RNA–Protein interactions for RNA: ENST00000476824.1

ITGA4-208, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,004 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-208ENST00000476824 RNF213Q63HN8 5207 aa1.82□□□□□ -2.12
ITGA4-208ENST00000476824 G3V318 75 aa1.81□□□□□ -2.12
ITGA4-208ENST00000476824 POLR2KP53803 58 aaKnown RBP1.81□□□□□ -2.12
ITGA4-208ENST00000476824 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
ITGA4-208ENST00000476824 LINC00575Q6W349 94 aa1.81□□□□□ -2.12
ITGA4-208ENST00000476824 TP53AIP1Q9HCN2 124 aa1.81□□□□□ -2.12
ITGA4-208ENST00000476824 DMBT1Q9UGM3 2413 aaPredicted RBP1.8□□□□□ -2.12
ITGA4-208ENST00000476824 FAT1Q14517 4588 aa1.8□□□□□ -2.12
ITGA4-208ENST00000476824 GVQW2A0A096LPI5 108 aaPredicted RBP1.8□□□□□ -2.12
ITGA4-208ENST00000476824 LYNX1G3V0Z9 82 aa1.8□□□□□ -2.12
ITGA4-208ENST00000476824 H3BSH0 61 aa1.8□□□□□ -2.12
ITGA4-208ENST00000476824 H0YGG7 62 aa1.79□□□□□ -2.12
ITGA4-208ENST00000476824 PRR9Q5T870 116 aa1.79□□□□□ -2.12
ITGA4-208ENST00000476824 CRIPTQ9P021 101 aa1.79□□□□□ -2.12
ITGA4-208ENST00000476824 SORL1Q92673 2214 aa1.79□□□□□ -2.12
ITGA4-208ENST00000476824 FAT4Q6V0I7 4981 aa1.78□□□□□ -2.12
ITGA4-208ENST00000476824 MUC2Q02817 5179 aa1.78□□□□□ -2.13
ITGA4-208ENST00000476824 PRB3Q04118 309 aaPredicted RBP1.77□□□□□ -2.13
ITGA4-208ENST00000476824 SPINK13Q1W4C9 94 aa1.77□□□□□ -2.13
ITGA4-208ENST00000476824 COX6B2Q6YFQ2 88 aa1.77□□□□□ -2.13
ITGA4-208ENST00000476824 Q6ZRN7 208 aaPredicted RBP1.77□□□□□ -2.13
ITGA4-208ENST00000476824 IGKV2-24A0A0C4DH68 120 aa1.76□□□□□ -2.13
ITGA4-208ENST00000476824 K7EIL1 84 aa1.76□□□□□ -2.13
ITGA4-208ENST00000476824 SRRM2Q9UQ35 2752 aaKnown RBP1.76□□□□□ -2.13
ITGA4-208ENST00000476824 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
ITGA4-208ENST00000476824 LRP2P98164 4655 aa1.76□□□□□ -2.13
ITGA4-208ENST00000476824 K7EQZ3 153 aa1.75□□□□□ -2.13
ITGA4-208ENST00000476824 RPL39P62891 51 aaKnown RBP1.75□□□□□ -2.13
ITGA4-208ENST00000476824 PRCDQ00LT1 54 aa1.75□□□□□ -2.13
ITGA4-208ENST00000476824 MINOS1Q5TGZ0 78 aa1.75□□□□□ -2.13
ITGA4-208ENST00000476824 VPS13BQ7Z7G8 4022 aa1.75□□□□□ -2.13
ITGA4-208ENST00000476824 RPL39LQ96EH5 51 aaKnown RBP1.74□□□□□ -2.13
ITGA4-208ENST00000476824 USMG5Q96IX5 58 aa1.74□□□□□ -2.13
ITGA4-208ENST00000476824 C6orf48Q9UBA6 75 aa1.74□□□□□ -2.13
ITGA4-208ENST00000476824 LRP1Q07954 4544 aaKnown RBP1.73□□□□□ -2.13
ITGA4-208ENST00000476824 IGLV5-48A0A075B6I7 105 aa1.73□□□□□ -2.13
ITGA4-208ENST00000476824 CCL22O00626 93 aa1.73□□□□□ -2.13
ITGA4-208ENST00000476824 RPS27P42677 84 aaKnown RBP1.73□□□□□ -2.13
ITGA4-208ENST00000476824 PIGYQ3MUY2 71 aa1.73□□□□□ -2.13
ITGA4-208ENST00000476824 SPINK9Q5DT21 86 aa1.73□□□□□ -2.13
ITGA4-208ENST00000476824 UBE2DNLQ8IWF7 75 aa1.73□□□□□ -2.13
ITGA4-208ENST00000476824 FAT3Q8TDW7 4589 aa1.72□□□□□ -2.13
ITGA4-208ENST00000476824 KRTAP13-1Q8IUC0 172 aa1.72□□□□□ -2.13
ITGA4-208ENST00000476824 DEFB108BQ8NET1 73 aa1.72□□□□□ -2.13
ITGA4-208ENST00000476824 I3L2K1 104 aa1.71□□□□□ -2.14
ITGA4-208ENST00000476824 MRPL34Q9BQ48 92 aaKnown RBP1.71□□□□□ -2.14
ITGA4-208ENST00000476824 RPL37P61927 97 aaKnown RBP1.7□□□□□ -2.14
ITGA4-208ENST00000476824 PCOTHQ58A44 107 aa1.7□□□□□ -2.14
ITGA4-208ENST00000476824 FLG2Q5D862 2391 aaPredicted RBP1.69□□□□□ -2.14
ITGA4-208ENST00000476824 LYNX1P0DP58 116 aa1.69□□□□□ -2.14
ITGA4-208ENST00000476824 WFDC10BQ8IUB3 73 aa1.69□□□□□ -2.14
ITGA4-208ENST00000476824 WFDC13Q8IUB5 93 aa1.69□□□□□ -2.14
ITGA4-208ENST00000476824 M0QY20 66 aa1.68□□□□□ -2.14
ITGA4-208ENST00000476824 UNQ6190/PRO20217Q6UXQ8 127 aa1.68□□□□□ -2.14
ITGA4-208ENST00000476824 LEAP2Q969E1 77 aa1.68□□□□□ -2.14
ITGA4-208ENST00000476824 PKHD1L1Q86WI1 4243 aa1.67□□□□□ -2.14
ITGA4-208ENST00000476824 H0YAA0 97 aa1.67□□□□□ -2.14
ITGA4-208ENST00000476824 DEFB131AP59861 70 aa1.67□□□□□ -2.14
ITGA4-208ENST00000476824 DNAH8Q96JB1 4490 aa1.67□□□□□ -2.14
ITGA4-208ENST00000476824 TNXBP22105 4242 aa1.66□□□□□ -2.14
ITGA4-208ENST00000476824 BRD3OSQ6XYD6 125 aa1.66□□□□□ -2.14
ITGA4-208ENST00000476824 Q6ZSA8 131 aa1.66□□□□□ -2.14
ITGA4-208ENST00000476824 COX6A2Q02221 97 aa1.65□□□□□ -2.15
ITGA4-208ENST00000476824 TMEM167AQ8TBQ9 72 aa1.64□□□□□ -2.15
ITGA4-208ENST00000476824 FSIP2Q5CZC0 6907 aa1.64□□□□□ -2.15
ITGA4-208ENST00000476824 KRTAP12-3P60328 96 aa1.63□□□□□ -2.15
ITGA4-208ENST00000476824 H1FX-AS1Q4G0G2 97 aa1.63□□□□□ -2.15
ITGA4-208ENST00000476824 KAAG1Q9UBP8 84 aa1.63□□□□□ -2.15
ITGA4-208ENST00000476824 H3BUA1 57 aa1.61□□□□□ -2.15
ITGA4-208ENST00000476824 K7EIM0 57 aa1.61□□□□□ -2.15
ITGA4-208ENST00000476824 DEFB130BP0DP73 79 aa1.61□□□□□ -2.15
ITGA4-208ENST00000476824 DEFB130AP0DP74 79 aa1.61□□□□□ -2.15
ITGA4-208ENST00000476824 WT1-ASQ06250 92 aa1.61□□□□□ -2.15
ITGA4-208ENST00000476824 MMP24-AS1A0A0U1RRL7 71 aa1.6□□□□□ -2.15
ITGA4-208ENST00000476824 KRTAP13-4Q3LI77 160 aa1.6□□□□□ -2.15
ITGA4-208ENST00000476824 KRTAP12-4P60329 112 aa1.59□□□□□ -2.15
ITGA4-208ENST00000476824 C10orf95Q9H7T3 257 aa1.59□□□□□ -2.15
ITGA4-208ENST00000476824 TOMM7Q9P0U1 55 aa1.59□□□□□ -2.15
ITGA4-208ENST00000476824 LPAP08519 4548 aa1.58□□□□□ -2.16
ITGA4-208ENST00000476824 H3BUX3 64 aa1.57□□□□□ -2.16
ITGA4-208ENST00000476824 RPL39P5Q59GN2 51 aa1.57□□□□□ -2.16
ITGA4-208ENST00000476824 KRTAP6-3Q3LI67 103 aa1.56□□□□□ -2.16
ITGA4-208ENST00000476824 LELP1Q5T871 98 aa1.56□□□□□ -2.16
ITGA4-208ENST00000476824 A8MTW9 85 aa1.55□□□□□ -2.16
ITGA4-208ENST00000476824 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
ITGA4-208ENST00000476824 CLPSL2Q6UWE3 100 aa1.55□□□□□ -2.16
ITGA4-208ENST00000476824 DEFB105AQ8NG35 78 aa1.55□□□□□ -2.16
ITGA4-208ENST00000476824 APLNQ9ULZ1 77 aa1.55□□□□□ -2.16
ITGA4-208ENST00000476824 DEFB104AQ8WTQ1 72 aa1.54□□□□□ -2.16
ITGA4-208ENST00000476824 SPRR1AP35321 89 aa1.53□□□□□ -2.16
ITGA4-208ENST00000476824 DEFB136Q30KP8 78 aa1.52□□□□□ -2.17
ITGA4-208ENST00000476824 Q5VSD8 79 aa1.52□□□□□ -2.17
ITGA4-208ENST00000476824 PRO0255Q9UI72 69 aa1.52□□□□□ -2.17
ITGA4-208ENST00000476824 PRLHP81277 87 aa1.51□□□□□ -2.17
ITGA4-208ENST00000476824 SSPOA2VEC9 5147 aa1.5□□□□□ -2.17
ITGA4-208ENST00000476824 KLK9Q2XQG4 91 aa1.5□□□□□ -2.17
ITGA4-208ENST00000476824 CRCT1Q9UGL9 99 aa1.5□□□□□ -2.17
ITGA4-208ENST00000476824 MUC17Q685J3 4493 aa1.48□□□□□ -2.17
ITGA4-208ENST00000476824 USH2AO75445 5202 aa1.48□□□□□ -2.17
ITGA4-208ENST00000476824 KRTAP10-4P60372 401 aaPredicted RBP1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms