RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 IGLV5-48A0A075B6I7 105 aa1.03□□□□□ -2.24
XRN1-207ENST00000468894 A0A0D9SG42 100 aa1.03□□□□□ -2.24
XRN1-207ENST00000468894 LINC01590Q5TEZ4 76 aa1.03□□□□□ -2.24
XRN1-207ENST00000468894 MMP24-AS1A0A0U1RRL7 71 aa1.02□□□□□ -2.25
XRN1-207ENST00000468894 WT1-ASQ06250 92 aa1.02□□□□□ -2.25
XRN1-207ENST00000468894 LEAP2Q969E1 77 aa1.02□□□□□ -2.25
XRN1-207ENST00000468894 CSMD2Q7Z408 3487 aa1.02□□□□□ -2.25
XRN1-207ENST00000468894 STAB2Q8WWQ8 2551 aa1.02□□□□□ -2.25
XRN1-207ENST00000468894 LYSTQ99698 3801 aa1.01□□□□□ -2.25
XRN1-207ENST00000468894 CSMD3Q7Z407 3707 aa1.01□□□□□ -2.25
XRN1-207ENST00000468894 SVEP1Q4LDE5 3571 aa1.01□□□□□ -2.25
XRN1-207ENST00000468894 DMXL2Q8TDJ6 3036 aa1.01□□□□□ -2.25
XRN1-207ENST00000468894 ANK2Q01484 3957 aa1.01□□□□□ -2.25
XRN1-207ENST00000468894 APCP25054 2843 aa1.01□□□□□ -2.25
XRN1-207ENST00000468894 AHNAKQ09666 5890 aaKnown RBP1□□□□□ -2.25
XRN1-207ENST00000468894 ACACAQ13085 2346 aa1□□□□□ -2.25
XRN1-207ENST00000468894 SONP18583 2426 aaKnown RBP0.99□□□□□ -2.25
XRN1-207ENST00000468894 FAM186AA6NE01 2351 aa0.99□□□□□ -2.25
XRN1-207ENST00000468894 S4R3F8 94 aa0.99□□□□□ -2.25
XRN1-207ENST00000468894 CUBNO60494 3623 aa0.99□□□□□ -2.25
XRN1-207ENST00000468894 ITPR2Q14571 2701 aa0.98□□□□□ -2.25
XRN1-207ENST00000468894 AKAP6Q13023 2319 aa0.98□□□□□ -2.25
XRN1-207ENST00000468894 MUC5BQ9HC84 5762 aaPredicted RBP0.98□□□□□ -2.25
XRN1-207ENST00000468894 H3BUA1 57 aa0.98□□□□□ -2.25
XRN1-207ENST00000468894 PRLHP81277 87 aa0.98□□□□□ -2.25
XRN1-207ENST00000468894 ATMQ13315 3056 aa0.97□□□□□ -2.25
XRN1-207ENST00000468894 COL7A1Q02388 2944 aa0.97□□□□□ -2.25
XRN1-207ENST00000468894 DMDP11532 3685 aa0.96□□□□□ -2.26
XRN1-207ENST00000468894 A8MTW9 85 aa0.96□□□□□ -2.26
XRN1-207ENST00000468894 DEFB131AP59861 70 aa0.96□□□□□ -2.26
XRN1-207ENST00000468894 HIVEP1P15822 2718 aa0.96□□□□□ -2.26
XRN1-207ENST00000468894 DMBT1Q9UGM3 2413 aaPredicted RBP0.96□□□□□ -2.26
XRN1-207ENST00000468894 RNF213Q63HN8 5207 aa0.95□□□□□ -2.26
XRN1-207ENST00000468894 ADGRG4Q8IZF6 3080 aa0.95□□□□□ -2.26
XRN1-207ENST00000468894 PRKDCP78527 4128 aaKnown RBP0.95□□□□□ -2.26
XRN1-207ENST00000468894 CLPSL2Q6UWE3 100 aa0.95□□□□□ -2.26
XRN1-207ENST00000468894 DEFB104AQ8WTQ1 72 aa0.95□□□□□ -2.26
XRN1-207ENST00000468894 TRIOO75962 3097 aa0.95□□□□□ -2.26
XRN1-207ENST00000468894 DCHS2Q6V1P9 2916 aa0.95□□□□□ -2.26
XRN1-207ENST00000468894 WNK1Q9H4A3 2382 aa0.94□□□□□ -2.26
XRN1-207ENST00000468894 DEFB106AQ8N104 65 aa0.94□□□□□ -2.26
XRN1-207ENST00000468894 DSTQ03001 7570 aaKnown RBP0.93□□□□□ -2.26
XRN1-207ENST00000468894 NBASA2RRP1 2371 aa0.93□□□□□ -2.26
XRN1-207ENST00000468894 M0QY20 66 aa0.93□□□□□ -2.26
XRN1-207ENST00000468894 VPS13BQ7Z7G8 4022 aa0.92□□□□□ -2.26
XRN1-207ENST00000468894 PRCDQ00LT1 54 aa0.92□□□□□ -2.26
XRN1-207ENST00000468894 DEFB109BQ30KR1 87 aa0.92□□□□□ -2.26
XRN1-207ENST00000468894 ZNF469Q96JG9 3925 aaPredicted RBP0.92□□□□□ -2.26
XRN1-207ENST00000468894 MAP1AP78559 2803 aaPredicted RBP0.92□□□□□ -2.26
XRN1-207ENST00000468894 DNAH11Q96DT5 4516 aa0.91□□□□□ -2.26
XRN1-207ENST00000468894 KMT2DO14686 5537 aa0.91□□□□□ -2.26
XRN1-207ENST00000468894 SPINK1P00995 79 aa0.91□□□□□ -2.26
XRN1-207ENST00000468894 TOMM7Q9P0U1 55 aa0.91□□□□□ -2.26
XRN1-207ENST00000468894 VPS13DQ5THJ4 4388 aa0.91□□□□□ -2.26
XRN1-207ENST00000468894 VPS13CQ709C8 3753 aa0.91□□□□□ -2.26
XRN1-207ENST00000468894 FAT2Q9NYQ8 4349 aa0.91□□□□□ -2.26
XRN1-207ENST00000468894 CENPEQ02224 2701 aa0.89□□□□□ -2.27
XRN1-207ENST00000468894 HMCN2Q8NDA2 5059 aa0.89□□□□□ -2.27
XRN1-207ENST00000468894 ACANP16112 2415 aa0.89□□□□□ -2.27
XRN1-207ENST00000468894 KMT2AQ03164 3969 aa0.89□□□□□ -2.27
XRN1-207ENST00000468894 LAMA5O15230 3695 aa0.88□□□□□ -2.27
XRN1-207ENST00000468894 NOP10Q9NPE3 64 aaKnown RBP0.88□□□□□ -2.27
XRN1-207ENST00000468894 FRAS1Q86XX4 4008 aa0.88□□□□□ -2.27
XRN1-207ENST00000468894 SACSQ9NZJ4 4579 aa0.86□□□□□ -2.27
XRN1-207ENST00000468894 MUC5ACP98088 5654 aa0.85□□□□□ -2.27
XRN1-207ENST00000468894 LAMA1P25391 3075 aa0.84□□□□□ -2.27
XRN1-207ENST00000468894 DNAH7Q8WXX0 4024 aa0.83□□□□□ -2.28
XRN1-207ENST00000468894 AKAP9Q99996 3911 aa0.82□□□□□ -2.28
XRN1-207ENST00000468894 K7EIM0 57 aa0.82□□□□□ -2.28
XRN1-207ENST00000468894 HECTD4Q9Y4D8 3996 aa0.82□□□□□ -2.28
XRN1-207ENST00000468894 APC2O95996 2303 aa0.82□□□□□ -2.28
XRN1-207ENST00000468894 TACC2O95359 2948 aa0.82□□□□□ -2.28
XRN1-207ENST00000468894 MDN1Q9NU22 5596 aa0.81□□□□□ -2.28
XRN1-207ENST00000468894 KRTAP2-3P0C7H8 128 aa0.81□□□□□ -2.28
XRN1-207ENST00000468894 TMEM167AQ8TBQ9 72 aa0.81□□□□□ -2.28
XRN1-207ENST00000468894 KRTAP2-4Q9BYR9 128 aa0.81□□□□□ -2.28
XRN1-207ENST00000468894 DNAH3Q8TD57 4116 aa0.81□□□□□ -2.28
XRN1-207ENST00000468894 DNAH8Q96JB1 4490 aa0.81□□□□□ -2.28
XRN1-207ENST00000468894 TNXBP22105 4242 aa0.81□□□□□ -2.28
XRN1-207ENST00000468894 MYCBP2O75592 4640 aa0.8□□□□□ -2.28
XRN1-207ENST00000468894 RPL39P5Q59GN2 51 aa0.8□□□□□ -2.28
XRN1-207ENST00000468894 PKHD1L1Q86WI1 4243 aa0.8□□□□□ -2.28
XRN1-207ENST00000468894 DYNC2H1Q8NCM8 4307 aaKnown RBP0.8□□□□□ -2.28
XRN1-207ENST00000468894 SPINK6Q6UWN8 80 aa0.79□□□□□ -2.28
XRN1-207ENST00000468894 H0YGG7 62 aa0.78□□□□□ -2.28
XRN1-207ENST00000468894 DEFB135Q30KP9 77 aa0.78□□□□□ -2.28
XRN1-207ENST00000468894 SMR3AQ99954 134 aa0.78□□□□□ -2.28
XRN1-207ENST00000468894 DEFB108AA8MXU0 73 aa0.77□□□□□ -2.29
XRN1-207ENST00000468894 MUC12Q9UKN1 5478 aa0.76□□□□□ -2.29
XRN1-207ENST00000468894 FLGP20930 4061 aaPredicted RBP0.76□□□□□ -2.29
XRN1-207ENST00000468894 M0QZ58 72 aa0.76□□□□□ -2.29
XRN1-207ENST00000468894 USH2AO75445 5202 aa0.76□□□□□ -2.29
XRN1-207ENST00000468894 DNAH2Q9P225 4427 aa0.76□□□□□ -2.29
XRN1-207ENST00000468894 M0R2T5 61 aa0.75□□□□□ -2.29
XRN1-207ENST00000468894 KRTAP2-1Q9BYU5 128 aa0.75□□□□□ -2.29
XRN1-207ENST00000468894 HUWE1Q7Z6Z7 4374 aaKnown RBP0.75□□□□□ -2.29
XRN1-207ENST00000468894 PKD1P98161 4303 aa0.75□□□□□ -2.29
XRN1-207ENST00000468894 HSPG2P98160 4391 aa0.74□□□□□ -2.29
XRN1-207ENST00000468894 ANK3Q12955 4377 aaKnown RBP0.74□□□□□ -2.29
XRN1-207ENST00000468894 DNAH6Q9C0G6 4158 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms