RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 RBM12B-AS1Q9P1G2 102 aa2.61□□□□□ -1.99
LMBR1-216ENST00000477983 DNAH17Q9UFH2 4485 aa2.6□□□□□ -1.99
LMBR1-216ENST00000477983 DNAH2Q9P225 4427 aa2.6□□□□□ -1.99
LMBR1-216ENST00000477983 CHTF8P0CG12 524 aa2.6□□□□□ -1.99
LMBR1-216ENST00000477983 HRES1P13985 223 aa2.6□□□□□ -1.99
LMBR1-216ENST00000477983 KRTAP10-10P60014 251 aa2.6□□□□□ -1.99
LMBR1-216ENST00000477983 SPAG11AQ6PDA7 123 aa2.6□□□□□ -1.99
LMBR1-216ENST00000477983 SSBP3-AS1Q7Z2R9 100 aa2.6□□□□□ -1.99
LMBR1-216ENST00000477983 TENM2Q9NT68 2774 aa2.6□□□□□ -1.99
LMBR1-216ENST00000477983 IGHV6-1A0A0B4J1U7 121 aa2.59□□□□□ -1.99
LMBR1-216ENST00000477983 HYDINQ4G0P3 5121 aa2.59□□□□□ -1.99
LMBR1-216ENST00000477983 ALMS1Q8TCU4 4167 aa2.59□□□□□ -2
LMBR1-216ENST00000477983 FBN3Q75N90 2809 aa2.59□□□□□ -2
LMBR1-216ENST00000477983 KRTAP5-7Q6L8G8 165 aa2.58□□□□□ -2
LMBR1-216ENST00000477983 SPACA4Q8TDM5 124 aa2.58□□□□□ -2
LMBR1-216ENST00000477983 DMAC1Q96GE9 116 aa2.58□□□□□ -2
LMBR1-216ENST00000477983 DNAH6Q9C0G6 4158 aa2.58□□□□□ -2
LMBR1-216ENST00000477983 UQCR11O14957 56 aa2.57□□□□□ -2
LMBR1-216ENST00000477983 PCOTHQ58A44 107 aa2.57□□□□□ -2
LMBR1-216ENST00000477983 SPATA8Q6RVD6 105 aa2.57□□□□□ -2
LMBR1-216ENST00000477983 A0A0G2JQZ4 141 aa2.56□□□□□ -2
LMBR1-216ENST00000477983 DNAH11Q96DT5 4516 aa2.55□□□□□ -2
LMBR1-216ENST00000477983 A0A1B0GU69 56 aa2.55□□□□□ -2
LMBR1-216ENST00000477983 TGP01266 2768 aa2.55□□□□□ -2
LMBR1-216ENST00000477983 SACSQ9NZJ4 4579 aa2.55□□□□□ -2
LMBR1-216ENST00000477983 KMT2AQ03164 3969 aa2.54□□□□□ -2
LMBR1-216ENST00000477983 SPINK7P58062 85 aa2.54□□□□□ -2
LMBR1-216ENST00000477983 LINC00313P59037 77 aa2.54□□□□□ -2
LMBR1-216ENST00000477983 RETNLBQ9BQ08 111 aa2.54□□□□□ -2
LMBR1-216ENST00000477983 DNAH8Q96JB1 4490 aa2.54□□□□□ -2
LMBR1-216ENST00000477983 DNAH5Q8TE73 4624 aa2.53□□□□□ -2
LMBR1-216ENST00000477983 RYR2Q92736 4967 aa2.52□□□□□ -2.01
LMBR1-216ENST00000477983 FRAS1Q86XX4 4008 aa2.52□□□□□ -2.01
LMBR1-216ENST00000477983 MIR22HGQ0VDD5 57 aa2.52□□□□□ -2.01
LMBR1-216ENST00000477983 PSORS1C2Q9UIG4 136 aa2.52□□□□□ -2.01
LMBR1-216ENST00000477983 HECTD4Q9Y4D8 3996 aa2.51□□□□□ -2.01
LMBR1-216ENST00000477983 IGLV7-43P04211 117 aa2.51□□□□□ -2.01
LMBR1-216ENST00000477983 LINC01554Q52M75 96 aa2.51□□□□□ -2.01
LMBR1-216ENST00000477983 Q5W150 140 aa2.51□□□□□ -2.01
LMBR1-216ENST00000477983 PKD1P98161 4303 aa2.51□□□□□ -2.01
LMBR1-216ENST00000477983 FAT2Q9NYQ8 4349 aa2.5□□□□□ -2.01
LMBR1-216ENST00000477983 CIRBP-AS1Q8TBR5 109 aa2.5□□□□□ -2.01
LMBR1-216ENST00000477983 RPS29P62273 56 aaKnown RBP2.49□□□□□ -2.01
LMBR1-216ENST00000477983 DYNC1H1Q14204 4646 aaKnown RBP2.48□□□□□ -2.01
LMBR1-216ENST00000477983 Q6ZSA8 131 aa2.48□□□□□ -2.01
LMBR1-216ENST00000477983 SPRR5A0A1B0GTR4 108 aa2.47□□□□□ -2.01
LMBR1-216ENST00000477983 SPINK6Q6UWN8 80 aa2.47□□□□□ -2.01
LMBR1-216ENST00000477983 LRP1BQ9NZR2 4599 aa2.46□□□□□ -2.02
LMBR1-216ENST00000477983 SPINK1P00995 79 aa2.46□□□□□ -2.02
LMBR1-216ENST00000477983 KMT2CQ8NEZ4 4911 aaKnown RBP2.45□□□□□ -2.02
LMBR1-216ENST00000477983 RYR3Q15413 4870 aa2.45□□□□□ -2.02
LMBR1-216ENST00000477983 K7ERS5 55 aa2.44□□□□□ -2.02
LMBR1-216ENST00000477983 SRRM2Q9UQ35 2752 aaKnown RBP2.44□□□□□ -2.02
LMBR1-216ENST00000477983 SMR3BP02814 79 aaPredicted RBP2.43□□□□□ -2.02
LMBR1-216ENST00000477983 APOBP04114 4563 aaKnown RBP2.43□□□□□ -2.02
LMBR1-216ENST00000477983 A8MUU9 505 aa2.4□□□□□ -2.03
LMBR1-216ENST00000477983 PKHD1P08F94 4074 aa2.4□□□□□ -2.03
LMBR1-216ENST00000477983 A0A1B0GU33 70 aa2.39□□□□□ -2.03
LMBR1-216ENST00000477983 KRTAP13-2Q52LG2 175 aa2.39□□□□□ -2.03
LMBR1-216ENST00000477983 CSAG1Q6PB30 78 aa2.39□□□□□ -2.03
LMBR1-216ENST00000477983 FAT1Q14517 4588 aa2.39□□□□□ -2.03
LMBR1-216ENST00000477983 RYR1P21817 5038 aa2.39□□□□□ -2.03
LMBR1-216ENST00000477983 KRTAP25-1Q3LHN0 102 aa2.38□□□□□ -2.03
LMBR1-216ENST00000477983 COX6B2Q6YFQ2 88 aa2.38□□□□□ -2.03
LMBR1-216ENST00000477983 C20orf166-AS1Q96NR2 134 aa2.38□□□□□ -2.03
LMBR1-216ENST00000477983 VPS13BQ7Z7G8 4022 aa2.37□□□□□ -2.03
LMBR1-216ENST00000477983 KRTAP10-4P60372 401 aaPredicted RBP2.37□□□□□ -2.03
LMBR1-216ENST00000477983 H1FX-AS1Q4G0G2 97 aa2.36□□□□□ -2.03
LMBR1-216ENST00000477983 ADM2Q7Z4H4 148 aa2.36□□□□□ -2.03
LMBR1-216ENST00000477983 EPPK1P58107 5090 aaKnown RBP2.35□□□□□ -2.03
LMBR1-216ENST00000477983 PKHD1L1Q86WI1 4243 aa2.35□□□□□ -2.03
LMBR1-216ENST00000477983 Q5VSD8 79 aa2.35□□□□□ -2.03
LMBR1-216ENST00000477983 LINC00304Q8N9R0 145 aa2.35□□□□□ -2.03
LMBR1-216ENST00000477983 H0YAA0 97 aa2.34□□□□□ -2.03
LMBR1-216ENST00000477983 ROMO1P60602 79 aa2.34□□□□□ -2.03
LMBR1-216ENST00000477983 CAMK2N1Q7Z7J9 78 aa2.34□□□□□ -2.03
LMBR1-216ENST00000477983 KIAA1109Q2LD37 5005 aa2.34□□□□□ -2.03
LMBR1-216ENST00000477983 HSPG2P98160 4391 aa2.34□□□□□ -2.04
LMBR1-216ENST00000477983 RPL37P61927 97 aaKnown RBP2.31□□□□□ -2.04
LMBR1-216ENST00000477983 FAT3Q8TDW7 4589 aa2.3□□□□□ -2.04
LMBR1-216ENST00000477983 BIRC6Q9NR09 4857 aa2.28□□□□□ -2.04
LMBR1-216ENST00000477983 LRP1Q07954 4544 aaKnown RBP2.28□□□□□ -2.04
LMBR1-216ENST00000477983 C9orf92A6NGG3 77 aa2.27□□□□□ -2.05
LMBR1-216ENST00000477983 CRIPTQ9P021 101 aa2.26□□□□□ -2.05
LMBR1-216ENST00000477983 TNXBP22105 4242 aa2.25□□□□□ -2.05
LMBR1-216ENST00000477983 HERC2O95714 4834 aa2.25□□□□□ -2.05
LMBR1-216ENST00000477983 ABCA13Q86UQ4 5058 aa2.25□□□□□ -2.05
LMBR1-216ENST00000477983 M0QZ58 72 aa2.24□□□□□ -2.05
LMBR1-216ENST00000477983 MT1HL1P0DM35 61 aa2.24□□□□□ -2.05
LMBR1-216ENST00000477983 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
LMBR1-216ENST00000477983 SPINT4Q6UDR6 99 aa2.22□□□□□ -2.05
LMBR1-216ENST00000477983 S4R3F8 94 aa2.22□□□□□ -2.05
LMBR1-216ENST00000477983 MYCBP2O75592 4640 aa2.21□□□□□ -2.06
LMBR1-216ENST00000477983 FLG2Q5D862 2391 aaPredicted RBP2.21□□□□□ -2.06
LMBR1-216ENST00000477983 P0C880 135 aa2.18□□□□□ -2.06
LMBR1-216ENST00000477983 TPRXLQ17RH7 258 aa2.16□□□□□ -2.06
LMBR1-216ENST00000477983 DMBT1Q9UGM3 2413 aaPredicted RBP2.16□□□□□ -2.06
LMBR1-216ENST00000477983 PCLOQ9Y6V0 5065 aa2.15□□□□□ -2.07
LMBR1-216ENST00000477983 A0A0D9SG42 100 aa2.14□□□□□ -2.07
LMBR1-216ENST00000477983 KRTAP13-4Q3LI77 160 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms