RNA–Protein interactions for RNA: ENST00000471474.5

SEMA3A-206, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 688 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-206ENST00000471474 LEAP2Q969E1 77 aa0.51□□□□□ -2.33
SEMA3A-206ENST00000471474 NOP10Q9NPE3 64 aaKnown RBP0.51□□□□□ -2.33
SEMA3A-206ENST00000471474 MXRA5Q9NR99 2828 aa0.51□□□□□ -2.33
SEMA3A-206ENST00000471474 KAAG1Q9UBP8 84 aa0.51□□□□□ -2.33
SEMA3A-206ENST00000471474 DMBT1Q9UGM3 2413 aaPredicted RBP0.51□□□□□ -2.33
SEMA3A-206ENST00000471474 EP400Q96L91 3159 aa0.51□□□□□ -2.33
SEMA3A-206ENST00000471474 C5orf42Q9H799 3197 aa0.51□□□□□ -2.33
SEMA3A-206ENST00000471474 COL12A1Q99715 3063 aa0.51□□□□□ -2.33
SEMA3A-206ENST00000471474 HIVEP1P15822 2718 aa0.51□□□□□ -2.33
SEMA3A-206ENST00000471474 FLNCQ14315 2725 aa0.51□□□□□ -2.33
SEMA3A-206ENST00000471474 DNAH7Q8WXX0 4024 aa0.5□□□□□ -2.33
SEMA3A-206ENST00000471474 BRCA2P51587 3418 aa0.5□□□□□ -2.33
SEMA3A-206ENST00000471474 CDH23Q9H251 3354 aa0.5□□□□□ -2.33
SEMA3A-206ENST00000471474 WDFY4Q6ZS81 3184 aa0.5□□□□□ -2.33
SEMA3A-206ENST00000471474 DNAH5Q8TE73 4624 aa0.5□□□□□ -2.33
SEMA3A-206ENST00000471474 TACC2O95359 2948 aa0.5□□□□□ -2.33
SEMA3A-206ENST00000471474 PKD1P98161 4303 aa0.5□□□□□ -2.33
SEMA3A-206ENST00000471474 ZNF292O60281 2723 aa0.5□□□□□ -2.33
SEMA3A-206ENST00000471474 VPS13BQ7Z7G8 4022 aa0.5□□□□□ -2.33
SEMA3A-206ENST00000471474 FRAS1Q86XX4 4008 aa0.5□□□□□ -2.33
SEMA3A-206ENST00000471474 ITPR3Q14573 2671 aa0.5□□□□□ -2.33
SEMA3A-206ENST00000471474 GCN1Q92616 2671 aaKnown RBP0.5□□□□□ -2.33
SEMA3A-206ENST00000471474 H0YGG7 62 aa0.5□□□□□ -2.33
SEMA3A-206ENST00000471474 CLPSL2Q6UWE3 100 aa0.5□□□□□ -2.33
SEMA3A-206ENST00000471474 WFDC10BQ8IUB3 73 aa0.5□□□□□ -2.33
SEMA3A-206ENST00000471474 LYSTQ99698 3801 aa0.5□□□□□ -2.33
SEMA3A-206ENST00000471474 FREM2Q5SZK8 3169 aa0.5□□□□□ -2.33
SEMA3A-206ENST00000471474 DMXL1Q9Y485 3027 aa0.5□□□□□ -2.33
SEMA3A-206ENST00000471474 PDZD2O15018 2839 aa0.5□□□□□ -2.33
SEMA3A-206ENST00000471474 TEX15Q9BXT5 2789 aa0.5□□□□□ -2.33
SEMA3A-206ENST00000471474 ITPR2Q14571 2701 aa0.5□□□□□ -2.33
SEMA3A-206ENST00000471474 COL6A5A8TX70 2615 aa0.5□□□□□ -2.33
SEMA3A-206ENST00000471474 VCANP13611 3396 aa0.49□□□□□ -2.33
SEMA3A-206ENST00000471474 CENPEQ02224 2701 aa0.49□□□□□ -2.33
SEMA3A-206ENST00000471474 ANKRD11Q6UB99 2663 aaPredicted RBP0.49□□□□□ -2.33
SEMA3A-206ENST00000471474 UNC79Q9P2D8 2635 aa0.49□□□□□ -2.33
SEMA3A-206ENST00000471474 FAT3Q8TDW7 4589 aa0.49□□□□□ -2.33
SEMA3A-206ENST00000471474 DEFB108AA8MXU0 73 aa0.49□□□□□ -2.33
SEMA3A-206ENST00000471474 SPINK6Q6UWN8 80 aa0.49□□□□□ -2.33
SEMA3A-206ENST00000471474 VPS13CQ709C8 3753 aa0.49□□□□□ -2.33
SEMA3A-206ENST00000471474 CSMD3Q7Z407 3707 aa0.49□□□□□ -2.33
SEMA3A-206ENST00000471474 CELSR1Q9NYQ6 3014 aa0.49□□□□□ -2.33
SEMA3A-206ENST00000471474 NIPBLQ6KC79 2804 aaeCLIP0.49□□□□□ -2.33
SEMA3A-206ENST00000471474 DCHS1Q96JQ0 3298 aa0.49□□□□□ -2.33
SEMA3A-206ENST00000471474 MYO18BQ8IUG5 2567 aa0.49□□□□□ -2.33
SEMA3A-206ENST00000471474 CSMD1Q96PZ7 3565 aa0.49□□□□□ -2.33
SEMA3A-206ENST00000471474 FASNP49327 2511 aaKnown RBP0.48□□□□□ -2.33
SEMA3A-206ENST00000471474 HECTD4Q9Y4D8 3996 aa0.48□□□□□ -2.33
SEMA3A-206ENST00000471474 FAT2Q9NYQ8 4349 aa0.48□□□□□ -2.33
SEMA3A-206ENST00000471474 TENM4Q6N022 2769 aa0.48□□□□□ -2.33
SEMA3A-206ENST00000471474 NBEAL2Q6ZNJ1 2754 aa0.48□□□□□ -2.33
SEMA3A-206ENST00000471474 LOC400499M0QZD8 3231 aa0.48□□□□□ -2.33
SEMA3A-206ENST00000471474 MDN1Q9NU22 5596 aa0.48□□□□□ -2.33
SEMA3A-206ENST00000471474 STATHP02808 62 aa0.48□□□□□ -2.33
SEMA3A-206ENST00000471474 PLECQ15149 4684 aaKnown RBP0.48□□□□□ -2.33
SEMA3A-206ENST00000471474 FLGP20930 4061 aaPredicted RBP0.48□□□□□ -2.33
SEMA3A-206ENST00000471474 KMT2AQ03164 3969 aa0.48□□□□□ -2.33
SEMA3A-206ENST00000471474 LRP1Q07954 4544 aaKnown RBP0.48□□□□□ -2.33
SEMA3A-206ENST00000471474 CEP295Q9C0D2 2601 aa0.48□□□□□ -2.33
SEMA3A-206ENST00000471474 DYNC1H1Q14204 4646 aaKnown RBP0.47□□□□□ -2.33
SEMA3A-206ENST00000471474 MACF1Q9UPN3 7388 aaKnown RBP0.47□□□□□ -2.33
SEMA3A-206ENST00000471474 FLNBO75369 2602 aaKnown RBP0.47□□□□□ -2.33
SEMA3A-206ENST00000471474 SVEP1Q4LDE5 3571 aa0.47□□□□□ -2.33
SEMA3A-206ENST00000471474 DCHS2Q6V1P9 2916 aa0.47□□□□□ -2.33
SEMA3A-206ENST00000471474 PHGR1C9JFL3 82 aa0.47□□□□□ -2.33
SEMA3A-206ENST00000471474 KRTAP2-3P0C7H8 128 aa0.47□□□□□ -2.33
SEMA3A-206ENST00000471474 KRTAP2-4Q9BYR9 128 aa0.47□□□□□ -2.33
SEMA3A-206ENST00000471474 KRTAP2-1Q9BYU5 128 aa0.47□□□□□ -2.33
SEMA3A-206ENST00000471474 ADGRG4Q8IZF6 3080 aa0.47□□□□□ -2.33
SEMA3A-206ENST00000471474 TEP1Q99973 2627 aaKnown RBP0.47□□□□□ -2.33
SEMA3A-206ENST00000471474 MGAM2Q2M2H8 2515 aa0.46□□□□□ -2.34
SEMA3A-206ENST00000471474 ACACBO00763 2458 aa0.46□□□□□ -2.34
SEMA3A-206ENST00000471474 CSMD2Q7Z408 3487 aa0.46□□□□□ -2.34
SEMA3A-206ENST00000471474 CUBNO60494 3623 aa0.46□□□□□ -2.34
SEMA3A-206ENST00000471474 STAB1Q9NY15 2570 aa0.46□□□□□ -2.34
SEMA3A-206ENST00000471474 FSIP2Q5CZC0 6907 aa0.46□□□□□ -2.34
SEMA3A-206ENST00000471474 Q9Y3F1 56 aa0.46□□□□□ -2.34
SEMA3A-206ENST00000471474 PKHD1P08F94 4074 aa0.46□□□□□ -2.34
SEMA3A-206ENST00000471474 TGP01266 2768 aa0.45□□□□□ -2.34
SEMA3A-206ENST00000471474 COL7A1Q02388 2944 aa0.45□□□□□ -2.34
SEMA3A-206ENST00000471474 NSD1Q96L73 2696 aaPredicted RBP0.45□□□□□ -2.34
SEMA3A-206ENST00000471474 TNXBP22105 4242 aa0.45□□□□□ -2.34
SEMA3A-206ENST00000471474 HRNRQ86YZ3 2850 aaPredicted RBP0.45□□□□□ -2.34
SEMA3A-206ENST00000471474 LPAP08519 4548 aa0.45□□□□□ -2.34
SEMA3A-206ENST00000471474 M0QZ58 72 aa0.45□□□□□ -2.34
SEMA3A-206ENST00000471474 M0R2T5 61 aa0.45□□□□□ -2.34
SEMA3A-206ENST00000471474 SPINK1P00995 79 aa0.45□□□□□ -2.34
SEMA3A-206ENST00000471474 DEFB104AQ8WTQ1 72 aa0.45□□□□□ -2.34
SEMA3A-206ENST00000471474 TOMM7Q9P0U1 55 aa0.45□□□□□ -2.34
SEMA3A-206ENST00000471474 FAT1Q14517 4588 aa0.45□□□□□ -2.34
SEMA3A-206ENST00000471474 MUC17Q685J3 4493 aa0.45□□□□□ -2.34
SEMA3A-206ENST00000471474 MAST4O15021 2626 aa0.45□□□□□ -2.34
SEMA3A-206ENST00000471474 FLNAP21333 2647 aaKnown RBP0.45□□□□□ -2.34
SEMA3A-206ENST00000471474 PKD1L1Q8TDX9 2849 aa0.45□□□□□ -2.34
SEMA3A-206ENST00000471474 ZANQ9Y493 2812 aa0.45□□□□□ -2.34
SEMA3A-206ENST00000471474 STAB2Q8WWQ8 2551 aa0.44□□□□□ -2.34
SEMA3A-206ENST00000471474 H3BUX3 64 aa0.44□□□□□ -2.34
SEMA3A-206ENST00000471474 DEFB1P60022 68 aa0.44□□□□□ -2.34
SEMA3A-206ENST00000471474 DEFB135Q30KP9 77 aa0.44□□□□□ -2.34
SEMA3A-206ENST00000471474 DEFB110Q30KQ9 67 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms