RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 A0A1B0GVY2 172 aa2.7□□□□□ -1.98
SPTLC3-205ENST00000476791 KRTAP10-12P60413 245 aa2.7□□□□□ -1.98
SPTLC3-205ENST00000476791 NOTCH3Q9UM47 2321 aa2.7□□□□□ -1.98
SPTLC3-205ENST00000476791 DYNC2H1Q8NCM8 4307 aaKnown RBP2.69□□□□□ -1.98
SPTLC3-205ENST00000476791 SONP18583 2426 aaKnown RBP2.68□□□□□ -1.98
SPTLC3-205ENST00000476791 RYR3Q15413 4870 aa2.67□□□□□ -1.98
SPTLC3-205ENST00000476791 PRO0255Q9UI72 69 aa2.67□□□□□ -1.98
SPTLC3-205ENST00000476791 KRTAP12-1P59990 96 aa2.67□□□□□ -1.98
SPTLC3-205ENST00000476791 TLN2Q9Y4G6 2542 aa2.66□□□□□ -1.98
SPTLC3-205ENST00000476791 DNAH1Q9P2D7 4330 aa2.66□□□□□ -1.98
SPTLC3-205ENST00000476791 MGAM2Q2M2H8 2515 aa2.66□□□□□ -1.98
SPTLC3-205ENST00000476791 CUBNO60494 3623 aa2.65□□□□□ -1.98
SPTLC3-205ENST00000476791 SVEP1Q4LDE5 3571 aa2.65□□□□□ -1.99
SPTLC3-205ENST00000476791 NOTCH1P46531 2555 aa2.64□□□□□ -1.99
SPTLC3-205ENST00000476791 COL7A1Q02388 2944 aa2.64□□□□□ -1.99
SPTLC3-205ENST00000476791 LYSTQ99698 3801 aa2.63□□□□□ -1.99
SPTLC3-205ENST00000476791 HERC2O95714 4834 aa2.62□□□□□ -1.99
SPTLC3-205ENST00000476791 SPINK6Q6UWN8 80 aa2.62□□□□□ -1.99
SPTLC3-205ENST00000476791 PKD1L1Q8TDX9 2849 aa2.62□□□□□ -1.99
SPTLC3-205ENST00000476791 KRTAP10-1P60331 282 aa2.62□□□□□ -1.99
SPTLC3-205ENST00000476791 ZNF469Q96JG9 3925 aaPredicted RBP2.62□□□□□ -1.99
SPTLC3-205ENST00000476791 LCE3CQ5T5A8 94 aa2.61□□□□□ -1.99
SPTLC3-205ENST00000476791 NBEAL2Q6ZNJ1 2754 aa2.6□□□□□ -1.99
SPTLC3-205ENST00000476791 DNAH11Q96DT5 4516 aa2.6□□□□□ -1.99
SPTLC3-205ENST00000476791 KMT2CQ8NEZ4 4911 aaKnown RBP2.6□□□□□ -1.99
SPTLC3-205ENST00000476791 KRTAP5-9P26371 169 aa2.6□□□□□ -1.99
SPTLC3-205ENST00000476791 PRKDCP78527 4128 aaKnown RBP2.59□□□□□ -1.99
SPTLC3-205ENST00000476791 KRTAP9-6A8MVA2 160 aa2.59□□□□□ -2
SPTLC3-205ENST00000476791 VPS13DQ5THJ4 4388 aa2.59□□□□□ -2
SPTLC3-205ENST00000476791 KRTAP10-3P60369 221 aa2.58□□□□□ -2
SPTLC3-205ENST00000476791 RYR2Q92736 4967 aa2.57□□□□□ -2
SPTLC3-205ENST00000476791 TRRAPQ9Y4A5 3859 aa2.56□□□□□ -2
SPTLC3-205ENST00000476791 TGP01266 2768 aa2.56□□□□□ -2
SPTLC3-205ENST00000476791 DNAH8Q96JB1 4490 aa2.55□□□□□ -2
SPTLC3-205ENST00000476791 MYCBP2O75592 4640 aa2.55□□□□□ -2
SPTLC3-205ENST00000476791 KRTAP1-4P0C5Y4 121 aa2.54□□□□□ -2
SPTLC3-205ENST00000476791 PCLOQ9Y6V0 5065 aa2.54□□□□□ -2
SPTLC3-205ENST00000476791 FRAS1Q86XX4 4008 aa2.54□□□□□ -2
SPTLC3-205ENST00000476791 H3BUX3 64 aa2.53□□□□□ -2
SPTLC3-205ENST00000476791 HRNRQ86YZ3 2850 aaPredicted RBP2.53□□□□□ -2
SPTLC3-205ENST00000476791 ZANQ9Y493 2812 aa2.52□□□□□ -2.01
SPTLC3-205ENST00000476791 SACSQ9NZJ4 4579 aa2.52□□□□□ -2.01
SPTLC3-205ENST00000476791 VPS13CQ709C8 3753 aa2.51□□□□□ -2.01
SPTLC3-205ENST00000476791 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
SPTLC3-205ENST00000476791 EPPK1P58107 5090 aaKnown RBP2.51□□□□□ -2.01
SPTLC3-205ENST00000476791 CMYA5Q8N3K9 4069 aa2.5□□□□□ -2.01
SPTLC3-205ENST00000476791 DNAH3Q8TD57 4116 aa2.5□□□□□ -2.01
SPTLC3-205ENST00000476791 Q5VSD8 79 aa2.49□□□□□ -2.01
SPTLC3-205ENST00000476791 DNAH9Q9NYC9 4486 aa2.48□□□□□ -2.01
SPTLC3-205ENST00000476791 TENM1Q9UKZ4 2725 aa2.48□□□□□ -2.01
SPTLC3-205ENST00000476791 TENM3Q9P273 2699 aa2.48□□□□□ -2.01
SPTLC3-205ENST00000476791 KRTAP10-10P60014 251 aa2.46□□□□□ -2.02
SPTLC3-205ENST00000476791 KRTAP5-4Q6L8H1 288 aa2.46□□□□□ -2.02
SPTLC3-205ENST00000476791 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
SPTLC3-205ENST00000476791 HYDINQ4G0P3 5121 aa2.45□□□□□ -2.02
SPTLC3-205ENST00000476791 KRTAP13-1Q8IUC0 172 aa2.44□□□□□ -2.02
SPTLC3-205ENST00000476791 DNAH7Q8WXX0 4024 aa2.42□□□□□ -2.02
SPTLC3-205ENST00000476791 DNAH6Q9C0G6 4158 aa2.42□□□□□ -2.02
SPTLC3-205ENST00000476791 KRTAP6-3Q3LI67 103 aa2.41□□□□□ -2.02
SPTLC3-205ENST00000476791 DNAH10Q8IVF4 4471 aa2.41□□□□□ -2.02
SPTLC3-205ENST00000476791 DYNC1H1Q14204 4646 aaKnown RBP2.39□□□□□ -2.03
SPTLC3-205ENST00000476791 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
SPTLC3-205ENST00000476791 HECTD4Q9Y4D8 3996 aa2.38□□□□□ -2.03
SPTLC3-205ENST00000476791 PLECQ15149 4684 aaKnown RBP2.37□□□□□ -2.03
SPTLC3-205ENST00000476791 RYR1P21817 5038 aa2.37□□□□□ -2.03
SPTLC3-205ENST00000476791 HUWE1Q7Z6Z7 4374 aaKnown RBP2.37□□□□□ -2.03
SPTLC3-205ENST00000476791 KIAA1109Q2LD37 5005 aa2.35□□□□□ -2.03
SPTLC3-205ENST00000476791 DNAH17Q9UFH2 4485 aa2.35□□□□□ -2.03
SPTLC3-205ENST00000476791 M0QZ58 72 aa2.34□□□□□ -2.03
SPTLC3-205ENST00000476791 DEFB4AO15263 64 aa2.34□□□□□ -2.03
SPTLC3-205ENST00000476791 HTN3P15516 51 aa2.34□□□□□ -2.03
SPTLC3-205ENST00000476791 LRP1BQ9NZR2 4599 aa2.33□□□□□ -2.04
SPTLC3-205ENST00000476791 FAT2Q9NYQ8 4349 aa2.33□□□□□ -2.04
SPTLC3-205ENST00000476791 KMT2AQ03164 3969 aa2.31□□□□□ -2.04
SPTLC3-205ENST00000476791 ABCA13Q86UQ4 5058 aa2.31□□□□□ -2.04
SPTLC3-205ENST00000476791 STAB2Q8WWQ8 2551 aa2.3□□□□□ -2.04
SPTLC3-205ENST00000476791 LINC01556Q5JQF7 62 aa2.29□□□□□ -2.04
SPTLC3-205ENST00000476791 DNAH2Q9P225 4427 aa2.29□□□□□ -2.04
SPTLC3-205ENST00000476791 PKHD1P08F94 4074 aa2.27□□□□□ -2.05
SPTLC3-205ENST00000476791 STARD9Q9P2P6 4700 aa2.27□□□□□ -2.05
SPTLC3-205ENST00000476791 KRTAP4-3Q9BYR4 195 aa2.27□□□□□ -2.05
SPTLC3-205ENST00000476791 SPART-AS1P0CW21 52 aa2.26□□□□□ -2.05
SPTLC3-205ENST00000476791 HSPG2P98160 4391 aa2.25□□□□□ -2.05
SPTLC3-205ENST00000476791 VPS13BQ7Z7G8 4022 aa2.23□□□□□ -2.05
SPTLC3-205ENST00000476791 DEFB135Q30KP9 77 aa2.23□□□□□ -2.05
SPTLC3-205ENST00000476791 KRTAP12-4P60329 112 aa2.23□□□□□ -2.05
SPTLC3-205ENST00000476791 APOBP04114 4563 aaKnown RBP2.22□□□□□ -2.05
SPTLC3-205ENST00000476791 LCE3AQ5TA76 89 aa2.22□□□□□ -2.05
SPTLC3-205ENST00000476791 OBSCNQ5VST9 7968 aa2.22□□□□□ -2.05
SPTLC3-205ENST00000476791 PKHD1L1Q86WI1 4243 aa2.21□□□□□ -2.06
SPTLC3-205ENST00000476791 UBR4Q5T4S7 5183 aa2.2□□□□□ -2.06
SPTLC3-205ENST00000476791 KRTAP5-5Q701N2 237 aaPredicted RBP2.2□□□□□ -2.06
SPTLC3-205ENST00000476791 HERC1Q15751 4861 aa2.19□□□□□ -2.06
SPTLC3-205ENST00000476791 HMCN2Q8NDA2 5059 aa2.19□□□□□ -2.06
SPTLC3-205ENST00000476791 KRTAP5-2Q701N4 177 aa2.18□□□□□ -2.06
SPTLC3-205ENST00000476791 H3BNG1 76 aa2.17□□□□□ -2.06
SPTLC3-205ENST00000476791 PKD1P98161 4303 aa2.17□□□□□ -2.06
SPTLC3-205ENST00000476791 C9orf92A6NGG3 77 aa2.15□□□□□ -2.06
SPTLC3-205ENST00000476791 CRCT1Q9UGL9 99 aa2.15□□□□□ -2.06
SPTLC3-205ENST00000476791 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms