RNA–Protein interactions for RNA: ENST00000468948.1

ITGA4-205, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 393 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-205ENST00000468948 Q6ZRX8 168 aa1.89□□□□□ -2.11
ITGA4-205ENST00000468948 SMIM11BQ8TCY0 68 aa1.89□□□□□ -2.11
ITGA4-205ENST00000468948 PLAC4Q8WY50 150 aa1.89□□□□□ -2.11
ITGA4-205ENST00000468948 CSMD3Q7Z407 3707 aa1.89□□□□□ -2.11
ITGA4-205ENST00000468948 PCLOQ9Y6V0 5065 aa1.89□□□□□ -2.11
ITGA4-205ENST00000468948 HYDINQ4G0P3 5121 aa1.87□□□□□ -2.11
ITGA4-205ENST00000468948 GVQW2A0A096LPI5 108 aaPredicted RBP1.87□□□□□ -2.11
ITGA4-205ENST00000468948 WT1-ASQ06250 92 aa1.87□□□□□ -2.11
ITGA4-205ENST00000468948 SSBP3-AS1Q7Z2R9 100 aa1.87□□□□□ -2.11
ITGA4-205ENST00000468948 TMEM167AQ8TBQ9 72 aa1.87□□□□□ -2.11
ITGA4-205ENST00000468948 SMIM2Q9BVW6 85 aa1.87□□□□□ -2.11
ITGA4-205ENST00000468948 CNFNQ9BYD5 112 aa1.87□□□□□ -2.11
ITGA4-205ENST00000468948 APLNQ9ULZ1 77 aa1.87□□□□□ -2.11
ITGA4-205ENST00000468948 DNAH9Q9NYC9 4486 aa1.86□□□□□ -2.11
ITGA4-205ENST00000468948 A0A096LPF7 62 aa1.86□□□□□ -2.11
ITGA4-205ENST00000468948 K7EIM0 57 aa1.86□□□□□ -2.11
ITGA4-205ENST00000468948 SMR3BP02814 79 aaPredicted RBP1.86□□□□□ -2.11
ITGA4-205ENST00000468948 SPART-AS1P0CW21 52 aa1.86□□□□□ -2.11
ITGA4-205ENST00000468948 CRIP1P50238 77 aa1.86□□□□□ -2.11
ITGA4-205ENST00000468948 DNAH3Q8TD57 4116 aa1.85□□□□□ -2.11
ITGA4-205ENST00000468948 STARD9Q9P2P6 4700 aa1.85□□□□□ -2.11
ITGA4-205ENST00000468948 IAPPP10997 89 aa1.85□□□□□ -2.11
ITGA4-205ENST00000468948 SPINK13Q1W4C9 94 aa1.85□□□□□ -2.11
ITGA4-205ENST00000468948 LINC00158P58513 81 aa1.84□□□□□ -2.11
ITGA4-205ENST00000468948 LINC00308Q8TCZ7 52 aa1.84□□□□□ -2.11
ITGA4-205ENST00000468948 DYNC2H1Q8NCM8 4307 aaKnown RBP1.84□□□□□ -2.11
ITGA4-205ENST00000468948 ALMS1Q8TCU4 4167 aa1.84□□□□□ -2.12
ITGA4-205ENST00000468948 HUWE1Q7Z6Z7 4374 aaKnown RBP1.84□□□□□ -2.12
ITGA4-205ENST00000468948 I3L2K1 104 aa1.83□□□□□ -2.12
ITGA4-205ENST00000468948 PRCDQ00LT1 54 aa1.83□□□□□ -2.12
ITGA4-205ENST00000468948 Q5VSD8 79 aa1.83□□□□□ -2.12
ITGA4-205ENST00000468948 Q8IZM0 81 aa1.83□□□□□ -2.12
ITGA4-205ENST00000468948 NOP10Q9NPE3 64 aaKnown RBP1.83□□□□□ -2.12
ITGA4-205ENST00000468948 KIAA1109Q2LD37 5005 aa1.82□□□□□ -2.12
ITGA4-205ENST00000468948 NDUFA1O15239 70 aa1.82□□□□□ -2.12
ITGA4-205ENST00000468948 FRAS1Q86XX4 4008 aa1.82□□□□□ -2.12
ITGA4-205ENST00000468948 LYSTQ99698 3801 aa1.81□□□□□ -2.12
ITGA4-205ENST00000468948 CDKN2A-AS1Q9UH64 79 aa1.81□□□□□ -2.12
ITGA4-205ENST00000468948 SACSQ9NZJ4 4579 aa1.8□□□□□ -2.12
ITGA4-205ENST00000468948 DNAH7Q8WXX0 4024 aa1.8□□□□□ -2.12
ITGA4-205ENST00000468948 DMBT1Q9UGM3 2413 aaPredicted RBP1.8□□□□□ -2.12
ITGA4-205ENST00000468948 ABCA13Q86UQ4 5058 aa1.79□□□□□ -2.12
ITGA4-205ENST00000468948 COX6B2Q6YFQ2 88 aa1.79□□□□□ -2.12
ITGA4-205ENST00000468948 WFDC10BQ8IUB3 73 aa1.79□□□□□ -2.12
ITGA4-205ENST00000468948 KRTAP4-1Q9BYQ7 146 aa1.79□□□□□ -2.12
ITGA4-205ENST00000468948 HERC2O95714 4834 aa1.79□□□□□ -2.12
ITGA4-205ENST00000468948 DNAH1Q9P2D7 4330 aa1.78□□□□□ -2.12
ITGA4-205ENST00000468948 RPL37P61927 97 aaKnown RBP1.78□□□□□ -2.12
ITGA4-205ENST00000468948 HECTD4Q9Y4D8 3996 aa1.77□□□□□ -2.13
ITGA4-205ENST00000468948 RYR1P21817 5038 aa1.76□□□□□ -2.13
ITGA4-205ENST00000468948 K7EQZ3 153 aa1.76□□□□□ -2.13
ITGA4-205ENST00000468948 CLPSL2Q6UWE3 100 aa1.76□□□□□ -2.13
ITGA4-205ENST00000468948 CRIPTQ9P021 101 aa1.76□□□□□ -2.13
ITGA4-205ENST00000468948 PLECQ15149 4684 aaKnown RBP1.75□□□□□ -2.13
ITGA4-205ENST00000468948 KLK9Q2XQG4 91 aa1.75□□□□□ -2.13
ITGA4-205ENST00000468948 DEFB104AQ8WTQ1 72 aa1.75□□□□□ -2.13
ITGA4-205ENST00000468948 TP53AIP1Q9HCN2 124 aa1.75□□□□□ -2.13
ITGA4-205ENST00000468948 SRRM2Q9UQ35 2752 aaKnown RBP1.75□□□□□ -2.13
ITGA4-205ENST00000468948 KMT2AQ03164 3969 aa1.74□□□□□ -2.13
ITGA4-205ENST00000468948 PRO0255Q9UI72 69 aa1.74□□□□□ -2.13
ITGA4-205ENST00000468948 PKHD1P08F94 4074 aa1.74□□□□□ -2.13
ITGA4-205ENST00000468948 FCGBPQ9Y6R7 5405 aaPredicted RBP1.73□□□□□ -2.13
ITGA4-205ENST00000468948 MRPL34Q9BQ48 92 aaKnown RBP1.72□□□□□ -2.13
ITGA4-205ENST00000468948 DNAH10Q8IVF4 4471 aa1.72□□□□□ -2.13
ITGA4-205ENST00000468948 A0A0D9SG42 100 aa1.7□□□□□ -2.14
ITGA4-205ENST00000468948 A8MTW9 85 aa1.7□□□□□ -2.14
ITGA4-205ENST00000468948 H3BNG1 76 aa1.7□□□□□ -2.14
ITGA4-205ENST00000468948 POLR2KP53803 58 aaKnown RBP1.7□□□□□ -2.14
ITGA4-205ENST00000468948 LELP1Q5T871 98 aa1.7□□□□□ -2.14
ITGA4-205ENST00000468948 PKD1P98161 4303 aa1.7□□□□□ -2.14
ITGA4-205ENST00000468948 UBR4Q5T4S7 5183 aa1.7□□□□□ -2.14
ITGA4-205ENST00000468948 VPS13DQ5THJ4 4388 aa1.69□□□□□ -2.14
ITGA4-205ENST00000468948 HERC1Q15751 4861 aa1.69□□□□□ -2.14
ITGA4-205ENST00000468948 H0YAA0 97 aa1.69□□□□□ -2.14
ITGA4-205ENST00000468948 LINC01556Q5JQF7 62 aa1.69□□□□□ -2.14
ITGA4-205ENST00000468948 C6orf48Q9UBA6 75 aa1.69□□□□□ -2.14
ITGA4-205ENST00000468948 DNAH2Q9P225 4427 aa1.68□□□□□ -2.14
ITGA4-205ENST00000468948 HSPG2P98160 4391 aa1.68□□□□□ -2.14
ITGA4-205ENST00000468948 FAT2Q9NYQ8 4349 aa1.67□□□□□ -2.14
ITGA4-205ENST00000468948 IGLV5-48A0A075B6I7 105 aa1.67□□□□□ -2.14
ITGA4-205ENST00000468948 COX6A2Q02221 97 aa1.67□□□□□ -2.14
ITGA4-205ENST00000468948 DYNC1H1Q14204 4646 aaKnown RBP1.67□□□□□ -2.14
ITGA4-205ENST00000468948 MYCBP2O75592 4640 aa1.66□□□□□ -2.14
ITGA4-205ENST00000468948 DNAH11Q96DT5 4516 aa1.66□□□□□ -2.14
ITGA4-205ENST00000468948 APOBP04114 4563 aaKnown RBP1.66□□□□□ -2.14
ITGA4-205ENST00000468948 DNAH6Q9C0G6 4158 aa1.66□□□□□ -2.14
ITGA4-205ENST00000468948 A0A096LNI7 61 aa1.64□□□□□ -2.15
ITGA4-205ENST00000468948 DNAH17Q9UFH2 4485 aa1.63□□□□□ -2.15
ITGA4-205ENST00000468948 MT1HL1P0DM35 61 aa1.63□□□□□ -2.15
ITGA4-205ENST00000468948 RPL39P62891 51 aaKnown RBP1.63□□□□□ -2.15
ITGA4-205ENST00000468948 RPL39LQ96EH5 51 aaKnown RBP1.63□□□□□ -2.15
ITGA4-205ENST00000468948 LRP1BQ9NZR2 4599 aa1.62□□□□□ -2.15
ITGA4-205ENST00000468948 DNAH5Q8TE73 4624 aa1.62□□□□□ -2.15
ITGA4-205ENST00000468948 RNF213Q63HN8 5207 aa1.62□□□□□ -2.15
ITGA4-205ENST00000468948 WFDC13Q8IUB5 93 aa1.61□□□□□ -2.15
ITGA4-205ENST00000468948 C10orf95Q9H7T3 257 aa1.61□□□□□ -2.15
ITGA4-205ENST00000468948 H1FX-AS1Q4G0G2 97 aa1.6□□□□□ -2.15
ITGA4-205ENST00000468948 SPINK6Q6UWN8 80 aa1.6□□□□□ -2.15
ITGA4-205ENST00000468948 TOMM7Q9P0U1 55 aa1.6□□□□□ -2.15
ITGA4-205ENST00000468948 FAT1Q14517 4588 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms