RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 DYNC1H1Q14204 4646 aaKnown RBP0.76□□□□□ -2.29
SMC5-203ENST00000475540 DNAH9Q9NYC9 4486 aa0.75□□□□□ -2.29
SMC5-203ENST00000475540 DNAH7Q8WXX0 4024 aa0.75□□□□□ -2.29
SMC5-203ENST00000475540 FAT2Q9NYQ8 4349 aa0.75□□□□□ -2.29
SMC5-203ENST00000475540 LRP1BQ9NZR2 4599 aa0.74□□□□□ -2.29
SMC5-203ENST00000475540 PRXQ9BXM0 1461 aa0.74□□□□□ -2.29
SMC5-203ENST00000475540 ANK3Q12955 4377 aaKnown RBP0.74□□□□□ -2.29
SMC5-203ENST00000475540 HUWE1Q7Z6Z7 4374 aaKnown RBP0.73□□□□□ -2.29
SMC5-203ENST00000475540 LRP1Q07954 4544 aaKnown RBP0.72□□□□□ -2.29
SMC5-203ENST00000475540 ALMS1Q8TCU4 4167 aa0.72□□□□□ -2.29
SMC5-203ENST00000475540 ATXN8Q156A1 80 aa0.72□□□□□ -2.29
SMC5-203ENST00000475540 DUOX1Q9NRD9 1551 aa0.71□□□□□ -2.3
SMC5-203ENST00000475540 PLECQ15149 4684 aaKnown RBP0.71□□□□□ -2.3
SMC5-203ENST00000475540 LOC730098B7Z3J9 87 aa0.71□□□□□ -2.3
SMC5-203ENST00000475540 HILPDAQ9Y5L2 63 aa0.71□□□□□ -2.3
SMC5-203ENST00000475540 WNK2Q9Y3S1 2297 aa0.71□□□□□ -2.3
SMC5-203ENST00000475540 PKD1P98161 4303 aa0.7□□□□□ -2.3
SMC5-203ENST00000475540 NFAT5O94916 1531 aa0.7□□□□□ -2.3
SMC5-203ENST00000475540 NDUFA3O95167 84 aa0.7□□□□□ -2.3
SMC5-203ENST00000475540 KRTAP21-1Q3LI58 79 aa0.7□□□□□ -2.3
SMC5-203ENST00000475540 WFDC13Q8IUB5 93 aa0.7□□□□□ -2.3
SMC5-203ENST00000475540 A0A1B0GUL6 1792 aa0.7□□□□□ -2.3
SMC5-203ENST00000475540 FAT1Q14517 4588 aa0.69□□□□□ -2.3
SMC5-203ENST00000475540 SMIM31A0A1B0GVY4 71 aa0.69□□□□□ -2.3
SMC5-203ENST00000475540 GNG13Q9P2W3 67 aa0.69□□□□□ -2.3
SMC5-203ENST00000475540 HRNRQ86YZ3 2850 aaPredicted RBP0.69□□□□□ -2.3
SMC5-203ENST00000475540 PKHD1L1Q86WI1 4243 aa0.67□□□□□ -2.3
SMC5-203ENST00000475540 MRPL33O75394 65 aaKnown RBP0.67□□□□□ -2.3
SMC5-203ENST00000475540 C3orf79P0CE67 100 aa0.67□□□□□ -2.3
SMC5-203ENST00000475540 UBL5Q9BZL1 73 aa0.67□□□□□ -2.3
SMC5-203ENST00000475540 STARD9Q9P2P6 4700 aa0.65□□□□□ -2.31
SMC5-203ENST00000475540 ENHOQ6UWT2 76 aa0.65□□□□□ -2.31
SMC5-203ENST00000475540 KCNQ1DNQ9H478 68 aa0.65□□□□□ -2.31
SMC5-203ENST00000475540 DNAH6Q9C0G6 4158 aa0.64□□□□□ -2.31
SMC5-203ENST00000475540 DEFB131BA0A096LNP1 70 aa0.64□□□□□ -2.31
SMC5-203ENST00000475540 DNAH10Q8IVF4 4471 aa0.64□□□□□ -2.31
SMC5-203ENST00000475540 DEFB124Q8NES8 71 aa0.63□□□□□ -2.31
SMC5-203ENST00000475540 APOBP04114 4563 aaKnown RBP0.62□□□□□ -2.31
SMC5-203ENST00000475540 A0A087WWC5 75 aa0.62□□□□□ -2.31
SMC5-203ENST00000475540 PHGR1C9JFL3 82 aa0.62□□□□□ -2.31
SMC5-203ENST00000475540 GCC2Q8IWJ2 1684 aa0.62□□□□□ -2.31
SMC5-203ENST00000475540 LINC00158P58513 81 aa0.61□□□□□ -2.31
SMC5-203ENST00000475540 DNAH5Q8TE73 4624 aa0.61□□□□□ -2.31
SMC5-203ENST00000475540 VPS13DQ5THJ4 4388 aa0.6□□□□□ -2.31
SMC5-203ENST00000475540 DNAH3Q8TD57 4116 aa0.6□□□□□ -2.31
SMC5-203ENST00000475540 DNAH11Q96DT5 4516 aa0.6□□□□□ -2.31
SMC5-203ENST00000475540 VPS13BQ7Z7G8 4022 aa0.59□□□□□ -2.32
SMC5-203ENST00000475540 LPAP08519 4548 aa0.56□□□□□ -2.32
SMC5-203ENST00000475540 ETDCA0A1B0GVM5 59 aa0.56□□□□□ -2.32
SMC5-203ENST00000475540 M0R2T5 61 aa0.56□□□□□ -2.32
SMC5-203ENST00000475540 DEFB114Q30KQ6 69 aa0.56□□□□□ -2.32
SMC5-203ENST00000475540 KRTAP19-6Q3LI70 58 aa0.56□□□□□ -2.32
SMC5-203ENST00000475540 DNAH2Q9P225 4427 aa0.55□□□□□ -2.32
SMC5-203ENST00000475540 DNAH17Q9UFH2 4485 aa0.55□□□□□ -2.32
SMC5-203ENST00000475540 TNXBP22105 4242 aa0.55□□□□□ -2.32
SMC5-203ENST00000475540 H0YAA0 97 aa0.54□□□□□ -2.32
SMC5-203ENST00000475540 PRM1P04553 51 aa0.54□□□□□ -2.32
SMC5-203ENST00000475540 LYNX1G3V0Z9 82 aa0.53□□□□□ -2.32
SMC5-203ENST00000475540 S100ZQ8WXG8 99 aa0.53□□□□□ -2.32
SMC5-203ENST00000475540 SYNE1Q8NF91 8797 aaKnown RBP0.52□□□□□ -2.33
SMC5-203ENST00000475540 LINC01549A6NIU2 74 aa0.52□□□□□ -2.33
SMC5-203ENST00000475540 DEFB135Q30KP9 77 aa0.52□□□□□ -2.33
SMC5-203ENST00000475540 MUC17Q685J3 4493 aa0.5□□□□□ -2.33
SMC5-203ENST00000475540 SPRR2EP22531 72 aa0.49□□□□□ -2.33
SMC5-203ENST00000475540 SPRR2BP35325 72 aa0.49□□□□□ -2.33
SMC5-203ENST00000475540 SPRR2AP35326 72 aa0.49□□□□□ -2.33
SMC5-203ENST00000475540 CRIP1P50238 77 aa0.49□□□□□ -2.33
SMC5-203ENST00000475540 SPRR2DP22532 72 aa0.48□□□□□ -2.33
SMC5-203ENST00000475540 MT4P47944 62 aa0.47□□□□□ -2.33
SMC5-203ENST00000475540 IAPPP10997 89 aa0.46□□□□□ -2.34
SMC5-203ENST00000475540 SFTA3P0C7M3 94 aa0.45□□□□□ -2.34
SMC5-203ENST00000475540 DNAH8Q96JB1 4490 aa0.44□□□□□ -2.34
SMC5-203ENST00000475540 H0YGG7 62 aa0.43□□□□□ -2.34
SMC5-203ENST00000475540 K7EMI3 77 aa0.42□□□□□ -2.34
SMC5-203ENST00000475540 DEFB130BP0DP73 79 aa0.42□□□□□ -2.34
SMC5-203ENST00000475540 DEFB130AP0DP74 79 aa0.42□□□□□ -2.34
SMC5-203ENST00000475540 SMR3BP02814 79 aaPredicted RBP0.41□□□□□ -2.34
SMC5-203ENST00000475540 FLGP20930 4061 aaPredicted RBP0.4□□□□□ -2.34
SMC5-203ENST00000475540 ANKRD36CQ5JPF3 1778 aa0.4□□□□□ -2.35
SMC5-203ENST00000475540 NCBP2-AS2Q69YL0 99 aa0.39□□□□□ -2.35
SMC5-203ENST00000475540 SERF2P84101 59 aa0.38□□□□□ -2.35
SMC5-203ENST00000475540 MT1HL1P0DM35 61 aa0.37□□□□□ -2.35
SMC5-203ENST00000475540 MINOS1Q5TGZ0 78 aa0.37□□□□□ -2.35
SMC5-203ENST00000475540 SPRR2FQ96RM1 72 aa0.37□□□□□ -2.35
SMC5-203ENST00000475540 MT1HP80294 61 aa0.35□□□□□ -2.35
SMC5-203ENST00000475540 NMES1Q9C002 83 aa0.35□□□□□ -2.35
SMC5-203ENST00000475540 M0R1W7 72 aa0.33□□□□□ -2.36
SMC5-203ENST00000475540 FCER1GP30273 86 aa0.33□□□□□ -2.36
SMC5-203ENST00000475540 KRTAP20-2Q3LI61 65 aa0.33□□□□□ -2.36
SMC5-203ENST00000475540 DEFB104AQ8WTQ1 72 aa0.32□□□□□ -2.36
SMC5-203ENST00000475540 C6orf48Q9UBA6 75 aa0.31□□□□□ -2.36
SMC5-203ENST00000475540 PRLHP81277 87 aa0.3□□□□□ -2.36
SMC5-203ENST00000475540 TFF3Q07654 80 aa0.29□□□□□ -2.36
SMC5-203ENST00000475540 KRTAP19-2Q3LHN2 52 aa0.29□□□□□ -2.36
SMC5-203ENST00000475540 RPS27P42677 84 aaKnown RBP0.28□□□□□ -2.36
SMC5-203ENST00000475540 RPS27LQ71UM5 84 aaKnown RBP0.28□□□□□ -2.36
SMC5-203ENST00000475540 WT1-ASQ06250 92 aa0.27□□□□□ -2.37
SMC5-203ENST00000475540 DEFB106AQ8N104 65 aa0.27□□□□□ -2.37
SMC5-203ENST00000475540 S4R3F8 94 aa0.26□□□□□ -2.37
SMC5-203ENST00000475540 IGIPA6NJ69 53 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms