RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 LCE2CQ5TA81 110 aa1.71□□□□□ -2.14
LSM2-211ENST00000475835 LCE2DQ5TA82 110 aaPredicted RBP1.71□□□□□ -2.14
LSM2-211ENST00000475835 DYNC2H1Q8NCM8 4307 aaKnown RBP1.71□□□□□ -2.14
LSM2-211ENST00000475835 DNAH17Q9UFH2 4485 aa1.71□□□□□ -2.14
LSM2-211ENST00000475835 DNAH11Q96DT5 4516 aa1.68□□□□□ -2.14
LSM2-211ENST00000475835 DNAH8Q96JB1 4490 aa1.68□□□□□ -2.14
LSM2-211ENST00000475835 LORP23490 312 aaPredicted RBP1.67□□□□□ -2.14
LSM2-211ENST00000475835 CSMD3Q7Z407 3707 aa1.66□□□□□ -2.14
LSM2-211ENST00000475835 KRTAP10-4P60372 401 aaPredicted RBP1.66□□□□□ -2.14
LSM2-211ENST00000475835 DNAH7Q8WXX0 4024 aa1.65□□□□□ -2.15
LSM2-211ENST00000475835 LYSTQ99698 3801 aa1.65□□□□□ -2.15
LSM2-211ENST00000475835 PLECQ15149 4684 aaKnown RBP1.65□□□□□ -2.15
LSM2-211ENST00000475835 HECTD4Q9Y4D8 3996 aa1.64□□□□□ -2.15
LSM2-211ENST00000475835 STARD9Q9P2P6 4700 aa1.64□□□□□ -2.15
LSM2-211ENST00000475835 DNAH6Q9C0G6 4158 aa1.64□□□□□ -2.15
LSM2-211ENST00000475835 PRKDCP78527 4128 aaKnown RBP1.63□□□□□ -2.15
LSM2-211ENST00000475835 DMBT1Q9UGM3 2413 aaPredicted RBP1.62□□□□□ -2.15
LSM2-211ENST00000475835 TNP1P09430 55 aa1.62□□□□□ -2.15
LSM2-211ENST00000475835 KRTAP10-10P60014 251 aa1.62□□□□□ -2.15
LSM2-211ENST00000475835 KRTAP2-2Q9BYT5 123 aa1.62□□□□□ -2.15
LSM2-211ENST00000475835 FRAS1Q86XX4 4008 aa1.61□□□□□ -2.15
LSM2-211ENST00000475835 DNAH2Q9P225 4427 aa1.6□□□□□ -2.15
LSM2-211ENST00000475835 KRTAP19-4Q3LI73 84 aa1.6□□□□□ -2.15
LSM2-211ENST00000475835 LCE2BO14633 110 aa1.59□□□□□ -2.15
LSM2-211ENST00000475835 MYCBP2O75592 4640 aa1.59□□□□□ -2.16
LSM2-211ENST00000475835 SACSQ9NZJ4 4579 aa1.58□□□□□ -2.16
LSM2-211ENST00000475835 KRTAP21-3Q3LHN1 58 aa1.58□□□□□ -2.16
LSM2-211ENST00000475835 DNAH5Q8TE73 4624 aa1.58□□□□□ -2.16
LSM2-211ENST00000475835 PKD1P98161 4303 aa1.58□□□□□ -2.16
LSM2-211ENST00000475835 KMT2AQ03164 3969 aa1.56□□□□□ -2.16
LSM2-211ENST00000475835 LRP1BQ9NZR2 4599 aa1.55□□□□□ -2.16
LSM2-211ENST00000475835 MT1HL1P0DM35 61 aa1.54□□□□□ -2.16
LSM2-211ENST00000475835 PKHD1P08F94 4074 aa1.52□□□□□ -2.17
LSM2-211ENST00000475835 VPS13BQ7Z7G8 4022 aa1.51□□□□□ -2.17
LSM2-211ENST00000475835 APOBP04114 4563 aaKnown RBP1.51□□□□□ -2.17
LSM2-211ENST00000475835 FAT2Q9NYQ8 4349 aa1.51□□□□□ -2.17
LSM2-211ENST00000475835 PKHD1L1Q86WI1 4243 aa1.51□□□□□ -2.17
LSM2-211ENST00000475835 LCE5AQ5TCM9 118 aa1.5□□□□□ -2.17
LSM2-211ENST00000475835 DYNC1H1Q14204 4646 aaKnown RBP1.49□□□□□ -2.17
LSM2-211ENST00000475835 FLGP20930 4061 aaPredicted RBP1.47□□□□□ -2.17
LSM2-211ENST00000475835 MT3P25713 68 aa1.47□□□□□ -2.17
LSM2-211ENST00000475835 FAT1Q14517 4588 aa1.47□□□□□ -2.17
LSM2-211ENST00000475835 FAT3Q8TDW7 4589 aa1.46□□□□□ -2.18
LSM2-211ENST00000475835 KRTAP17-1Q9BYP8 105 aa1.46□□□□□ -2.18
LSM2-211ENST00000475835 HYDINQ4G0P3 5121 aa1.46□□□□□ -2.18
LSM2-211ENST00000475835 TNXBP22105 4242 aa1.45□□□□□ -2.18
LSM2-211ENST00000475835 LRP1Q07954 4544 aaKnown RBP1.45□□□□□ -2.18
LSM2-211ENST00000475835 KRTAP4-1Q9BYQ7 146 aa1.44□□□□□ -2.18
LSM2-211ENST00000475835 KRTAP12-4P60329 112 aa1.43□□□□□ -2.18
LSM2-211ENST00000475835 KRTAP8-1Q8IUC2 63 aa1.43□□□□□ -2.18
LSM2-211ENST00000475835 HSPG2P98160 4391 aa1.43□□□□□ -2.18
LSM2-211ENST00000475835 M0R2T5 61 aa1.41□□□□□ -2.18
LSM2-211ENST00000475835 KRTAP2-3P0C7H8 128 aa1.41□□□□□ -2.18
LSM2-211ENST00000475835 KRTAP10-12P60413 245 aa1.41□□□□□ -2.18
LSM2-211ENST00000475835 KRTAP6-3Q3LI67 103 aa1.41□□□□□ -2.18
LSM2-211ENST00000475835 KRTAP2-4Q9BYR9 128 aa1.41□□□□□ -2.18
LSM2-211ENST00000475835 KRTAP2-1Q9BYU5 128 aa1.41□□□□□ -2.18
LSM2-211ENST00000475835 KRTAP9-6A0A140TA67 174 aa1.4□□□□□ -2.19
LSM2-211ENST00000475835 KRTAP19-2Q3LHN2 52 aa1.4□□□□□ -2.19
LSM2-211ENST00000475835 KRTAP4-5Q9BYR2 181 aa1.4□□□□□ -2.19
LSM2-211ENST00000475835 LCE1AQ5T7P2 110 aa1.39□□□□□ -2.19
LSM2-211ENST00000475835 DNHD1Q96M86 4753 aa1.38□□□□□ -2.19
LSM2-211ENST00000475835 RYR2Q92736 4967 aa1.38□□□□□ -2.19
LSM2-211ENST00000475835 LCE3AQ5TA76 89 aa1.36□□□□□ -2.19
LSM2-211ENST00000475835 KRTAP10-5P60370 271 aa1.35□□□□□ -2.19
LSM2-211ENST00000475835 SPRR2GQ9BYE4 73 aa1.35□□□□□ -2.19
LSM2-211ENST00000475835 RYR1P21817 5038 aa1.34□□□□□ -2.19
LSM2-211ENST00000475835 LCE1FQ5T754 118 aa1.34□□□□□ -2.19
LSM2-211ENST00000475835 LRP2P98164 4655 aa1.33□□□□□ -2.2
LSM2-211ENST00000475835 KRTAP19-1Q8IUB9 90 aa1.32□□□□□ -2.2
LSM2-211ENST00000475835 MUC17Q685J3 4493 aa1.31□□□□□ -2.2
LSM2-211ENST00000475835 KRTAP12-3P60328 96 aa1.31□□□□□ -2.2
LSM2-211ENST00000475835 LCE1EQ5T753 118 aa1.31□□□□□ -2.2
LSM2-211ENST00000475835 KRTAP9-4Q9BYQ2 154 aa1.31□□□□□ -2.2
LSM2-211ENST00000475835 KMT2CQ8NEZ4 4911 aaKnown RBP1.31□□□□□ -2.2
LSM2-211ENST00000475835 MT2AP02795 61 aa1.3□□□□□ -2.2
LSM2-211ENST00000475835 KIAA1109Q2LD37 5005 aa1.3□□□□□ -2.2
LSM2-211ENST00000475835 LPAP08519 4548 aa1.3□□□□□ -2.2
LSM2-211ENST00000475835 MT1FP04733 61 aa1.29□□□□□ -2.2
LSM2-211ENST00000475835 MT1HP80294 61 aa1.29□□□□□ -2.2
LSM2-211ENST00000475835 KRTAP19-8Q3LI54 63 aa1.29□□□□□ -2.2
LSM2-211ENST00000475835 RYR3Q15413 4870 aa1.29□□□□□ -2.2
LSM2-211ENST00000475835 KRTAP10-7P60409 375 aaPredicted RBP1.27□□□□□ -2.21
LSM2-211ENST00000475835 LCE3CQ5T5A8 94 aa1.27□□□□□ -2.21
LSM2-211ENST00000475835 LCE1DQ5T752 114 aa1.27□□□□□ -2.21
LSM2-211ENST00000475835 MT1BP07438 61 aa1.26□□□□□ -2.21
LSM2-211ENST00000475835 MT1XP80297 61 aa1.26□□□□□ -2.21
LSM2-211ENST00000475835 HERC1Q15751 4861 aa1.26□□□□□ -2.21
LSM2-211ENST00000475835 KRTAP9-8Q9BYQ0 159 aa1.24□□□□□ -2.21
LSM2-211ENST00000475835 BIRC6Q9NR09 4857 aa1.21□□□□□ -2.22
LSM2-211ENST00000475835 KRTAP19-5Q3LI72 72 aa1.21□□□□□ -2.22
LSM2-211ENST00000475835 ABCA13Q86UQ4 5058 aa1.2□□□□□ -2.22
LSM2-211ENST00000475835 KRTAP9-9Q9BYP9 154 aa1.19□□□□□ -2.22
LSM2-211ENST00000475835 KRTAP9-3Q9BYQ3 159 aa1.19□□□□□ -2.22
LSM2-211ENST00000475835 EPPK1P58107 5090 aaKnown RBP1.18□□□□□ -2.22
LSM2-211ENST00000475835 PRM1P04553 51 aa1.17□□□□□ -2.22
LSM2-211ENST00000475835 KRTAP9-7A8MTY7 169 aa1.15□□□□□ -2.23
LSM2-211ENST00000475835 KRTAP9-6A8MVA2 160 aa1.15□□□□□ -2.23
LSM2-211ENST00000475835 KRTAP9-2Q9BYQ4 174 aa1.14□□□□□ -2.23
LSM2-211ENST00000475835 HERC2O95714 4834 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms