RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 STAB1Q9NY15 2570 aa1.3□□□□□ -2.2
SCN3A-207ENST00000471697 CD52P31358 61 aa1.3□□□□□ -2.2
SCN3A-207ENST00000471697 KRTAP12-4P60329 112 aa1.3□□□□□ -2.2
SCN3A-207ENST00000471697 HIVEP3Q5T1R4 2406 aa1.3□□□□□ -2.2
SCN3A-207ENST00000471697 CUBNO60494 3623 aa1.29□□□□□ -2.2
SCN3A-207ENST00000471697 F8P00451 2351 aa1.29□□□□□ -2.2
SCN3A-207ENST00000471697 ITPR2Q14571 2701 aa1.29□□□□□ -2.2
SCN3A-207ENST00000471697 VWFP04275 2813 aa1.29□□□□□ -2.2
SCN3A-207ENST00000471697 A0A0D9SG42 100 aa1.29□□□□□ -2.2
SCN3A-207ENST00000471697 H3BNG1 76 aa1.29□□□□□ -2.2
SCN3A-207ENST00000471697 NBASA2RRP1 2371 aa1.28□□□□□ -2.2
SCN3A-207ENST00000471697 MUC2Q02817 5179 aa1.28□□□□□ -2.2
SCN3A-207ENST00000471697 BSNQ9UPA5 3926 aa1.28□□□□□ -2.2
SCN3A-207ENST00000471697 AKAP13Q12802 2813 aa1.28□□□□□ -2.2
SCN3A-207ENST00000471697 CELSR2Q9HCU4 2923 aa1.28□□□□□ -2.2
SCN3A-207ENST00000471697 CRYBG3Q68DQ2 2970 aa1.28□□□□□ -2.2
SCN3A-207ENST00000471697 CSMD2Q7Z408 3487 aa1.27□□□□□ -2.21
SCN3A-207ENST00000471697 CEP295Q9C0D2 2601 aa1.27□□□□□ -2.21
SCN3A-207ENST00000471697 MTORP42345 2549 aa1.26□□□□□ -2.21
SCN3A-207ENST00000471697 DEFB124Q8NES8 71 aa1.26□□□□□ -2.21
SCN3A-207ENST00000471697 VPS13CQ709C8 3753 aa1.26□□□□□ -2.21
SCN3A-207ENST00000471697 ANKHD1Q8IWZ3 2542 aaKnown RBP1.26□□□□□ -2.21
SCN3A-207ENST00000471697 LRBAP50851 2863 aa1.26□□□□□ -2.21
SCN3A-207ENST00000471697 HIVEP1P15822 2718 aa1.25□□□□□ -2.21
SCN3A-207ENST00000471697 ADGRG4Q8IZF6 3080 aa1.25□□□□□ -2.21
SCN3A-207ENST00000471697 DEFB136Q30KP8 78 aa1.25□□□□□ -2.21
SCN3A-207ENST00000471697 ZNF469Q96JG9 3925 aaPredicted RBP1.25□□□□□ -2.21
SCN3A-207ENST00000471697 TGP01266 2768 aa1.25□□□□□ -2.21
SCN3A-207ENST00000471697 ABCA13Q86UQ4 5058 aa1.24□□□□□ -2.21
SCN3A-207ENST00000471697 J3QKU1 62 aa1.24□□□□□ -2.21
SCN3A-207ENST00000471697 USP9YO00507 2555 aaPredicted RBP1.24□□□□□ -2.21
SCN3A-207ENST00000471697 MEGF8Q7Z7M0 2845 aa1.24□□□□□ -2.21
SCN3A-207ENST00000471697 UTP20O75691 2785 aaKnown RBP1.24□□□□□ -2.21
SCN3A-207ENST00000471697 DMBT1Q9UGM3 2413 aaPredicted RBP1.23□□□□□ -2.21
SCN3A-207ENST00000471697 LINC01556Q5JQF7 62 aa1.23□□□□□ -2.21
SCN3A-207ENST00000471697 HERC1Q15751 4861 aa1.23□□□□□ -2.21
SCN3A-207ENST00000471697 A0A096LNI7 61 aa1.22□□□□□ -2.21
SCN3A-207ENST00000471697 CRCT1Q9UGL9 99 aa1.22□□□□□ -2.21
SCN3A-207ENST00000471697 NIPBLQ6KC79 2804 aaeCLIP1.22□□□□□ -2.21
SCN3A-207ENST00000471697 TLN2Q9Y4G6 2542 aa1.22□□□□□ -2.21
SCN3A-207ENST00000471697 TENM1Q9UKZ4 2725 aa1.21□□□□□ -2.22
SCN3A-207ENST00000471697 SPINK6Q6UWN8 80 aa1.21□□□□□ -2.22
SCN3A-207ENST00000471697 ZANQ9Y493 2812 aa1.21□□□□□ -2.22
SCN3A-207ENST00000471697 ATMQ13315 3056 aa1.21□□□□□ -2.22
SCN3A-207ENST00000471697 PRKDCP78527 4128 aaKnown RBP1.21□□□□□ -2.22
SCN3A-207ENST00000471697 DEFB133Q30KQ1 61 aa1.2□□□□□ -2.22
SCN3A-207ENST00000471697 KRTAP4-1Q9BYQ7 146 aa1.2□□□□□ -2.22
SCN3A-207ENST00000471697 APCP25054 2843 aa1.2□□□□□ -2.22
SCN3A-207ENST00000471697 MAP1AP78559 2803 aaPredicted RBP1.19□□□□□ -2.22
SCN3A-207ENST00000471697 SVEP1Q4LDE5 3571 aa1.19□□□□□ -2.22
SCN3A-207ENST00000471697 A0A096LPF7 62 aa1.19□□□□□ -2.22
SCN3A-207ENST00000471697 TNP1P09430 55 aa1.19□□□□□ -2.22
SCN3A-207ENST00000471697 SPART-AS1P0CW21 52 aa1.19□□□□□ -2.22
SCN3A-207ENST00000471697 ANK2Q01484 3957 aa1.19□□□□□ -2.22
SCN3A-207ENST00000471697 LAMA1P25391 3075 aa1.19□□□□□ -2.22
SCN3A-207ENST00000471697 ACANP16112 2415 aa1.18□□□□□ -2.22
SCN3A-207ENST00000471697 SONP18583 2426 aaKnown RBP1.18□□□□□ -2.22
SCN3A-207ENST00000471697 C9orf92A6NGG3 77 aa1.17□□□□□ -2.22
SCN3A-207ENST00000471697 SACSQ9NZJ4 4579 aa1.17□□□□□ -2.22
SCN3A-207ENST00000471697 GPR98Q8WXG9 6306 aa1.17□□□□□ -2.22
SCN3A-207ENST00000471697 RPS29P62273 56 aaKnown RBP1.16□□□□□ -2.22
SCN3A-207ENST00000471697 CENPEQ02224 2701 aa1.16□□□□□ -2.22
SCN3A-207ENST00000471697 DCHS2Q6V1P9 2916 aa1.16□□□□□ -2.22
SCN3A-207ENST00000471697 TRRAPQ9Y4A5 3859 aa1.15□□□□□ -2.23
SCN3A-207ENST00000471697 MGAM2Q2M2H8 2515 aa1.15□□□□□ -2.23
SCN3A-207ENST00000471697 FAT4Q6V0I7 4981 aa1.15□□□□□ -2.23
SCN3A-207ENST00000471697 DYNC2H1Q8NCM8 4307 aaKnown RBP1.15□□□□□ -2.23
SCN3A-207ENST00000471697 DNAH1Q9P2D7 4330 aa1.15□□□□□ -2.23
SCN3A-207ENST00000471697 RNF213Q63HN8 5207 aa1.15□□□□□ -2.23
SCN3A-207ENST00000471697 KRTAP10-4P60372 401 aaPredicted RBP1.14□□□□□ -2.23
SCN3A-207ENST00000471697 VPS13DQ5THJ4 4388 aa1.14□□□□□ -2.23
SCN3A-207ENST00000471697 NSD1Q96L73 2696 aaPredicted RBP1.13□□□□□ -2.23
SCN3A-207ENST00000471697 MXRA5Q9NR99 2828 aa1.13□□□□□ -2.23
SCN3A-207ENST00000471697 DEFB135Q30KP9 77 aa1.13□□□□□ -2.23
SCN3A-207ENST00000471697 HECTD4Q9Y4D8 3996 aa1.13□□□□□ -2.23
SCN3A-207ENST00000471697 TENM3Q9P273 2699 aa1.12□□□□□ -2.23
SCN3A-207ENST00000471697 KRTAP12-3P60328 96 aa1.12□□□□□ -2.23
SCN3A-207ENST00000471697 CMYA5Q8N3K9 4069 aa1.11□□□□□ -2.23
SCN3A-207ENST00000471697 ANK3Q12955 4377 aaKnown RBP1.11□□□□□ -2.23
SCN3A-207ENST00000471697 TACC2O95359 2948 aa1.1□□□□□ -2.23
SCN3A-207ENST00000471697 U3KQA8 63 aa1.09□□□□□ -2.23
SCN3A-207ENST00000471697 FRAS1Q86XX4 4008 aa1.09□□□□□ -2.24
SCN3A-207ENST00000471697 LYSTQ99698 3801 aa1.08□□□□□ -2.24
SCN3A-207ENST00000471697 M0R2T5 61 aa1.08□□□□□ -2.24
SCN3A-207ENST00000471697 CSMD3Q7Z407 3707 aa1.08□□□□□ -2.24
SCN3A-207ENST00000471697 FSIP2Q5CZC0 6907 aa1.08□□□□□ -2.24
SCN3A-207ENST00000471697 HTN3P15516 51 aa1.07□□□□□ -2.24
SCN3A-207ENST00000471697 KMT2AQ03164 3969 aa1.07□□□□□ -2.24
SCN3A-207ENST00000471697 HMCN2Q8NDA2 5059 aa1.06□□□□□ -2.24
SCN3A-207ENST00000471697 DNAH11Q96DT5 4516 aa1.06□□□□□ -2.24
SCN3A-207ENST00000471697 COL7A1Q02388 2944 aa1.05□□□□□ -2.24
SCN3A-207ENST00000471697 KRTAP2-3P0C7H8 128 aa1.04□□□□□ -2.24
SCN3A-207ENST00000471697 KRTAP2-4Q9BYR9 128 aa1.04□□□□□ -2.24
SCN3A-207ENST00000471697 KRTAP2-1Q9BYU5 128 aa1.04□□□□□ -2.24
SCN3A-207ENST00000471697 HRNRQ86YZ3 2850 aaPredicted RBP1.03□□□□□ -2.24
SCN3A-207ENST00000471697 DNAH3Q8TD57 4116 aa1.03□□□□□ -2.24
SCN3A-207ENST00000471697 FCGBPQ9Y6R7 5405 aaPredicted RBP1.03□□□□□ -2.24
SCN3A-207ENST00000471697 SSPOA2VEC9 5147 aa1.02□□□□□ -2.25
SCN3A-207ENST00000471697 PKHD1P08F94 4074 aa1.01□□□□□ -2.25
SCN3A-207ENST00000471697 MYCBP2O75592 4640 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms