RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 KMT2AQ03164 3969 aa0.92□□□□□ -2.26
SMNDC1-205ENST00000477763 HMCN2Q8NDA2 5059 aa0.92□□□□□ -2.26
SMNDC1-205ENST00000477763 MRPL33O75394 65 aaKnown RBP0.91□□□□□ -2.26
SMNDC1-205ENST00000477763 KCNQ1DNQ9H478 68 aa0.91□□□□□ -2.26
SMNDC1-205ENST00000477763 ABRACLQ9P1F3 81 aa0.91□□□□□ -2.26
SMNDC1-205ENST00000477763 APOBP04114 4563 aaKnown RBP0.91□□□□□ -2.26
SMNDC1-205ENST00000477763 FAT1Q14517 4588 aa0.91□□□□□ -2.26
SMNDC1-205ENST00000477763 HSPG2P98160 4391 aa0.9□□□□□ -2.27
SMNDC1-205ENST00000477763 CCL22O00626 93 aa0.9□□□□□ -2.27
SMNDC1-205ENST00000477763 DEFB114Q30KQ6 69 aa0.9□□□□□ -2.27
SMNDC1-205ENST00000477763 COX6B2Q6YFQ2 88 aa0.9□□□□□ -2.27
SMNDC1-205ENST00000477763 MRPL34Q9BQ48 92 aaKnown RBP0.9□□□□□ -2.27
SMNDC1-205ENST00000477763 TNCP24821 2201 aa0.9□□□□□ -2.27
SMNDC1-205ENST00000477763 PKD1P98161 4303 aa0.9□□□□□ -2.27
SMNDC1-205ENST00000477763 AHNAK2Q8IVF2 5795 aa0.9□□□□□ -2.27
SMNDC1-205ENST00000477763 FAT2Q9NYQ8 4349 aa0.89□□□□□ -2.27
SMNDC1-205ENST00000477763 DNAH5Q8TE73 4624 aa0.89□□□□□ -2.27
SMNDC1-205ENST00000477763 WNK2Q9Y3S1 2297 aa0.89□□□□□ -2.27
SMNDC1-205ENST00000477763 SMIM27A0A1W2PRY6 76 aa0.89□□□□□ -2.27
SMNDC1-205ENST00000477763 DEFB108AA8MXU0 73 aa0.89□□□□□ -2.27
SMNDC1-205ENST00000477763 Q5VSD8 79 aa0.89□□□□□ -2.27
SMNDC1-205ENST00000477763 DEFB106AQ8N104 65 aa0.89□□□□□ -2.27
SMNDC1-205ENST00000477763 FAT4Q6V0I7 4981 aa0.89□□□□□ -2.27
SMNDC1-205ENST00000477763 LRP1BQ9NZR2 4599 aa0.89□□□□□ -2.27
SMNDC1-205ENST00000477763 ALMS1Q8TCU4 4167 aa0.89□□□□□ -2.27
SMNDC1-205ENST00000477763 DEFB131BA0A096LNP1 70 aa0.88□□□□□ -2.27
SMNDC1-205ENST00000477763 SERF2P84101 59 aa0.88□□□□□ -2.27
SMNDC1-205ENST00000477763 DEFB110Q30KQ9 67 aa0.88□□□□□ -2.27
SMNDC1-205ENST00000477763 COX14Q96I36 57 aa0.88□□□□□ -2.27
SMNDC1-205ENST00000477763 PKHD1P08F94 4074 aa0.88□□□□□ -2.27
SMNDC1-205ENST00000477763 MUC2Q02817 5179 aa0.87□□□□□ -2.27
SMNDC1-205ENST00000477763 ETDCA0A1B0GVM5 59 aa0.87□□□□□ -2.27
SMNDC1-205ENST00000477763 IGIPA6NJ69 53 aa0.87□□□□□ -2.27
SMNDC1-205ENST00000477763 LYNX1G3V0Z9 82 aa0.87□□□□□ -2.27
SMNDC1-205ENST00000477763 M0R1W7 72 aa0.87□□□□□ -2.27
SMNDC1-205ENST00000477763 SPINK4O60575 86 aa0.87□□□□□ -2.27
SMNDC1-205ENST00000477763 PLNP26678 52 aa0.86□□□□□ -2.27
SMNDC1-205ENST00000477763 SNRPGP62308 76 aaKnown RBP0.86□□□□□ -2.27
SMNDC1-205ENST00000477763 TIMM8BQ9Y5J9 83 aaPredicted RBP0.86□□□□□ -2.27
SMNDC1-205ENST00000477763 VPS13BQ7Z7G8 4022 aa0.86□□□□□ -2.27
SMNDC1-205ENST00000477763 DNAH6Q9C0G6 4158 aa0.86□□□□□ -2.27
SMNDC1-205ENST00000477763 LINC01546A6NGU7 62 aa0.85□□□□□ -2.27
SMNDC1-205ENST00000477763 H0YGG7 62 aa0.85□□□□□ -2.27
SMNDC1-205ENST00000477763 SPRR1AP35321 89 aa0.85□□□□□ -2.27
SMNDC1-205ENST00000477763 APLNQ9ULZ1 77 aa0.85□□□□□ -2.27
SMNDC1-205ENST00000477763 DNAH8Q96JB1 4490 aa0.85□□□□□ -2.27
SMNDC1-205ENST00000477763 LRP1Q07954 4544 aaKnown RBP0.85□□□□□ -2.27
SMNDC1-205ENST00000477763 FAT3Q8TDW7 4589 aa0.84□□□□□ -2.27
SMNDC1-205ENST00000477763 FSIP2Q5CZC0 6907 aa0.84□□□□□ -2.27
SMNDC1-205ENST00000477763 CDKN2A-AS1Q9UH64 79 aa0.84□□□□□ -2.27
SMNDC1-205ENST00000477763 PKHD1L1Q86WI1 4243 aa0.83□□□□□ -2.28
SMNDC1-205ENST00000477763 NDUFA3O95167 84 aa0.83□□□□□ -2.28
SMNDC1-205ENST00000477763 SPRR1BP22528 89 aa0.83□□□□□ -2.28
SMNDC1-205ENST00000477763 DEFB105AQ8NG35 78 aa0.83□□□□□ -2.28
SMNDC1-205ENST00000477763 LRP2P98164 4655 aa0.83□□□□□ -2.28
SMNDC1-205ENST00000477763 DMBT1Q9UGM3 2413 aaPredicted RBP0.83□□□□□ -2.28
SMNDC1-205ENST00000477763 CRIP1P50238 77 aa0.81□□□□□ -2.28
SMNDC1-205ENST00000477763 SSPOA2VEC9 5147 aa0.81□□□□□ -2.28
SMNDC1-205ENST00000477763 USH2AO75445 5202 aa0.81□□□□□ -2.28
SMNDC1-205ENST00000477763 LPAP08519 4548 aa0.8□□□□□ -2.28
SMNDC1-205ENST00000477763 LINC00158P58513 81 aa0.8□□□□□ -2.28
SMNDC1-205ENST00000477763 TNXBP22105 4242 aa0.79□□□□□ -2.28
SMNDC1-205ENST00000477763 H0YGX0 51 aa0.79□□□□□ -2.28
SMNDC1-205ENST00000477763 H1FX-AS1Q4G0G2 97 aa0.79□□□□□ -2.28
SMNDC1-205ENST00000477763 DEFB108BQ8NET1 73 aa0.79□□□□□ -2.28
SMNDC1-205ENST00000477763 LELP1Q5T871 98 aa0.78□□□□□ -2.28
SMNDC1-205ENST00000477763 KRTAP19-3Q7Z4W3 81 aa0.78□□□□□ -2.28
SMNDC1-205ENST00000477763 TMEM167BQ9NRX6 74 aa0.78□□□□□ -2.28
SMNDC1-205ENST00000477763 KLK9Q2XQG4 91 aa0.77□□□□□ -2.29
SMNDC1-205ENST00000477763 WFDC13Q8IUB5 93 aa0.77□□□□□ -2.29
SMNDC1-205ENST00000477763 GPR98Q8WXG9 6306 aa0.77□□□□□ -2.29
SMNDC1-205ENST00000477763 H0YAA0 97 aa0.76□□□□□ -2.29
SMNDC1-205ENST00000477763 SMR3BP02814 79 aaPredicted RBP0.76□□□□□ -2.29
SMNDC1-205ENST00000477763 IAPPP10997 89 aa0.76□□□□□ -2.29
SMNDC1-205ENST00000477763 MINOS1Q5TGZ0 78 aa0.76□□□□□ -2.29
SMNDC1-205ENST00000477763 SPINK6Q6UWN8 80 aa0.76□□□□□ -2.29
SMNDC1-205ENST00000477763 LINC00308Q8TCZ7 52 aa0.76□□□□□ -2.29
SMNDC1-205ENST00000477763 NEBP20929 6669 aa0.75□□□□□ -2.29
SMNDC1-205ENST00000477763 MUC17Q685J3 4493 aa0.75□□□□□ -2.29
SMNDC1-205ENST00000477763 SYNE2Q8WXH0 6885 aaKnown RBP0.75□□□□□ -2.29
SMNDC1-205ENST00000477763 MUC12Q9UKN1 5478 aa0.74□□□□□ -2.29
SMNDC1-205ENST00000477763 H3BSH0 61 aa0.74□□□□□ -2.29
SMNDC1-205ENST00000477763 SPINK1P00995 79 aa0.74□□□□□ -2.29
SMNDC1-205ENST00000477763 RPS27LQ71UM5 84 aaKnown RBP0.74□□□□□ -2.29
SMNDC1-205ENST00000477763 SMIM2Q9BVW6 85 aa0.74□□□□□ -2.29
SMNDC1-205ENST00000477763 KMT2DO14686 5537 aa0.73□□□□□ -2.29
SMNDC1-205ENST00000477763 H3BUX3 64 aa0.73□□□□□ -2.29
SMNDC1-205ENST00000477763 NDUFA1O15239 70 aa0.73□□□□□ -2.29
SMNDC1-205ENST00000477763 DEFB136Q30KP8 78 aa0.73□□□□□ -2.29
SMNDC1-205ENST00000477763 TTTY10Q9BZA0 68 aa0.73□□□□□ -2.29
SMNDC1-205ENST00000477763 ARHGAP5-AS1Q96IT6 56 aa0.72□□□□□ -2.29
SMNDC1-205ENST00000477763 C6orf48Q9UBA6 75 aa0.72□□□□□ -2.29
SMNDC1-205ENST00000477763 MUC5BQ9HC84 5762 aaPredicted RBP0.72□□□□□ -2.29
SMNDC1-205ENST00000477763 MDN1Q9NU22 5596 aa0.72□□□□□ -2.29
SMNDC1-205ENST00000477763 DEFB4AO15263 64 aa0.71□□□□□ -2.3
SMNDC1-205ENST00000477763 MT1HL1P0DM35 61 aa0.7□□□□□ -2.3
SMNDC1-205ENST00000477763 AHNAKQ09666 5890 aaKnown RBP0.69□□□□□ -2.3
SMNDC1-205ENST00000477763 DEFB130BP0DP73 79 aa0.69□□□□□ -2.3
SMNDC1-205ENST00000477763 DEFB130AP0DP74 79 aa0.69□□□□□ -2.3
SMNDC1-205ENST00000477763 RPS27P42677 84 aaKnown RBP0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms