RNA–Protein interactions for RNA: ENST00000473282.6

CDK5RAP2-209, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 5,956 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-209ENST00000473282 CRCT1Q9UGL9 99 aa3.51□□□□□ -1.85
CDK5RAP2-209ENST00000473282 KRTAP12-3P60328 96 aa3.49□□□□□ -1.85
CDK5RAP2-209ENST00000473282 DNAH3Q8TD57 4116 aa3.49□□□□□ -1.85
CDK5RAP2-209ENST00000473282 KRTAP10-4P60372 401 aaPredicted RBP3.49□□□□□ -1.85
CDK5RAP2-209ENST00000473282 DNHD1Q96M86 4753 aa3.49□□□□□ -1.85
CDK5RAP2-209ENST00000473282 DNAH1Q9P2D7 4330 aa3.46□□□□□ -1.86
CDK5RAP2-209ENST00000473282 KRTAP10-12P60413 245 aa3.45□□□□□ -1.86
CDK5RAP2-209ENST00000473282 ZNF469Q96JG9 3925 aaPredicted RBP3.45□□□□□ -1.86
CDK5RAP2-209ENST00000473282 SRRM2Q9UQ35 2752 aaKnown RBP3.45□□□□□ -1.86
CDK5RAP2-209ENST00000473282 CMYA5Q8N3K9 4069 aa3.42□□□□□ -1.86
CDK5RAP2-209ENST00000473282 DNAH10Q8IVF4 4471 aa3.37□□□□□ -1.87
CDK5RAP2-209ENST00000473282 LCE3AQ5TA76 89 aa3.37□□□□□ -1.87
CDK5RAP2-209ENST00000473282 COL7A1Q02388 2944 aa3.35□□□□□ -1.87
CDK5RAP2-209ENST00000473282 DNAH2Q9P225 4427 aa3.35□□□□□ -1.87
CDK5RAP2-209ENST00000473282 DNAH17Q9UFH2 4485 aa3.34□□□□□ -1.87
CDK5RAP2-209ENST00000473282 ANK2Q01484 3957 aa3.34□□□□□ -1.87
CDK5RAP2-209ENST00000473282 PLECQ15149 4684 aaKnown RBP3.34□□□□□ -1.87
CDK5RAP2-209ENST00000473282 VPS13DQ5THJ4 4388 aa3.33□□□□□ -1.88
CDK5RAP2-209ENST00000473282 DNAH6Q9C0G6 4158 aa3.33□□□□□ -1.88
CDK5RAP2-209ENST00000473282 BIRC6Q9NR09 4857 aa3.33□□□□□ -1.88
CDK5RAP2-209ENST00000473282 CSMD3Q7Z407 3707 aa3.33□□□□□ -1.88
CDK5RAP2-209ENST00000473282 DNAH11Q96DT5 4516 aa3.32□□□□□ -1.88
CDK5RAP2-209ENST00000473282 LORP23490 312 aaPredicted RBP3.32□□□□□ -1.88
CDK5RAP2-209ENST00000473282 DNAH7Q8WXX0 4024 aa3.28□□□□□ -1.88
CDK5RAP2-209ENST00000473282 FAT2Q9NYQ8 4349 aa3.27□□□□□ -1.89
CDK5RAP2-209ENST00000473282 DYNC2H1Q8NCM8 4307 aaKnown RBP3.26□□□□□ -1.89
CDK5RAP2-209ENST00000473282 DNAH5Q8TE73 4624 aa3.26□□□□□ -1.89
CDK5RAP2-209ENST00000473282 PRKDCP78527 4128 aaKnown RBP3.25□□□□□ -1.89
CDK5RAP2-209ENST00000473282 STARD9Q9P2P6 4700 aa3.25□□□□□ -1.89
CDK5RAP2-209ENST00000473282 DNAH8Q96JB1 4490 aa3.24□□□□□ -1.89
CDK5RAP2-209ENST00000473282 FRAS1Q86XX4 4008 aa3.23□□□□□ -1.89
CDK5RAP2-209ENST00000473282 KRTAP17-1Q9BYP8 105 aa3.21□□□□□ -1.9
CDK5RAP2-209ENST00000473282 KRTAP4-1Q9BYQ7 146 aa3.2□□□□□ -1.9
CDK5RAP2-209ENST00000473282 KMT2AQ03164 3969 aa3.2□□□□□ -1.9
CDK5RAP2-209ENST00000473282 LRP1BQ9NZR2 4599 aa3.17□□□□□ -1.9
CDK5RAP2-209ENST00000473282 DYNC1H1Q14204 4646 aaKnown RBP3.17□□□□□ -1.9
CDK5RAP2-209ENST00000473282 SACSQ9NZJ4 4579 aa3.17□□□□□ -1.9
CDK5RAP2-209ENST00000473282 MT1HP80294 61 aa3.16□□□□□ -1.9
CDK5RAP2-209ENST00000473282 KRTAP12-4P60329 112 aa3.15□□□□□ -1.91
CDK5RAP2-209ENST00000473282 KRTAP8-1Q8IUC2 63 aa3.14□□□□□ -1.91
CDK5RAP2-209ENST00000473282 VPS13BQ7Z7G8 4022 aa3.14□□□□□ -1.91
CDK5RAP2-209ENST00000473282 SPRR5A0A1B0GTR4 108 aa3.12□□□□□ -1.91
CDK5RAP2-209ENST00000473282 LYSTQ99698 3801 aa3.11□□□□□ -1.91
CDK5RAP2-209ENST00000473282 HECTD4Q9Y4D8 3996 aa3.11□□□□□ -1.91
CDK5RAP2-209ENST00000473282 KIAA1109Q2LD37 5005 aa3.09□□□□□ -1.91
CDK5RAP2-209ENST00000473282 RYR2Q92736 4967 aa3.09□□□□□ -1.91
CDK5RAP2-209ENST00000473282 RYR3Q15413 4870 aa3.08□□□□□ -1.92
CDK5RAP2-209ENST00000473282 RYR1P21817 5038 aa3.06□□□□□ -1.92
CDK5RAP2-209ENST00000473282 MT2AP02795 61 aa3.06□□□□□ -1.92
CDK5RAP2-209ENST00000473282 LCE2CQ5TA81 110 aa3.04□□□□□ -1.92
CDK5RAP2-209ENST00000473282 HERC2O95714 4834 aa3.03□□□□□ -1.92
CDK5RAP2-209ENST00000473282 MT1FP04733 61 aa3.02□□□□□ -1.93
CDK5RAP2-209ENST00000473282 FAT1Q14517 4588 aa3.02□□□□□ -1.93
CDK5RAP2-209ENST00000473282 SPRR2GQ9BYE4 73 aa3.02□□□□□ -1.93
CDK5RAP2-209ENST00000473282 PCLOQ9Y6V0 5065 aa3.01□□□□□ -1.93
CDK5RAP2-209ENST00000473282 LCE3CQ5T5A8 94 aa3□□□□□ -1.93
CDK5RAP2-209ENST00000473282 APOBP04114 4563 aaKnown RBP2.99□□□□□ -1.93
CDK5RAP2-209ENST00000473282 PKHD1L1Q86WI1 4243 aa2.98□□□□□ -1.93
CDK5RAP2-209ENST00000473282 KRTAP19-5Q3LI72 72 aa2.96□□□□□ -1.94
CDK5RAP2-209ENST00000473282 FAT3Q8TDW7 4589 aa2.93□□□□□ -1.94
CDK5RAP2-209ENST00000473282 SPRR2FQ96RM1 72 aa2.93□□□□□ -1.94
CDK5RAP2-209ENST00000473282 HSPG2P98160 4391 aa2.92□□□□□ -1.94
CDK5RAP2-209ENST00000473282 HYDINQ4G0P3 5121 aa2.9□□□□□ -1.95
CDK5RAP2-209ENST00000473282 PKD1P98161 4303 aa2.88□□□□□ -1.95
CDK5RAP2-209ENST00000473282 KMT2CQ8NEZ4 4911 aaKnown RBP2.88□□□□□ -1.95
CDK5RAP2-209ENST00000473282 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
CDK5RAP2-209ENST00000473282 ABCA13Q86UQ4 5058 aa2.88□□□□□ -1.95
CDK5RAP2-209ENST00000473282 TNXBP22105 4242 aa2.87□□□□□ -1.95
CDK5RAP2-209ENST00000473282 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
CDK5RAP2-209ENST00000473282 KRTAP9-6A0A140TA67 174 aa2.85□□□□□ -1.95
CDK5RAP2-209ENST00000473282 HERC1Q15751 4861 aa2.85□□□□□ -1.95
CDK5RAP2-209ENST00000473282 KRTAP9-2Q9BYQ4 174 aa2.85□□□□□ -1.95
CDK5RAP2-209ENST00000473282 LCE2BO14633 110 aa2.84□□□□□ -1.95
CDK5RAP2-209ENST00000473282 PRM1P04553 51 aa2.83□□□□□ -1.96
CDK5RAP2-209ENST00000473282 MUC17Q685J3 4493 aa2.83□□□□□ -1.96
CDK5RAP2-209ENST00000473282 LCE2DQ5TA82 110 aaPredicted RBP2.82□□□□□ -1.96
CDK5RAP2-209ENST00000473282 EPPK1P58107 5090 aaKnown RBP2.82□□□□□ -1.96
CDK5RAP2-209ENST00000473282 PKHD1P08F94 4074 aa2.82□□□□□ -1.96
CDK5RAP2-209ENST00000473282 SPRR2EP22531 72 aa2.81□□□□□ -1.96
CDK5RAP2-209ENST00000473282 SPRR2BP35325 72 aa2.81□□□□□ -1.96
CDK5RAP2-209ENST00000473282 SPRR2AP35326 72 aa2.81□□□□□ -1.96
CDK5RAP2-209ENST00000473282 KRTAP19-1Q8IUB9 90 aa2.81□□□□□ -1.96
CDK5RAP2-209ENST00000473282 LCE3BQ5TA77 95 aa2.8□□□□□ -1.96
CDK5RAP2-209ENST00000473282 LPAP08519 4548 aa2.79□□□□□ -1.96
CDK5RAP2-209ENST00000473282 KRTAP19-8Q3LI54 63 aa2.79□□□□□ -1.96
CDK5RAP2-209ENST00000473282 MYCBP2O75592 4640 aa2.78□□□□□ -1.96
CDK5RAP2-209ENST00000473282 LRP1Q07954 4544 aaKnown RBP2.77□□□□□ -1.97
CDK5RAP2-209ENST00000473282 MT1XP80297 61 aa2.77□□□□□ -1.97
CDK5RAP2-209ENST00000473282 SPRR2DP22532 72 aa2.75□□□□□ -1.97
CDK5RAP2-209ENST00000473282 KRTAP9-8Q9BYQ0 159 aa2.73□□□□□ -1.97
CDK5RAP2-209ENST00000473282 MT1BP07438 61 aa2.72□□□□□ -1.97
CDK5RAP2-209ENST00000473282 LCE2AQ5TA79 106 aaPredicted RBP2.71□□□□□ -1.97
CDK5RAP2-209ENST00000473282 MT1GP13640 62 aa2.7□□□□□ -1.98
CDK5RAP2-209ENST00000473282 KRTAP4-8A0A0G2JLE6 195 aa2.67□□□□□ -1.98
CDK5RAP2-209ENST00000473282 KRTAP4-8Q9BYQ9 185 aa2.67□□□□□ -1.98
CDK5RAP2-209ENST00000473282 KRTAP9-3Q9BYQ3 159 aa2.67□□□□□ -1.98
CDK5RAP2-209ENST00000473282 UBR4Q5T4S7 5183 aa2.65□□□□□ -1.98
CDK5RAP2-209ENST00000473282 RNF213Q63HN8 5207 aa2.63□□□□□ -1.99
CDK5RAP2-209ENST00000473282 LRP2P98164 4655 aa2.6□□□□□ -1.99
CDK5RAP2-209ENST00000473282 HMCN2Q8NDA2 5059 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms