RNA–Protein interactions for RNA: ENST00000473233.5

MCF2L2-208, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2L2, Length 4,748 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-208ENST00000473233 DNHD1Q96M86 4753 aa7.63□□□□□ -1.19
MCF2L2-208ENST00000473233 STARD9Q9P2P6 4700 aa7.61□□□□□ -1.19
MCF2L2-208ENST00000473233 DNAH17Q9UFH2 4485 aa7.6□□□□□ -1.19
MCF2L2-208ENST00000473233 ALMS1Q8TCU4 4167 aa7.52□□□□□ -1.21
MCF2L2-208ENST00000473233 LRP1BQ9NZR2 4599 aa7.47□□□□□ -1.21
MCF2L2-208ENST00000473233 KRTAP4-5Q9BYR2 181 aa7.47□□□□□ -1.21
MCF2L2-208ENST00000473233 DNAH8Q96JB1 4490 aa7.47□□□□□ -1.21
MCF2L2-208ENST00000473233 DNAH2Q9P225 4427 aa7.47□□□□□ -1.21
MCF2L2-208ENST00000473233 PRKDCP78527 4128 aaKnown RBP7.47□□□□□ -1.21
MCF2L2-208ENST00000473233 FAT1Q14517 4588 aa7.47□□□□□ -1.21
MCF2L2-208ENST00000473233 ANK2Q01484 3957 aa7.46□□□□□ -1.21
MCF2L2-208ENST00000473233 DYNC1H1Q14204 4646 aaKnown RBP7.41□□□□□ -1.22
MCF2L2-208ENST00000473233 KMT2AQ03164 3969 aa7.4□□□□□ -1.22
MCF2L2-208ENST00000473233 DNAH3Q8TD57 4116 aa7.4□□□□□ -1.23
MCF2L2-208ENST00000473233 PRO2289Q9P1D8 64 aa7.37□□□□□ -1.23
MCF2L2-208ENST00000473233 DYNC2H1Q8NCM8 4307 aaKnown RBP7.25□□□□□ -1.25
MCF2L2-208ENST00000473233 KRTAP15-1Q3LI76 137 aa7.25□□□□□ -1.25
MCF2L2-208ENST00000473233 LYSTQ99698 3801 aa7.25□□□□□ -1.25
MCF2L2-208ENST00000473233 CMYA5Q8N3K9 4069 aa7.24□□□□□ -1.25
MCF2L2-208ENST00000473233 SACSQ9NZJ4 4579 aa7.21□□□□□ -1.25
MCF2L2-208ENST00000473233 VPS13BQ7Z7G8 4022 aa7.21□□□□□ -1.26
MCF2L2-208ENST00000473233 LORP23490 312 aaPredicted RBP7.2□□□□□ -1.26
MCF2L2-208ENST00000473233 FRAS1Q86XX4 4008 aa7.16□□□□□ -1.26
MCF2L2-208ENST00000473233 FAT2Q9NYQ8 4349 aa7.14□□□□□ -1.27
MCF2L2-208ENST00000473233 RYR1P21817 5038 aa7.13□□□□□ -1.27
MCF2L2-208ENST00000473233 MYCBP2O75592 4640 aa7.11□□□□□ -1.27
MCF2L2-208ENST00000473233 DNAH7Q8WXX0 4024 aa7.11□□□□□ -1.27
MCF2L2-208ENST00000473233 DNAH6Q9C0G6 4158 aa7.1□□□□□ -1.27
MCF2L2-208ENST00000473233 HECTD4Q9Y4D8 3996 aa7.09□□□□□ -1.27
MCF2L2-208ENST00000473233 APOBP04114 4563 aaKnown RBP7.03□□□□□ -1.28
MCF2L2-208ENST00000473233 KRTAP4-1Q9BYQ7 146 aa7.02□□□□□ -1.29
MCF2L2-208ENST00000473233 KIAA1109Q2LD37 5005 aa7.01□□□□□ -1.29
MCF2L2-208ENST00000473233 LRP1Q07954 4544 aaKnown RBP6.95□□□□□ -1.3
MCF2L2-208ENST00000473233 RYR3Q15413 4870 aa6.89□□□□□ -1.31
MCF2L2-208ENST00000473233 HYDINQ4G0P3 5121 aa6.87□□□□□ -1.31
MCF2L2-208ENST00000473233 KRTAP23-1A1A580 65 aa6.86□□□□□ -1.31
MCF2L2-208ENST00000473233 KRTAP10-12P60413 245 aa6.85□□□□□ -1.31
MCF2L2-208ENST00000473233 FAT3Q8TDW7 4589 aa6.84□□□□□ -1.31
MCF2L2-208ENST00000473233 KRTAP17-1Q9BYP8 105 aa6.84□□□□□ -1.32
MCF2L2-208ENST00000473233 LCE3AQ5TA76 89 aa6.79□□□□□ -1.32
MCF2L2-208ENST00000473233 PKHD1P08F94 4074 aa6.78□□□□□ -1.32
MCF2L2-208ENST00000473233 KRTAP12-3P60328 96 aa6.74□□□□□ -1.33
MCF2L2-208ENST00000473233 RYR2Q92736 4967 aa6.71□□□□□ -1.34
MCF2L2-208ENST00000473233 LRP2P98164 4655 aa6.64□□□□□ -1.35
MCF2L2-208ENST00000473233 MT1HP80294 61 aa6.62□□□□□ -1.35
MCF2L2-208ENST00000473233 SPRR2GQ9BYE4 73 aa6.6□□□□□ -1.35
MCF2L2-208ENST00000473233 PKD1P98161 4303 aa6.59□□□□□ -1.35
MCF2L2-208ENST00000473233 MT2AP02795 61 aa6.57□□□□□ -1.36
MCF2L2-208ENST00000473233 HSPG2P98160 4391 aa6.53□□□□□ -1.36
MCF2L2-208ENST00000473233 INE1O15225 51 aa6.52□□□□□ -1.37
MCF2L2-208ENST00000473233 HERC2O95714 4834 aa6.49□□□□□ -1.37
MCF2L2-208ENST00000473233 MT1FP04733 61 aa6.48□□□□□ -1.37
MCF2L2-208ENST00000473233 KMT2CQ8NEZ4 4911 aaKnown RBP6.46□□□□□ -1.37
MCF2L2-208ENST00000473233 KRTAP19-1Q8IUB9 90 aa6.35□□□□□ -1.39
MCF2L2-208ENST00000473233 LPAP08519 4548 aa6.34□□□□□ -1.4
MCF2L2-208ENST00000473233 CRCT1Q9UGL9 99 aa6.31□□□□□ -1.4
MCF2L2-208ENST00000473233 PKHD1L1Q86WI1 4243 aa6.29□□□□□ -1.4
MCF2L2-208ENST00000473233 KRTAP8-1Q8IUC2 63 aa6.27□□□□□ -1.41
MCF2L2-208ENST00000473233 TNXBP22105 4242 aa6.27□□□□□ -1.41
MCF2L2-208ENST00000473233 KRTAP19-8Q3LI54 63 aa6.19□□□□□ -1.42
MCF2L2-208ENST00000473233 LCE2CQ5TA81 110 aa6.16□□□□□ -1.42
MCF2L2-208ENST00000473233 BIRC6Q9NR09 4857 aa6.14□□□□□ -1.43
MCF2L2-208ENST00000473233 KRTAP19-5Q3LI72 72 aa6.13□□□□□ -1.43
MCF2L2-208ENST00000473233 KRTAP19-2Q3LHN2 52 aa6.11□□□□□ -1.43
MCF2L2-208ENST00000473233 HERC1Q15751 4861 aa6.11□□□□□ -1.43
MCF2L2-208ENST00000473233 KRTAP9-8Q9BYQ0 159 aa6.1□□□□□ -1.43
MCF2L2-208ENST00000473233 EPPK1P58107 5090 aaKnown RBP6.1□□□□□ -1.43
MCF2L2-208ENST00000473233 KRTAP10-7P60409 375 aaPredicted RBP6.09□□□□□ -1.43
MCF2L2-208ENST00000473233 PCLOQ9Y6V0 5065 aa6.07□□□□□ -1.44
MCF2L2-208ENST00000473233 MT1XP80297 61 aa6.07□□□□□ -1.44
MCF2L2-208ENST00000473233 MT1BP07438 61 aa6.06□□□□□ -1.44
MCF2L2-208ENST00000473233 ABCA13Q86UQ4 5058 aa6.04□□□□□ -1.44
MCF2L2-208ENST00000473233 MUC17Q685J3 4493 aa6.04□□□□□ -1.44
MCF2L2-208ENST00000473233 KRTAP10-5P60370 271 aa6.03□□□□□ -1.44
MCF2L2-208ENST00000473233 LCE3CQ5T5A8 94 aa6.02□□□□□ -1.45
MCF2L2-208ENST00000473233 FLGP20930 4061 aaPredicted RBP5.96□□□□□ -1.46
MCF2L2-208ENST00000473233 SPRR5A0A1B0GTR4 108 aa5.95□□□□□ -1.46
MCF2L2-208ENST00000473233 KRTAP9-3Q9BYQ3 159 aa5.9□□□□□ -1.47
MCF2L2-208ENST00000473233 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
MCF2L2-208ENST00000473233 KRTAP4-8A0A0G2JLE6 195 aa5.78□□□□□ -1.48
MCF2L2-208ENST00000473233 KRTAP4-8Q9BYQ9 185 aa5.78□□□□□ -1.48
MCF2L2-208ENST00000473233 SPRR2FQ96RM1 72 aa5.73□□□□□ -1.49
MCF2L2-208ENST00000473233 MUC2Q02817 5179 aa5.72□□□□□ -1.49
MCF2L2-208ENST00000473233 FAT4Q6V0I7 4981 aa5.68□□□□□ -1.5
MCF2L2-208ENST00000473233 RNF213Q63HN8 5207 aa5.67□□□□□ -1.5
MCF2L2-208ENST00000473233 UBR4Q5T4S7 5183 aa5.66□□□□□ -1.5
MCF2L2-208ENST00000473233 LCE2BO14633 110 aa5.66□□□□□ -1.5
MCF2L2-208ENST00000473233 HMCN2Q8NDA2 5059 aa5.63□□□□□ -1.51
MCF2L2-208ENST00000473233 MT1GP13640 62 aa5.49□□□□□ -1.53
MCF2L2-208ENST00000473233 KRTAP4-7Q9BYR0 210 aa5.48□□□□□ -1.53
MCF2L2-208ENST00000473233 FSIP2Q5CZC0 6907 aa5.45□□□□□ -1.54
MCF2L2-208ENST00000473233 MT1LQ93083 61 aa5.41□□□□□ -1.54
MCF2L2-208ENST00000473233 MT1EP04732 61 aa5.38□□□□□ -1.55
MCF2L2-208ENST00000473233 LCE3BQ5TA77 95 aa5.36□□□□□ -1.55
MCF2L2-208ENST00000473233 KRTAP12-4P60329 112 aa5.33□□□□□ -1.56
MCF2L2-208ENST00000473233 LCE2AQ5TA79 106 aaPredicted RBP5.29□□□□□ -1.56
MCF2L2-208ENST00000473233 KRTAP19-3Q7Z4W3 81 aa5.29□□□□□ -1.56
MCF2L2-208ENST00000473233 SPRR2EP22531 72 aa5.25□□□□□ -1.57
MCF2L2-208ENST00000473233 SPRR2BP35325 72 aa5.25□□□□□ -1.57
MCF2L2-208ENST00000473233 SPRR2AP35326 72 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 223.8 ms