RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 SPRR2BP35325 72 aa2.94□□□□□ -1.94
RTFDC1-206ENST00000477485 SPRR2AP35326 72 aa2.94□□□□□ -1.94
RTFDC1-206ENST00000477485 KLKP1Q107X0 134 aa2.94□□□□□ -1.94
RTFDC1-206ENST00000477485 CASC2Q6XLA1 102 aa2.94□□□□□ -1.94
RTFDC1-206ENST00000477485 LCA10Q71F78 164 aa2.94□□□□□ -1.94
RTFDC1-206ENST00000477485 SPRR2FQ96RM1 72 aa2.94□□□□□ -1.94
RTFDC1-206ENST00000477485 UQCR10Q9UDW1 63 aa2.94□□□□□ -1.94
RTFDC1-206ENST00000477485 Q8N9L7 120 aa2.93□□□□□ -1.94
RTFDC1-206ENST00000477485 C1orf64Q8NEQ6 169 aa2.93□□□□□ -1.94
RTFDC1-206ENST00000477485 CXCL6P80162 114 aa2.91□□□□□ -1.94
RTFDC1-206ENST00000477485 PYY3Q5JQD4 70 aa2.91□□□□□ -1.94
RTFDC1-206ENST00000477485 KRTAP4-11Q9BYQ6 195 aa2.91□□□□□ -1.94
RTFDC1-206ENST00000477485 KMT2DO14686 5537 aa2.9□□□□□ -1.95
RTFDC1-206ENST00000477485 TSTD3H0UI37 97 aa2.89□□□□□ -1.95
RTFDC1-206ENST00000477485 MDN1Q9NU22 5596 aa2.88□□□□□ -1.95
RTFDC1-206ENST00000477485 M0R143 59 aa2.86□□□□□ -1.95
RTFDC1-206ENST00000477485 KRTAP8-1Q8IUC2 63 aa2.86□□□□□ -1.95
RTFDC1-206ENST00000477485 KRTAP2-2Q9BYT5 123 aa2.86□□□□□ -1.95
RTFDC1-206ENST00000477485 KRTAP2-1Q9BYU5 128 aa2.86□□□□□ -1.95
RTFDC1-206ENST00000477485 CRIPTQ9P021 101 aa2.86□□□□□ -1.95
RTFDC1-206ENST00000477485 PRO2289Q9P1D8 64 aa2.86□□□□□ -1.95
RTFDC1-206ENST00000477485 SPRR2DP22532 72 aa2.85□□□□□ -1.95
RTFDC1-206ENST00000477485 BATFQ16520 125 aa2.83□□□□□ -1.96
RTFDC1-206ENST00000477485 A8MUN3 132 aa2.82□□□□□ -1.96
RTFDC1-206ENST00000477485 H3BT86 120 aa2.82□□□□□ -1.96
RTFDC1-206ENST00000477485 LCE1AQ5T7P2 110 aa2.82□□□□□ -1.96
RTFDC1-206ENST00000477485 A0A087WVE0 104 aa2.81□□□□□ -1.96
RTFDC1-206ENST00000477485 PLAC4Q8WY50 150 aa2.81□□□□□ -1.96
RTFDC1-206ENST00000477485 UBL5Q9BZL1 73 aa2.8□□□□□ -1.96
RTFDC1-206ENST00000477485 K7EP34 96 aa2.79□□□□□ -1.96
RTFDC1-206ENST00000477485 NDUFC1O43677 76 aa2.79□□□□□ -1.96
RTFDC1-206ENST00000477485 MT1XP80297 61 aa2.79□□□□□ -1.96
RTFDC1-206ENST00000477485 TP53AIP1Q9HCN2 124 aa2.79□□□□□ -1.96
RTFDC1-206ENST00000477485 ADM2Q7Z4H4 148 aa2.78□□□□□ -1.96
RTFDC1-206ENST00000477485 CYP4F30PQ9H0H9 118 aa2.76□□□□□ -1.97
RTFDC1-206ENST00000477485 A0A1W2PPM0 123 aa2.75□□□□□ -1.97
RTFDC1-206ENST00000477485 H0YAA0 97 aa2.74□□□□□ -1.97
RTFDC1-206ENST00000477485 KRTAP12-2P59991 146 aa2.74□□□□□ -1.97
RTFDC1-206ENST00000477485 SPCS1Q9Y6A9 102 aa2.74□□□□□ -1.97
RTFDC1-206ENST00000477485 R4GN34 69 aa2.74□□□□□ -1.97
RTFDC1-206ENST00000477485 TRAV22A0A0B4J277 110 aa2.73□□□□□ -1.97
RTFDC1-206ENST00000477485 LOC101927531A0A1B0GV80 90 aa2.73□□□□□ -1.97
RTFDC1-206ENST00000477485 ACYP1P07311 99 aa2.72□□□□□ -1.97
RTFDC1-206ENST00000477485 LINC01554Q52M75 96 aa2.72□□□□□ -1.97
RTFDC1-206ENST00000477485 M0QZ58 72 aa2.71□□□□□ -1.98
RTFDC1-206ENST00000477485 TAX1BP3O14907 124 aa2.71□□□□□ -1.98
RTFDC1-206ENST00000477485 H0Y9P7 68 aa2.68□□□□□ -1.98
RTFDC1-206ENST00000477485 KRTAP10-7P60409 375 aaPredicted RBP2.68□□□□□ -1.98
RTFDC1-206ENST00000477485 C20orf197Q8N268 126 aa2.68□□□□□ -1.98
RTFDC1-206ENST00000477485 P0C880 135 aa2.67□□□□□ -1.98
RTFDC1-206ENST00000477485 SMIM6P0DI80 62 aa2.67□□□□□ -1.98
RTFDC1-206ENST00000477485 ATOX1O00244 68 aa2.66□□□□□ -1.98
RTFDC1-206ENST00000477485 UQCRQO14949 82 aa2.64□□□□□ -1.99
RTFDC1-206ENST00000477485 HIST1H4AP62805 103 aaKnown RBP2.64□□□□□ -1.99
RTFDC1-206ENST00000477485 MT-ATP8P03928 68 aa2.63□□□□□ -1.99
RTFDC1-206ENST00000477485 KRTAP10-12P60413 245 aa2.63□□□□□ -1.99
RTFDC1-206ENST00000477485 PRO0461Q9UI25 63 aa2.63□□□□□ -1.99
RTFDC1-206ENST00000477485 LINC00208Q96KT6 92 aa2.62□□□□□ -1.99
RTFDC1-206ENST00000477485 ETDBQ3ZM63 59 aa2.59□□□□□ -1.99
RTFDC1-206ENST00000477485 COL5A1-AS1Q5SY13 56 aa2.58□□□□□ -2
RTFDC1-206ENST00000477485 MP68P56378 58 aa2.57□□□□□ -2
RTFDC1-206ENST00000477485 GTF2H5Q6ZYL4 71 aa2.57□□□□□ -2
RTFDC1-206ENST00000477485 F8W1H4 67 aa2.55□□□□□ -2
RTFDC1-206ENST00000477485 ATP5EP2Q5VTU8 51 aa2.55□□□□□ -2
RTFDC1-206ENST00000477485 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
RTFDC1-206ENST00000477485 DSTQ03001 7570 aaKnown RBP2.54□□□□□ -2
RTFDC1-206ENST00000477485 MT4P47944 62 aa2.52□□□□□ -2.01
RTFDC1-206ENST00000477485 DMAC1Q96GE9 116 aa2.52□□□□□ -2.01
RTFDC1-206ENST00000477485 KRTAP19-3Q7Z4W3 81 aa2.51□□□□□ -2.01
RTFDC1-206ENST00000477485 CAMK2N1Q7Z7J9 78 aa2.51□□□□□ -2.01
RTFDC1-206ENST00000477485 PRAC1Q96KF2 57 aa2.51□□□□□ -2.01
RTFDC1-206ENST00000477485 CYSTM1Q9H1C7 97 aa2.51□□□□□ -2.01
RTFDC1-206ENST00000477485 MT1EP04732 61 aa2.49□□□□□ -2.01
RTFDC1-206ENST00000477485 OCR1Q9BZK8 76 aa2.49□□□□□ -2.01
RTFDC1-206ENST00000477485 KRTAP19-7Q3SYF9 63 aa2.48□□□□□ -2.01
RTFDC1-206ENST00000477485 SPTSSBQ8NFR3 76 aa2.48□□□□□ -2.01
RTFDC1-206ENST00000477485 TRAV7A0A075B6U4 112 aa2.47□□□□□ -2.01
RTFDC1-206ENST00000477485 FAM240AA0A1B0GVK7 77 aa2.47□□□□□ -2.01
RTFDC1-206ENST00000477485 LOC105371267A0A1B0GV96 52 aa2.46□□□□□ -2.02
RTFDC1-206ENST00000477485 H3BPC8 53 aa2.46□□□□□ -2.02
RTFDC1-206ENST00000477485 CHKB-CPT1BH3BT56 60 aa2.46□□□□□ -2.02
RTFDC1-206ENST00000477485 LINC00643Q86TS7 51 aa2.46□□□□□ -2.02
RTFDC1-206ENST00000477485 ACYP2P14621 99 aa2.45□□□□□ -2.02
RTFDC1-206ENST00000477485 SCGB1A1P11684 91 aa2.44□□□□□ -2.02
RTFDC1-206ENST00000477485 PP632Q6XCG6 107 aa2.44□□□□□ -2.02
RTFDC1-206ENST00000477485 A0A0D9SG42 100 aa2.42□□□□□ -2.02
RTFDC1-206ENST00000477485 MT1GP13640 62 aa2.42□□□□□ -2.02
RTFDC1-206ENST00000477485 PCP4L1A6NKN8 68 aa2.41□□□□□ -2.02
RTFDC1-206ENST00000477485 KRTAP19-5Q3LI72 72 aa2.41□□□□□ -2.02
RTFDC1-206ENST00000477485 KRTAP5-10Q6L8G5 202 aa2.41□□□□□ -2.02
RTFDC1-206ENST00000477485 KRTAP13-4Q3LI77 160 aa2.4□□□□□ -2.03
RTFDC1-206ENST00000477485 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.03
RTFDC1-206ENST00000477485 MT1MQ8N339 61 aa2.39□□□□□ -2.03
RTFDC1-206ENST00000477485 SPINT4Q6UDR6 99 aa2.36□□□□□ -2.03
RTFDC1-206ENST00000477485 KRTAP4-3Q9BYR4 195 aa2.36□□□□□ -2.03
RTFDC1-206ENST00000477485 SPRR5A0A1B0GTR4 108 aa2.35□□□□□ -2.03
RTFDC1-206ENST00000477485 MT3P25713 68 aa2.35□□□□□ -2.03
RTFDC1-206ENST00000477485 AHNAK2Q8IVF2 5795 aa2.34□□□□□ -2.03
RTFDC1-206ENST00000477485 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.03
RTFDC1-206ENST00000477485 KRTAP5-4Q6L8H1 288 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms