RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 SPEGQ15772 3267 aa-0.36□□□□□ -2.47
SMC5-202ENST00000471372 DNAH14Q0VDD8 3507 aa-0.37□□□□□ -2.47
SMC5-202ENST00000471372 ZC3H13Q5T200 1668 aaKnown RBP-0.37□□□□□ -2.47
SMC5-202ENST00000471372 ASXL1Q8IXJ9 1541 aa-0.38□□□□□ -2.47
SMC5-202ENST00000471372 ABCA9Q8IUA7 1624 aa-0.38□□□□□ -2.47
SMC5-202ENST00000471372 CDC42BPAQ5VT25 1732 aa-0.38□□□□□ -2.47
SMC5-202ENST00000471372 SMR3BP02814 79 aaPredicted RBP-0.38□□□□□ -2.47
SMC5-202ENST00000471372 MT1EP04732 61 aa-0.38□□□□□ -2.47
SMC5-202ENST00000471372 THOC2Q8NI27 1593 aaKnown RBP-0.38□□□□□ -2.47
SMC5-202ENST00000471372 TOGARAM1Q9Y4F4 1720 aa-0.38□□□□□ -2.47
SMC5-202ENST00000471372 MT1HL1P0DM35 61 aa-0.39□□□□□ -2.47
SMC5-202ENST00000471372 DEFB1P60022 68 aa-0.39□□□□□ -2.47
SMC5-202ENST00000471372 PRLHP81277 87 aa-0.39□□□□□ -2.47
SMC5-202ENST00000471372 KRTAP8-1Q8IUC2 63 aa-0.39□□□□□ -2.47
SMC5-202ENST00000471372 MT1LQ93083 61 aa-0.39□□□□□ -2.47
SMC5-202ENST00000471372 GNG13Q9P2W3 67 aa-0.39□□□□□ -2.47
SMC5-202ENST00000471372 S4R3F8 94 aa-0.39□□□□□ -2.47
SMC5-202ENST00000471372 LY75O60449 1722 aa-0.39□□□□□ -2.47
SMC5-202ENST00000471372 ITSN2Q9NZM3 1697 aa-0.4□□□□□ -2.47
SMC5-202ENST00000471372 ETDCA0A1B0GVM5 59 aa-0.4□□□□□ -2.47
SMC5-202ENST00000471372 UNC80Q8N2C7 3258 aa-0.41□□□□□ -2.47
SMC5-202ENST00000471372 A0A1B0GUL6 1792 aa-0.41□□□□□ -2.47
SMC5-202ENST00000471372 DEFB110Q30KQ9 67 aa-0.41□□□□□ -2.48
SMC5-202ENST00000471372 MKI67P46013 3256 aaKnown RBP-0.41□□□□□ -2.48
SMC5-202ENST00000471372 DCHS1Q96JQ0 3298 aa-0.41□□□□□ -2.48
SMC5-202ENST00000471372 NHSQ6T4R5 1651 aa-0.42□□□□□ -2.48
SMC5-202ENST00000471372 DNAH12Q6ZR08 3092 aa-0.42□□□□□ -2.48
SMC5-202ENST00000471372 MT1MQ8N339 61 aa-0.42□□□□□ -2.48
SMC5-202ENST00000471372 VCANP13611 3396 aa-0.42□□□□□ -2.48
SMC5-202ENST00000471372 KIF1AQ12756 1690 aa-0.43□□□□□ -2.48
SMC5-202ENST00000471372 CFAP47Q6ZTR5 3102 aa-0.43□□□□□ -2.48
SMC5-202ENST00000471372 MT2AP02795 61 aa-0.43□□□□□ -2.48
SMC5-202ENST00000471372 MT1GP13640 62 aa-0.43□□□□□ -2.48
SMC5-202ENST00000471372 MUC3AQ02505 3323 aa-0.43□□□□□ -2.48
SMC5-202ENST00000471372 WDFY4Q6ZS81 3184 aa-0.43□□□□□ -2.48
SMC5-202ENST00000471372 EP400Q96L91 3159 aa-0.43□□□□□ -2.48
SMC5-202ENST00000471372 IGLV5-48A0A075B6I7 105 aa-0.44□□□□□ -2.48
SMC5-202ENST00000471372 MMP24-AS1A0A0U1RRL7 71 aa-0.44□□□□□ -2.48
SMC5-202ENST00000471372 MT1BP07438 61 aa-0.44□□□□□ -2.48
SMC5-202ENST00000471372 TNP1P09430 55 aa-0.44□□□□□ -2.48
SMC5-202ENST00000471372 CLPSL2Q6UWE3 100 aa-0.44□□□□□ -2.48
SMC5-202ENST00000471372 INO80Q9ULG1 1556 aaPredicted RBP-0.45□□□□□ -2.48
SMC5-202ENST00000471372 MAST1Q9Y2H9 1570 aa-0.45□□□□□ -2.48
SMC5-202ENST00000471372 XIRP2A4UGR9 3374 aa-0.45□□□□□ -2.48
SMC5-202ENST00000471372 WT1-ASQ06250 92 aa-0.45□□□□□ -2.48
SMC5-202ENST00000471372 DEFB106AQ8N104 65 aa-0.45□□□□□ -2.48
SMC5-202ENST00000471372 KIAA0586Q9BVV6 1533 aa-0.45□□□□□ -2.48
SMC5-202ENST00000471372 LOC400499M0QZD8 3231 aa-0.46□□□□□ -2.48
SMC5-202ENST00000471372 CENPFP49454 3210 aa-0.46□□□□□ -2.48
SMC5-202ENST00000471372 RPS27P42677 84 aaKnown RBP-0.46□□□□□ -2.48
SMC5-202ENST00000471372 KRTAP20-1Q3LI63 56 aa-0.46□□□□□ -2.48
SMC5-202ENST00000471372 RPS27LQ71UM5 84 aaKnown RBP-0.46□□□□□ -2.48
SMC5-202ENST00000471372 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.46□□□□□ -2.48
SMC5-202ENST00000471372 ASPMQ8IZT6 3477 aa-0.47□□□□□ -2.48
SMC5-202ENST00000471372 C3P01024 1663 aa-0.47□□□□□ -2.48
SMC5-202ENST00000471372 FAM208AQ9UK61 1670 aaKnown RBP-0.47□□□□□ -2.48
SMC5-202ENST00000471372 CROCC2H7BZ55 1655 aa-0.48□□□□□ -2.49
SMC5-202ENST00000471372 CLASP1Q7Z460 1538 aa-0.48□□□□□ -2.49
SMC5-202ENST00000471372 M0QZ58 72 aa-0.49□□□□□ -2.49
SMC5-202ENST00000471372 KIF21BO75037 1637 aa-0.49□□□□□ -2.49
SMC5-202ENST00000471372 MROH1Q8NDA8 1641 aa-0.49□□□□□ -2.49
SMC5-202ENST00000471372 A8MTW9 85 aa-0.5□□□□□ -2.49
SMC5-202ENST00000471372 H3BUA1 57 aa-0.5□□□□□ -2.49
SMC5-202ENST00000471372 NCBP2-AS2Q69YL0 99 aa-0.5□□□□□ -2.49
SMC5-202ENST00000471372 NOP10Q9NPE3 64 aaKnown RBP-0.5□□□□□ -2.49
SMC5-202ENST00000471372 DNMBPQ6XZF7 1577 aa-0.5□□□□□ -2.49
SMC5-202ENST00000471372 MADDQ8WXG6 1647 aa-0.5□□□□□ -2.49
SMC5-202ENST00000471372 ALS2Q96Q42 1657 aa-0.5□□□□□ -2.49
SMC5-202ENST00000471372 LINC01546A6NGU7 62 aa-0.51□□□□□ -2.49
SMC5-202ENST00000471372 DEFB4AO15263 64 aa-0.51□□□□□ -2.49
SMC5-202ENST00000471372 MT1FP04733 61 aa-0.51□□□□□ -2.49
SMC5-202ENST00000471372 DEFB114Q30KQ6 69 aa-0.51□□□□□ -2.49
SMC5-202ENST00000471372 MINOS1Q5TGZ0 78 aa-0.51□□□□□ -2.49
SMC5-202ENST00000471372 PREX2Q70Z35 1606 aa-0.52□□□□□ -2.49
SMC5-202ENST00000471372 M0QY20 66 aa-0.52□□□□□ -2.49
SMC5-202ENST00000471372 C6orf48Q9UBA6 75 aa-0.52□□□□□ -2.49
SMC5-202ENST00000471372 BRCA2P51587 3418 aa-0.52□□□□□ -2.49
SMC5-202ENST00000471372 VPS13AQ96RL7 3174 aa-0.53□□□□□ -2.49
SMC5-202ENST00000471372 GLI2P10070 1586 aa-0.53□□□□□ -2.49
SMC5-202ENST00000471372 TIAM1Q13009 1591 aa-0.53□□□□□ -2.49
SMC5-202ENST00000471372 ABCC6O95255 1503 aa-0.53□□□□□ -2.49
SMC5-202ENST00000471372 SFTA3P0C7M3 94 aa-0.53□□□□□ -2.49
SMC5-202ENST00000471372 SPART-AS1P0CW21 52 aa-0.54□□□□□ -2.5
SMC5-202ENST00000471372 LMO7Q8WWI1 1683 aa-0.54□□□□□ -2.5
SMC5-202ENST00000471372 FCER1GP30273 86 aa-0.55□□□□□ -2.5
SMC5-202ENST00000471372 RPS29P62273 56 aaKnown RBP-0.55□□□□□ -2.5
SMC5-202ENST00000471372 DEFB136Q30KP8 78 aa-0.55□□□□□ -2.5
SMC5-202ENST00000471372 KRTAP19-6Q3LI70 58 aa-0.55□□□□□ -2.5
SMC5-202ENST00000471372 LEAP2Q969E1 77 aa-0.55□□□□□ -2.5
SMC5-202ENST00000471372 DDX60Q8IY21 1712 aaKnown RBP-0.55□□□□□ -2.5
SMC5-202ENST00000471372 CDH23Q9H251 3354 aa-0.56□□□□□ -2.5
SMC5-202ENST00000471372 MROH2AA6NES4 1674 aa-0.56□□□□□ -2.5
SMC5-202ENST00000471372 K7EMI3 77 aa-0.57□□□□□ -2.5
SMC5-202ENST00000471372 KAAG1Q9UBP8 84 aa-0.57□□□□□ -2.5
SMC5-202ENST00000471372 ABCA6Q8N139 1617 aa-0.57□□□□□ -2.5
SMC5-202ENST00000471372 SMIM27A0A1W2PRY6 76 aa-0.59□□□□□ -2.5
SMC5-202ENST00000471372 LINC01549A6NIU2 74 aa-0.59□□□□□ -2.5
SMC5-202ENST00000471372 IGIPA6NJ69 53 aa-0.59□□□□□ -2.5
SMC5-202ENST00000471372 POLR2KP53803 58 aaKnown RBP-0.59□□□□□ -2.5
SMC5-202ENST00000471372 LINC00308Q8TCZ7 52 aa-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 467.6 ms