RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 FAM236AA0A1B0GUQ0 79 aa6.93□□□□□ -1.3
VTI1A-203ENST00000472892 FAM236BA0A1B0GV22 79 aa6.93□□□□□ -1.3
VTI1A-203ENST00000472892 TP53AIP1Q9HCN2 124 aa6.93□□□□□ -1.3
VTI1A-203ENST00000472892 LCA10Q71F78 164 aa6.92□□□□□ -1.3
VTI1A-203ENST00000472892 MT1BP07438 61 aa6.9□□□□□ -1.3
VTI1A-203ENST00000472892 SPRR2GQ9BYE4 73 aa6.9□□□□□ -1.3
VTI1A-203ENST00000472892 KRTAP19-8Q3LI54 63 aa6.87□□□□□ -1.31
VTI1A-203ENST00000472892 Q5VV11 94 aa6.86□□□□□ -1.31
VTI1A-203ENST00000472892 A6NN06 94 aa6.85□□□□□ -1.31
VTI1A-203ENST00000472892 F8W1H4 67 aa6.83□□□□□ -1.32
VTI1A-203ENST00000472892 KRTAP15-1Q3LI76 137 aa6.83□□□□□ -1.32
VTI1A-203ENST00000472892 GTF2H5Q6ZYL4 71 aa6.83□□□□□ -1.32
VTI1A-203ENST00000472892 CYP4F30PQ9H0H9 118 aa6.82□□□□□ -1.32
VTI1A-203ENST00000472892 KLKP1Q107X0 134 aa6.81□□□□□ -1.32
VTI1A-203ENST00000472892 ETDBQ3ZM63 59 aa6.8□□□□□ -1.32
VTI1A-203ENST00000472892 KRTAP10-5P60370 271 aa6.77□□□□□ -1.33
VTI1A-203ENST00000472892 NEBP20929 6669 aa6.75□□□□□ -1.33
VTI1A-203ENST00000472892 A0A087WVE0 104 aa6.74□□□□□ -1.33
VTI1A-203ENST00000472892 TRAV22A0A0B4J277 110 aa6.73□□□□□ -1.33
VTI1A-203ENST00000472892 LOC101927531A0A1B0GV80 90 aa6.73□□□□□ -1.33
VTI1A-203ENST00000472892 CRIPTQ9P021 101 aa6.73□□□□□ -1.33
VTI1A-203ENST00000472892 MUC12Q9UKN1 5478 aa6.72□□□□□ -1.33
VTI1A-203ENST00000472892 ACYP1P07311 99 aa6.68□□□□□ -1.34
VTI1A-203ENST00000472892 IMUPQ9GZP8 106 aa6.67□□□□□ -1.34
VTI1A-203ENST00000472892 UQCRQO14949 82 aa6.65□□□□□ -1.34
VTI1A-203ENST00000472892 ATP5EP2Q5VTU8 51 aa6.64□□□□□ -1.35
VTI1A-203ENST00000472892 FAM240AA0A1B0GVK7 77 aa6.63□□□□□ -1.35
VTI1A-203ENST00000472892 PCP4L1A6NKN8 68 aa6.63□□□□□ -1.35
VTI1A-203ENST00000472892 H0YAA0 97 aa6.63□□□□□ -1.35
VTI1A-203ENST00000472892 NDUFC1O43677 76 aa6.63□□□□□ -1.35
VTI1A-203ENST00000472892 ATOX1O00244 68 aa6.62□□□□□ -1.35
VTI1A-203ENST00000472892 KRTAP5-9P26371 169 aa6.62□□□□□ -1.35
VTI1A-203ENST00000472892 H0Y9P7 68 aa6.61□□□□□ -1.35
VTI1A-203ENST00000472892 HIST1H4AP62805 103 aaKnown RBP6.61□□□□□ -1.35
VTI1A-203ENST00000472892 A8MUN3 132 aa6.56□□□□□ -1.36
VTI1A-203ENST00000472892 KMT2DO14686 5537 aa6.56□□□□□ -1.36
VTI1A-203ENST00000472892 ADM2Q7Z4H4 148 aa6.53□□□□□ -1.36
VTI1A-203ENST00000472892 KRTAP20-1Q3LI63 56 aa6.51□□□□□ -1.37
VTI1A-203ENST00000472892 LINC00643Q86TS7 51 aa6.51□□□□□ -1.37
VTI1A-203ENST00000472892 MDN1Q9NU22 5596 aa6.51□□□□□ -1.37
VTI1A-203ENST00000472892 LINC00208Q96KT6 92 aa6.5□□□□□ -1.37
VTI1A-203ENST00000472892 OCR1Q9BZK8 76 aa6.46□□□□□ -1.38
VTI1A-203ENST00000472892 MP68P56378 58 aa6.44□□□□□ -1.38
VTI1A-203ENST00000472892 PRO2289Q9P1D8 64 aa6.44□□□□□ -1.38
VTI1A-203ENST00000472892 MT1XP80297 61 aa6.43□□□□□ -1.38
VTI1A-203ENST00000472892 PLAC4Q8WY50 150 aa6.41□□□□□ -1.38
VTI1A-203ENST00000472892 P0C880 135 aa6.37□□□□□ -1.39
VTI1A-203ENST00000472892 R4GN34 69 aa6.37□□□□□ -1.39
VTI1A-203ENST00000472892 SPRR2FQ96RM1 72 aa6.36□□□□□ -1.39
VTI1A-203ENST00000472892 H3BPC8 53 aa6.35□□□□□ -1.39
VTI1A-203ENST00000472892 C20orf197Q8N268 126 aa6.34□□□□□ -1.39
VTI1A-203ENST00000472892 KRTAP2-3P0C7H8 128 aa6.33□□□□□ -1.4
VTI1A-203ENST00000472892 DMAC1Q96GE9 116 aa6.33□□□□□ -1.4
VTI1A-203ENST00000472892 KRTAP2-4Q9BYR9 128 aa6.33□□□□□ -1.4
VTI1A-203ENST00000472892 M0QZ58 72 aa6.31□□□□□ -1.4
VTI1A-203ENST00000472892 KRTAP12-2P59991 146 aa6.31□□□□□ -1.4
VTI1A-203ENST00000472892 KRTAP8-1Q8IUC2 63 aa6.3□□□□□ -1.4
VTI1A-203ENST00000472892 SPRR2EP22531 72 aa6.29□□□□□ -1.4
VTI1A-203ENST00000472892 SPRR2BP35325 72 aa6.29□□□□□ -1.4
VTI1A-203ENST00000472892 SPRR2AP35326 72 aa6.29□□□□□ -1.4
VTI1A-203ENST00000472892 A0A1B0GV90 55 aa6.27□□□□□ -1.41
VTI1A-203ENST00000472892 SCGB1A1P11684 91 aa6.24□□□□□ -1.41
VTI1A-203ENST00000472892 LCE1AQ5T7P2 110 aa6.22□□□□□ -1.41
VTI1A-203ENST00000472892 J3QR89 54 aa6.21□□□□□ -1.42
VTI1A-203ENST00000472892 LINC01554Q52M75 96 aa6.21□□□□□ -1.42
VTI1A-203ENST00000472892 TRAV7A0A075B6U4 112 aa6.2□□□□□ -1.42
VTI1A-203ENST00000472892 ACYP2P14621 99 aa6.15□□□□□ -1.42
VTI1A-203ENST00000472892 KRTAP10-7P60409 375 aaPredicted RBP6.13□□□□□ -1.43
VTI1A-203ENST00000472892 KRTAP10-12P60413 245 aa6.12□□□□□ -1.43
VTI1A-203ENST00000472892 KRTAP2-2Q9BYT5 123 aa6.12□□□□□ -1.43
VTI1A-203ENST00000472892 KRTAP2-1Q9BYU5 128 aa6.12□□□□□ -1.43
VTI1A-203ENST00000472892 SPTSSBQ8NFR3 76 aa6.09□□□□□ -1.43
VTI1A-203ENST00000472892 SVIPQ8NHG7 77 aa6.09□□□□□ -1.43
VTI1A-203ENST00000472892 SPRR2DP22532 72 aa6.08□□□□□ -1.44
VTI1A-203ENST00000472892 MT-ATP8P03928 68 aa6.06□□□□□ -1.44
VTI1A-203ENST00000472892 SMIM20Q8N5G0 67 aa6.05□□□□□ -1.44
VTI1A-203ENST00000472892 CHKB-CPT1BH3BT56 60 aa6□□□□□ -1.45
VTI1A-203ENST00000472892 SNURFQ9Y675 71 aa5.93□□□□□ -1.46
VTI1A-203ENST00000472892 PCP4P48539 62 aa5.91□□□□□ -1.46
VTI1A-203ENST00000472892 K7ERU9 68 aa5.9□□□□□ -1.46
VTI1A-203ENST00000472892 SPANXA2-OT1Q8N9U9 137 aa5.9□□□□□ -1.46
VTI1A-203ENST00000472892 KRTAP13-4Q3LI77 160 aa5.89□□□□□ -1.47
VTI1A-203ENST00000472892 CAMK2N1Q7Z7J9 78 aa5.82□□□□□ -1.48
VTI1A-203ENST00000472892 SERP2Q8N6R1 65 aa5.79□□□□□ -1.48
VTI1A-203ENST00000472892 KRTAP19-7Q3SYF9 63 aa5.76□□□□□ -1.49
VTI1A-203ENST00000472892 COA5Q86WW8 74 aa5.72□□□□□ -1.49
VTI1A-203ENST00000472892 MT1EP04732 61 aa5.71□□□□□ -1.5
VTI1A-203ENST00000472892 DSTQ03001 7570 aaKnown RBP5.69□□□□□ -1.5
VTI1A-203ENST00000472892 SEC61GP60059 68 aa5.68□□□□□ -1.5
VTI1A-203ENST00000472892 KRTAP19-3Q7Z4W3 81 aa5.68□□□□□ -1.5
VTI1A-203ENST00000472892 SERP1Q9Y6X1 66 aa5.68□□□□□ -1.5
VTI1A-203ENST00000472892 A0A0A0MQY5 61 aa5.67□□□□□ -1.5
VTI1A-203ENST00000472892 A0A0D9SG42 100 aa5.67□□□□□ -1.5
VTI1A-203ENST00000472892 SPATA8Q6RVD6 105 aa5.65□□□□□ -1.5
VTI1A-203ENST00000472892 A0A1B0GU33 70 aa5.62□□□□□ -1.51
VTI1A-203ENST00000472892 SPINT4Q6UDR6 99 aa5.61□□□□□ -1.51
VTI1A-203ENST00000472892 KRTAP12-1P59990 96 aa5.58□□□□□ -1.52
VTI1A-203ENST00000472892 GPR98Q8WXG9 6306 aa5.57□□□□□ -1.52
VTI1A-203ENST00000472892 MT1GP13640 62 aa5.56□□□□□ -1.52
VTI1A-203ENST00000472892 COX7CP15954 63 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms