RNA–Protein interactions for RNA: ENST00000470305.1

SECISBP2-205, Transcript of SECIS binding protein 2, humanhuman

TSL 1 (best)

Gene SECISBP2, Length 5,405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SECISBP2-205ENST00000470305 DNAH11Q96DT5 4516 aa4.04□□□□□ -1.76
SECISBP2-205ENST00000470305 DYNC2H1Q8NCM8 4307 aaKnown RBP4.02□□□□□ -1.77
SECISBP2-205ENST00000470305 PLECQ15149 4684 aaKnown RBP4.01□□□□□ -1.77
SECISBP2-205ENST00000470305 DNAH3Q8TD57 4116 aa4.01□□□□□ -1.77
SECISBP2-205ENST00000470305 DNAH10Q8IVF4 4471 aa4□□□□□ -1.77
SECISBP2-205ENST00000470305 VPS13DQ5THJ4 4388 aa4□□□□□ -1.77
SECISBP2-205ENST00000470305 DNAH6Q9C0G6 4158 aa4□□□□□ -1.77
SECISBP2-205ENST00000470305 PRKDCP78527 4128 aaKnown RBP3.96□□□□□ -1.78
SECISBP2-205ENST00000470305 CMYA5Q8N3K9 4069 aa3.94□□□□□ -1.78
SECISBP2-205ENST00000470305 COL7A1Q02388 2944 aa3.93□□□□□ -1.78
SECISBP2-205ENST00000470305 DYNC1H1Q14204 4646 aaKnown RBP3.89□□□□□ -1.79
SECISBP2-205ENST00000470305 DNAH17Q9UFH2 4485 aa3.89□□□□□ -1.79
SECISBP2-205ENST00000470305 DNAH5Q8TE73 4624 aa3.87□□□□□ -1.79
SECISBP2-205ENST00000470305 STARD9Q9P2P6 4700 aa3.86□□□□□ -1.79
SECISBP2-205ENST00000470305 KRTAP3-2Q9BYR7 98 aa3.86□□□□□ -1.79
SECISBP2-205ENST00000470305 BIRC6Q9NR09 4857 aa3.86□□□□□ -1.79
SECISBP2-205ENST00000470305 RYR2Q92736 4967 aa3.82□□□□□ -1.8
SECISBP2-205ENST00000470305 FAT2Q9NYQ8 4349 aa3.82□□□□□ -1.8
SECISBP2-205ENST00000470305 KRTAP10-12P60413 245 aa3.8□□□□□ -1.8
SECISBP2-205ENST00000470305 DNAH7Q8WXX0 4024 aa3.79□□□□□ -1.8
SECISBP2-205ENST00000470305 KRTAP12-3P60328 96 aa3.79□□□□□ -1.8
SECISBP2-205ENST00000470305 SACSQ9NZJ4 4579 aa3.78□□□□□ -1.8
SECISBP2-205ENST00000470305 CRCT1Q9UGL9 99 aa3.78□□□□□ -1.8
SECISBP2-205ENST00000470305 LRP1BQ9NZR2 4599 aa3.77□□□□□ -1.81
SECISBP2-205ENST00000470305 DNAH2Q9P225 4427 aa3.77□□□□□ -1.81
SECISBP2-205ENST00000470305 KRTAP3-3Q9BYR6 98 aa3.76□□□□□ -1.81
SECISBP2-205ENST00000470305 DNAH8Q96JB1 4490 aa3.73□□□□□ -1.81
SECISBP2-205ENST00000470305 KRTAP10-5P60370 271 aa3.72□□□□□ -1.81
SECISBP2-205ENST00000470305 RYR1P21817 5038 aa3.71□□□□□ -1.82
SECISBP2-205ENST00000470305 LCE3AQ5TA76 89 aa3.7□□□□□ -1.82
SECISBP2-205ENST00000470305 RYR3Q15413 4870 aa3.68□□□□□ -1.82
SECISBP2-205ENST00000470305 KRTAP17-1Q9BYP8 105 aa3.68□□□□□ -1.82
SECISBP2-205ENST00000470305 KMT2AQ03164 3969 aa3.63□□□□□ -1.83
SECISBP2-205ENST00000470305 APOBP04114 4563 aaKnown RBP3.62□□□□□ -1.83
SECISBP2-205ENST00000470305 KIAA1109Q2LD37 5005 aa3.61□□□□□ -1.83
SECISBP2-205ENST00000470305 FAT1Q14517 4588 aa3.58□□□□□ -1.84
SECISBP2-205ENST00000470305 HERC2O95714 4834 aa3.58□□□□□ -1.84
SECISBP2-205ENST00000470305 HSPG2P98160 4391 aa3.56□□□□□ -1.84
SECISBP2-205ENST00000470305 MT1HP80294 61 aa3.54□□□□□ -1.84
SECISBP2-205ENST00000470305 LYSTQ99698 3801 aa3.54□□□□□ -1.84
SECISBP2-205ENST00000470305 HYDINQ4G0P3 5121 aa3.54□□□□□ -1.84
SECISBP2-205ENST00000470305 CSMD3Q7Z407 3707 aa3.53□□□□□ -1.84
SECISBP2-205ENST00000470305 KRTAP4-1Q9BYQ7 146 aa3.52□□□□□ -1.85
SECISBP2-205ENST00000470305 VPS13BQ7Z7G8 4022 aa3.51□□□□□ -1.85
SECISBP2-205ENST00000470305 HECTD4Q9Y4D8 3996 aa3.51□□□□□ -1.85
SECISBP2-205ENST00000470305 KMT2CQ8NEZ4 4911 aaKnown RBP3.5□□□□□ -1.85
SECISBP2-205ENST00000470305 PKHD1L1Q86WI1 4243 aa3.5□□□□□ -1.85
SECISBP2-205ENST00000470305 PKD1P98161 4303 aa3.48□□□□□ -1.85
SECISBP2-205ENST00000470305 HERC1Q15751 4861 aa3.48□□□□□ -1.85
SECISBP2-205ENST00000470305 FAT3Q8TDW7 4589 aa3.47□□□□□ -1.85
SECISBP2-205ENST00000470305 LORP23490 312 aaPredicted RBP3.45□□□□□ -1.86
SECISBP2-205ENST00000470305 FRAS1Q86XX4 4008 aa3.45□□□□□ -1.86
SECISBP2-205ENST00000470305 PKHD1P08F94 4074 aa3.43□□□□□ -1.86
SECISBP2-205ENST00000470305 EPPK1P58107 5090 aaKnown RBP3.42□□□□□ -1.86
SECISBP2-205ENST00000470305 MYCBP2O75592 4640 aa3.41□□□□□ -1.86
SECISBP2-205ENST00000470305 PCLOQ9Y6V0 5065 aa3.4□□□□□ -1.87
SECISBP2-205ENST00000470305 MT2AP02795 61 aa3.39□□□□□ -1.87
SECISBP2-205ENST00000470305 ABCA13Q86UQ4 5058 aa3.32□□□□□ -1.88
SECISBP2-205ENST00000470305 LRP1Q07954 4544 aaKnown RBP3.31□□□□□ -1.88
SECISBP2-205ENST00000470305 MT1FP04733 61 aa3.3□□□□□ -1.88
SECISBP2-205ENST00000470305 SPRR2GQ9BYE4 73 aa3.29□□□□□ -1.88
SECISBP2-205ENST00000470305 LCE3CQ5T5A8 94 aa3.28□□□□□ -1.88
SECISBP2-205ENST00000470305 LCE2CQ5TA81 110 aa3.28□□□□□ -1.88
SECISBP2-205ENST00000470305 MUC17Q685J3 4493 aa3.27□□□□□ -1.89
SECISBP2-205ENST00000470305 LCE2DQ5TA82 110 aaPredicted RBP3.27□□□□□ -1.89
SECISBP2-205ENST00000470305 KRTAP8-1Q8IUC2 63 aa3.27□□□□□ -1.89
SECISBP2-205ENST00000470305 TNXBP22105 4242 aa3.26□□□□□ -1.89
SECISBP2-205ENST00000470305 KRTAP12-4P60329 112 aa3.24□□□□□ -1.89
SECISBP2-205ENST00000470305 LCE2AQ5TA79 106 aaPredicted RBP3.22□□□□□ -1.89
SECISBP2-205ENST00000470305 KRTAP9-2Q9BYQ4 174 aa3.21□□□□□ -1.9
SECISBP2-205ENST00000470305 KRTAP9-8Q9BYQ0 159 aa3.2□□□□□ -1.9
SECISBP2-205ENST00000470305 KRTAP19-2Q3LHN2 52 aa3.19□□□□□ -1.9
SECISBP2-205ENST00000470305 KRTAP19-4Q3LI73 84 aa3.18□□□□□ -1.9
SECISBP2-205ENST00000470305 KRTAP19-8Q3LI54 63 aa3.18□□□□□ -1.9
SECISBP2-205ENST00000470305 KRTAP19-5Q3LI72 72 aa3.17□□□□□ -1.9
SECISBP2-205ENST00000470305 SPRR5A0A1B0GTR4 108 aa3.17□□□□□ -1.9
SECISBP2-205ENST00000470305 KRTAP9-3Q9BYQ3 159 aa3.14□□□□□ -1.91
SECISBP2-205ENST00000470305 KRTAP9-6A0A140TA67 174 aa3.14□□□□□ -1.91
SECISBP2-205ENST00000470305 KRTAP10-7P60409 375 aaPredicted RBP3.13□□□□□ -1.91
SECISBP2-205ENST00000470305 HMCN2Q8NDA2 5059 aa3.12□□□□□ -1.91
SECISBP2-205ENST00000470305 LRP2P98164 4655 aa3.1□□□□□ -1.91
SECISBP2-205ENST00000470305 KRTAP19-1Q8IUB9 90 aa3.09□□□□□ -1.91
SECISBP2-205ENST00000470305 LCE3BQ5TA77 95 aa3.05□□□□□ -1.92
SECISBP2-205ENST00000470305 RNF213Q63HN8 5207 aa3.05□□□□□ -1.92
SECISBP2-205ENST00000470305 LPAP08519 4548 aa3.04□□□□□ -1.92
SECISBP2-205ENST00000470305 KRTAP19-6Q3LI70 58 aa3.03□□□□□ -1.92
SECISBP2-205ENST00000470305 MT1BP07438 61 aa3.03□□□□□ -1.92
SECISBP2-205ENST00000470305 SPRR2FQ96RM1 72 aa3.03□□□□□ -1.92
SECISBP2-205ENST00000470305 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
SECISBP2-205ENST00000470305 FLGP20930 4061 aaPredicted RBP3□□□□□ -1.93
SECISBP2-205ENST00000470305 LCE2BO14633 110 aa3□□□□□ -1.93
SECISBP2-205ENST00000470305 MT3P25713 68 aa3□□□□□ -1.93
SECISBP2-205ENST00000470305 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
SECISBP2-205ENST00000470305 FAT4Q6V0I7 4981 aa2.98□□□□□ -1.93
SECISBP2-205ENST00000470305 SPRR2EP22531 72 aa2.95□□□□□ -1.94
SECISBP2-205ENST00000470305 SPRR2BP35325 72 aa2.95□□□□□ -1.94
SECISBP2-205ENST00000470305 SPRR2AP35326 72 aa2.95□□□□□ -1.94
SECISBP2-205ENST00000470305 MT1XP80297 61 aa2.93□□□□□ -1.94
SECISBP2-205ENST00000470305 MT1GP13640 62 aa2.88□□□□□ -1.95
SECISBP2-205ENST00000470305 SPRR2DP22532 72 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 163.1 ms