□□□□□ -1.91
HOXB3-209ENST00000478644 FAM236AA0A1B0GUQ0 79 aa3.14□□□□□ -1.91
HOXB3-209ENST00000478644 FAM236BA0A1B0GV22 79 aa3.14□□□□□ -1.91
HOXB3-209ENST00000478644 ZCCHC13Q8WW36 166 aaKnown RBP3.14□□□□□ -1.91
HOXB3-209ENST00000478644 MMP24-AS1A0A0U1RRL7 71 aa3.13□□□□□ -1.91
HOXB3-209ENST00000478644 SPINT4Q6UDR6 99 aa3.13□□□□□ -1.91
HOXB3-209ENST00000478644 K7EQZ3 153 aa3.12□□□□□ -1.91
HOXB3-209ENST00000478644 HRES1P13985 223 aa3.12□□□□□ -1.91
HOXB3-209ENST00000478644 TMEM254Q8TBM7 123 aa3.12□□□□□ -1.91
HOXB3-209ENST00000478644 MRPL34Q9BQ48 92 aaKnown RBP3.12□□□□□ -1.91
HOXB3-209ENST00000478644 hDV103S1A0JD37 113 aa3.11□□□□□ -1.91
HOXB3-209ENST00000478644 KRTAP25-1Q3LHN0 102 aa3.11□□□□□ -1.91
HOXB3-209ENST00000478644 UBL5Q9BZL1 73 aa3.11□□□□□ -1.91
HOXB3-209ENST00000478644 SPINK7P58062 85 aa3.1□□□□□ -1.91
HOXB3-209ENST00000478644 ETDBQ3ZM63 59 aa3.1□□□□□ -1.91
HOXB3-209ENST00000478644 WFDC13Q8IUB5 93 aa3.1□□□□□ -1.91
HOXB3-209ENST00000478644 KRTAP10-10P60014 251 aa3.09□□□□□ -1.91
HOXB3-209ENST00000478644 Q8N9L7 120 aa3.08□□□□□ -1.92
HOXB3-209ENST00000478644 MT2AP02795 61 aa3.07□□□□□ -1.92
HOXB3-209ENST00000478644 CASC2Q6XLA1 102 aa3.07□□□□□ -1.92
HOXB3-209ENST00000478644 ACYP1P07311 99 aa3.06□□□□□ -1.92
HOXB3-209ENST00000478644 R4GN34 69 aa3.06□□□□□ -1.92
HOXB3-209ENST00000478644 HCG22E2RYF7 251 aa3.05□□□□□ -1.92
HOXB3-209ENST00000478644 CCDC179H3BU77 68 aa3.05□□□□□ -1.92
HOXB3-209ENST00000478644 TMEM258P61165 79 aa3.05□□□□□ -1.92
HOXB3-209ENST00000478644 MT1FP04733 61 aa3.03□□□□□ -1.92
HOXB3-209ENST00000478644 H1FX-AS1Q4G0G2 97 aa3.03□□□□□ -1.92
HOXB3-209ENST00000478644 USH2AO75445 5202 aa3.03□□□□□ -1.92
HOXB3-209ENST00000478644 ROMO1P60602 79 aa3.02□□□□□ -1.93
HOXB3-209ENST00000478644 TP53AIP1Q9HCN2 124 aa3.02□□□□□ -1.93
HOXB3-209ENST00000478644 ATP5EP2Q5VTU8 51 aa3.01□□□□□ -1.93
HOXB3-209ENST00000478644 SSPOA2VEC9 5147 aa3.01□□□□□ -1.93
HOXB3-209ENST00000478644 KRTAP19-6Q3LI70 58 aa3□□□□□ -1.93
HOXB3-209ENST00000478644 KRTAP5-5Q701N2 237 aaPredicted RBP2.98□□□□□ -1.93
HOXB3-209ENST00000478644 LINC00643Q86TS7 51 aa2.98□□□□□ -1.93
HOXB3-209ENST00000478644 A6NN06 94 aa2.97□□□□□ -1.93
HOXB3-209ENST00000478644 SERP1Q9Y6X1 66 aa2.97□□□□□ -1.93
HOXB3-209ENST00000478644 FCGBPQ9Y6R7 5405 aaPredicted RBP2.95□□□□□ -1.94
HOXB3-209ENST00000478644 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
HOXB3-209ENST00000478644 TRAV22A0A0B4J277 110 aa2.93□□□□□ -1.94
HOXB3-209ENST00000478644 LOC101927531A0A1B0GV80 90 aa2.93□□□□□ -1.94
HOXB3-209ENST00000478644 CYP4F30PQ9H0H9 118 aa2.93□□□□□ -1.94
HOXB3-209ENST00000478644 A0A087WVE0 104 aa2.92□□□□□ -1.94
HOXB3-209ENST00000478644 CSAG1Q6PB30 78 aa2.92□□□□□ -1.94
HOXB3-209ENST00000478644 PRO2289Q9P1D8 64 aa2.92□□□□□ -1.94
HOXB3-209ENST00000478644 ATOX1O00244 68 aa2.91□□□□□ -1.94
HOXB3-209ENST00000478644 KRTAP6-3Q3LI67 103 aa2.91□□□□□ -1.94
HOXB3-209ENST00000478644 H0Y9P7 68 aa2.89□□□□□ -1.95
HOXB3-209ENST00000478644 S4R3F8 94 aa2.89□□□□□ -1.95
HOXB3-209ENST00000478644 CRIPTQ9P021 101 aa2.88□□□□□ -1.95
HOXB3-209ENST00000478644 MIR22HGQ0VDD5 57 aa2.86□□□□□ -1.95
HOXB3-209ENST00000478644 Q5VV11 94 aa2.86□□□□□ -1.95
HOXB3-209ENST00000478644 LINC00208Q96KT6 92 aa2.85□□□□□ -1.95
HOXB3-209ENST00000478644 SPRR2GQ9BYE4 73 aa2.85□□□□□ -1.95
HOXB3-209ENST00000478644 MACF1Q9UPN3 7388 aaKnown RBP2.83□□□□□ -1.96
HOXB3-209ENST00000478644 MT-ATP8P03928 68 aa2.83□□□□□ -1.96
HOXB3-209ENST00000478644 P0C880 135 aa2.83□□□□□ -1.96
HOXB3-209ENST00000478644 KLKP1Q107X0 134 aa2.83□□□□□ -1.96
HOXB3-209ENST00000478644 KRTAP19-8Q3LI54 63 aa2.82□□□□□ -1.96
HOXB3-209ENST00000478644 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
HOXB3-209ENST00000478644 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
HOXB3-209ENST00000478644 H0YAA0 97 aa2.8□□□□□ -1.96
HOXB3-209ENST00000478644 NDUFC1O43677 76 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms