RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 C6orf48Q9UBA6 75 aa2.46□□□□□ -2.02
NF1-208ENST00000471572 CDKN2A-AS1Q9UH64 79 aa2.46□□□□□ -2.02
NF1-208ENST00000471572 NDUFC1O43677 76 aa2.46□□□□□ -2.02
NF1-208ENST00000471572 BAGE3Q86Y29 109 aa2.45□□□□□ -2.02
NF1-208ENST00000471572 SRRM2Q9UQ35 2752 aaKnown RBP2.45□□□□□ -2.02
NF1-208ENST00000471572 COX17Q14061 63 aa2.44□□□□□ -2.02
NF1-208ENST00000471572 SPINK6Q6UWN8 80 aa2.44□□□□□ -2.02
NF1-208ENST00000471572 KRTAP13-1Q8IUC0 172 aa2.44□□□□□ -2.02
NF1-208ENST00000471572 UQCR10Q9UDW1 63 aa2.44□□□□□ -2.02
NF1-208ENST00000471572 HAMPP81172 84 aa2.44□□□□□ -2.02
NF1-208ENST00000471572 PLNP26678 52 aa2.43□□□□□ -2.02
NF1-208ENST00000471572 TOMM7Q9P0U1 55 aa2.43□□□□□ -2.02
NF1-208ENST00000471572 HIGD1BQ9P298 99 aa2.43□□□□□ -2.02
NF1-208ENST00000471572 DMBT1Q9UGM3 2413 aaPredicted RBP2.43□□□□□ -2.02
NF1-208ENST00000471572 NCR3O14931 201 aa2.42□□□□□ -2.02
NF1-208ENST00000471572 LEPROTL1O95214 131 aa2.42□□□□□ -2.02
NF1-208ENST00000471572 PMCHL1Q16048 86 aa2.42□□□□□ -2.02
NF1-208ENST00000471572 TMEM170BQ5T4T1 132 aa2.42□□□□□ -2.02
NF1-208ENST00000471572 LINC01600Q96MT4 127 aa2.41□□□□□ -2.02
NF1-208ENST00000471572 FAT3Q8TDW7 4589 aa2.41□□□□□ -2.02
NF1-208ENST00000471572 MYMXA0A1B0GTQ4 84 aa2.41□□□□□ -2.02
NF1-208ENST00000471572 MYCBP2O75592 4640 aa2.4□□□□□ -2.02
NF1-208ENST00000471572 BCE1O60756 84 aa2.39□□□□□ -2.03
NF1-208ENST00000471572 COX6CP09669 75 aa2.39□□□□□ -2.03
NF1-208ENST00000471572 MT1HL1P0DM35 61 aa2.39□□□□□ -2.03
NF1-208ENST00000471572 LINC00158P58513 81 aa2.39□□□□□ -2.03
NF1-208ENST00000471572 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
NF1-208ENST00000471572 HERC1Q15751 4861 aa2.38□□□□□ -2.03
NF1-208ENST00000471572 TNXBP22105 4242 aa2.37□□□□□ -2.03
NF1-208ENST00000471572 C3orf79P0CE67 100 aa2.37□□□□□ -2.03
NF1-208ENST00000471572 SMIM13P0DJ93 91 aa2.37□□□□□ -2.03
NF1-208ENST00000471572 SPRR1AP35321 89 aa2.37□□□□□ -2.03
NF1-208ENST00000471572 KCNQ1DNQ9H478 68 aa2.37□□□□□ -2.03
NF1-208ENST00000471572 LINC01558Q9Y6Z2 57 aa2.37□□□□□ -2.03
NF1-208ENST00000471572 KRTAP12-3P60328 96 aa2.36□□□□□ -2.03
NF1-208ENST00000471572 HMCN2Q8NDA2 5059 aa2.36□□□□□ -2.03
NF1-208ENST00000471572 LINC00575Q6W349 94 aa2.35□□□□□ -2.03
NF1-208ENST00000471572 PLAC4Q8WY50 150 aa2.35□□□□□ -2.03
NF1-208ENST00000471572 LRP1Q07954 4544 aaKnown RBP2.35□□□□□ -2.03
NF1-208ENST00000471572 ZNF815PA8K554 130 aa2.34□□□□□ -2.04
NF1-208ENST00000471572 KRTAP12-4P60329 112 aa2.34□□□□□ -2.04
NF1-208ENST00000471572 ETDBQ3ZM63 59 aa2.34□□□□□ -2.04
NF1-208ENST00000471572 ACYP2P14621 99 aa2.33□□□□□ -2.04
NF1-208ENST00000471572 LINC00308Q8TCZ7 52 aa2.33□□□□□ -2.04
NF1-208ENST00000471572 ETDCA0A1B0GVM5 59 aa2.32□□□□□ -2.04
NF1-208ENST00000471572 SPRR4Q96PI1 79 aa2.32□□□□□ -2.04
NF1-208ENST00000471572 Q6ZRX8 168 aa2.31□□□□□ -2.04
NF1-208ENST00000471572 PRLHP81277 87 aa2.3□□□□□ -2.04
NF1-208ENST00000471572 SSBP3-AS1Q7Z2R9 100 aa2.3□□□□□ -2.04
NF1-208ENST00000471572 HMCN1Q96RW7 5635 aa2.3□□□□□ -2.04
NF1-208ENST00000471572 SPRR1BP22528 89 aa2.3□□□□□ -2.04
NF1-208ENST00000471572 RPS29P62273 56 aaKnown RBP2.3□□□□□ -2.04
NF1-208ENST00000471572 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.3□□□□□ -2.04
NF1-208ENST00000471572 UQCR11O14957 56 aa2.29□□□□□ -2.04
NF1-208ENST00000471572 COX8AP10176 69 aa2.29□□□□□ -2.04
NF1-208ENST00000471572 MUSTN1Q8IVN3 82 aa2.29□□□□□ -2.04
NF1-208ENST00000471572 LINC00472Q9H8W2 130 aa2.29□□□□□ -2.04
NF1-208ENST00000471572 SPCS1Q9Y6A9 102 aa2.29□□□□□ -2.04
NF1-208ENST00000471572 COX7BP24311 80 aa2.29□□□□□ -2.04
NF1-208ENST00000471572 SPINK1P00995 79 aa2.27□□□□□ -2.05
NF1-208ENST00000471572 IGLV5-48A0A075B6I7 105 aa2.27□□□□□ -2.05
NF1-208ENST00000471572 F8WEM9 126 aa2.26□□□□□ -2.05
NF1-208ENST00000471572 PRR15LQ9BU68 103 aa2.26□□□□□ -2.05
NF1-208ENST00000471572 RPL37P61927 97 aaKnown RBP2.25□□□□□ -2.05
NF1-208ENST00000471572 SMIM11BQ8TCY0 68 aa2.25□□□□□ -2.05
NF1-208ENST00000471572 H0YGX0 51 aa2.25□□□□□ -2.05
NF1-208ENST00000471572 BVES-AS1Q5T3Y7 98 aa2.25□□□□□ -2.05
NF1-208ENST00000471572 UBR4Q5T4S7 5183 aa2.24□□□□□ -2.05
NF1-208ENST00000471572 RNF213Q63HN8 5207 aa2.24□□□□□ -2.05
NF1-208ENST00000471572 LCE3AQ5TA76 89 aa2.24□□□□□ -2.05
NF1-208ENST00000471572 Q6JHZ5 121 aa2.23□□□□□ -2.05
NF1-208ENST00000471572 LRP2P98164 4655 aa2.23□□□□□ -2.05
NF1-208ENST00000471572 A0A087WVE0 104 aa2.22□□□□□ -2.05
NF1-208ENST00000471572 KRTAP5-9P26371 169 aa2.2□□□□□ -2.06
NF1-208ENST00000471572 DEFB105AQ8NG35 78 aa2.2□□□□□ -2.06
NF1-208ENST00000471572 MUC17Q685J3 4493 aa2.19□□□□□ -2.06
NF1-208ENST00000471572 TRBV7-4A0A0J9YYF1 115 aa2.15□□□□□ -2.06
NF1-208ENST00000471572 LINC00643Q86TS7 51 aa2.15□□□□□ -2.06
NF1-208ENST00000471572 LPAP08519 4548 aa2.14□□□□□ -2.07
NF1-208ENST00000471572 H3BUT2 72 aa2.14□□□□□ -2.07
NF1-208ENST00000471572 LINC00846Q9NV44 126 aa2.14□□□□□ -2.07
NF1-208ENST00000471572 ATXN8Q156A1 80 aa2.13□□□□□ -2.07
NF1-208ENST00000471572 KRTAP5-5Q701N2 237 aaPredicted RBP2.12□□□□□ -2.07
NF1-208ENST00000471572 FAT4Q6V0I7 4981 aa2.11□□□□□ -2.07
NF1-208ENST00000471572 SPINK7P58062 85 aa2.1□□□□□ -2.07
NF1-208ENST00000471572 ACYP1P07311 99 aa2.1□□□□□ -2.07
NF1-208ENST00000471572 C9orf92A6NGG3 77 aa2.09□□□□□ -2.07
NF1-208ENST00000471572 GPR98Q8WXG9 6306 aa2.09□□□□□ -2.08
NF1-208ENST00000471572 KRTAP4-1Q9BYQ7 146 aa2.08□□□□□ -2.08
NF1-208ENST00000471572 MUC2Q02817 5179 aa2.08□□□□□ -2.08
NF1-208ENST00000471572 SPATA8Q6RVD6 105 aa2.07□□□□□ -2.08
NF1-208ENST00000471572 FLGP20930 4061 aaPredicted RBP2.06□□□□□ -2.08
NF1-208ENST00000471572 NDUFB1O75438 58 aa2.06□□□□□ -2.08
NF1-208ENST00000471572 KRTAP19-2Q3LHN2 52 aa2.06□□□□□ -2.08
NF1-208ENST00000471572 NREPQ16612 68 aa2.05□□□□□ -2.08
NF1-208ENST00000471572 H0Y9P7 68 aa2.03□□□□□ -2.08
NF1-208ENST00000471572 MT1HP80294 61 aa2.02□□□□□ -2.09
NF1-208ENST00000471572 KRTAP5-1Q6L8H4 278 aa2.01□□□□□ -2.09
NF1-208ENST00000471572 COX6B2Q6YFQ2 88 aa2.01□□□□□ -2.09
NF1-208ENST00000471572 MMP24-AS1A0A0U1RRL7 71 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms