RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 COX6CP09669 75 aa4.26□□□□□ -1.73
NEDD9-207ENST00000468612 FXYD2P54710 66 aa4.26□□□□□ -1.73
NEDD9-207ENST00000468612 CXCL6P80162 114 aa4.26□□□□□ -1.73
NEDD9-207ENST00000468612 LOC110117498A0A087WWA1 95 aa4.25□□□□□ -1.73
NEDD9-207ENST00000468612 KRTAP19-3Q7Z4W3 81 aa4.24□□□□□ -1.73
NEDD9-207ENST00000468612 BAALC-AS2P0C853 105 aa4.23□□□□□ -1.73
NEDD9-207ENST00000468612 C14orf144Q96I85 54 aa4.23□□□□□ -1.73
NEDD9-207ENST00000468612 HIST1H2BLQ99880 126 aa4.23□□□□□ -1.73
NEDD9-207ENST00000468612 S100A2P29034 98 aa4.22□□□□□ -1.73
NEDD9-207ENST00000468612 CASC2Q6XLA1 102 aa4.22□□□□□ -1.73
NEDD9-207ENST00000468612 ADM2Q7Z4H4 148 aa4.22□□□□□ -1.73
NEDD9-207ENST00000468612 K7ERJ3 54 aa4.19□□□□□ -1.74
NEDD9-207ENST00000468612 KRTAP5-4Q6L8H1 288 aa4.19□□□□□ -1.74
NEDD9-207ENST00000468612 CYSTM1Q9H1C7 97 aa4.19□□□□□ -1.74
NEDD9-207ENST00000468612 JMJD7-PLA2G4BH0Y9G9 81 aa4.18□□□□□ -1.74
NEDD9-207ENST00000468612 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
NEDD9-207ENST00000468612 LOC105371267A0A1B0GV96 52 aa4.16□□□□□ -1.74
NEDD9-207ENST00000468612 MT1EP04732 61 aa4.16□□□□□ -1.74
NEDD9-207ENST00000468612 PAM16Q9Y3D7 125 aa4.16□□□□□ -1.74
NEDD9-207ENST00000468612 R4GN34 69 aa4.16□□□□□ -1.74
NEDD9-207ENST00000468612 NDUFC1O43677 76 aa4.15□□□□□ -1.75
NEDD9-207ENST00000468612 C14orf132Q9NPU4 83 aa4.15□□□□□ -1.75
NEDD9-207ENST00000468612 Q8N9L7 120 aa4.14□□□□□ -1.75
NEDD9-207ENST00000468612 BPY2O14599 106 aa4.13□□□□□ -1.75
NEDD9-207ENST00000468612 SCGB1C2P0DMR2 95 aa4.12□□□□□ -1.75
NEDD9-207ENST00000468612 SMIM6P0DI80 62 aa4.11□□□□□ -1.75
NEDD9-207ENST00000468612 SPATA45Q537H7 98 aa4.11□□□□□ -1.75
NEDD9-207ENST00000468612 M0QZ58 72 aa4.1□□□□□ -1.75
NEDD9-207ENST00000468612 P0C880 135 aa4.07□□□□□ -1.76
NEDD9-207ENST00000468612 LINC01554Q52M75 96 aa4.07□□□□□ -1.76
NEDD9-207ENST00000468612 PYY3Q5JQD4 70 aa4.07□□□□□ -1.76
NEDD9-207ENST00000468612 MT1GP13640 62 aa4.06□□□□□ -1.76
NEDD9-207ENST00000468612 VAMP8Q9BV40 100 aa4.06□□□□□ -1.76
NEDD9-207ENST00000468612 HSD52Q0P140 79 aa4.05□□□□□ -1.76
NEDD9-207ENST00000468612 CYP4F30PQ9H0H9 118 aa4.05□□□□□ -1.76
NEDD9-207ENST00000468612 ATXN8Q156A1 80 aa4.04□□□□□ -1.76
NEDD9-207ENST00000468612 TSTD3H0UI37 97 aa4.03□□□□□ -1.76
NEDD9-207ENST00000468612 AHNAKQ09666 5890 aaKnown RBP4.03□□□□□ -1.76
NEDD9-207ENST00000468612 K7EP34 96 aa4.01□□□□□ -1.77
NEDD9-207ENST00000468612 PP632Q6XCG6 107 aa4.01□□□□□ -1.77
NEDD9-207ENST00000468612 C20orf197Q8N268 126 aa4□□□□□ -1.77
NEDD9-207ENST00000468612 MT1MQ8N339 61 aa4□□□□□ -1.77
NEDD9-207ENST00000468612 PCP4L1A6NKN8 68 aa3.99□□□□□ -1.77
NEDD9-207ENST00000468612 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
NEDD9-207ENST00000468612 TP53AIP1Q9HCN2 124 aa3.99□□□□□ -1.77
NEDD9-207ENST00000468612 UQCR10Q9UDW1 63 aa3.99□□□□□ -1.77
NEDD9-207ENST00000468612 NAA38Q9BRA0 125 aaKnown RBP3.97□□□□□ -1.77
NEDD9-207ENST00000468612 M0R143 59 aa3.93□□□□□ -1.78
NEDD9-207ENST00000468612 KRTAP4-3Q9BYR4 195 aa3.93□□□□□ -1.78
NEDD9-207ENST00000468612 MUC5BQ9HC84 5762 aaPredicted RBP3.93□□□□□ -1.78
NEDD9-207ENST00000468612 MUC5ACP98088 5654 aa3.92□□□□□ -1.78
NEDD9-207ENST00000468612 ACYP1P07311 99 aa3.91□□□□□ -1.78
NEDD9-207ENST00000468612 LOC101927531A0A1B0GV80 90 aa3.9□□□□□ -1.79
NEDD9-207ENST00000468612 BATFQ16520 125 aa3.9□□□□□ -1.79
NEDD9-207ENST00000468612 TRAV22A0A0B4J277 110 aa3.89□□□□□ -1.79
NEDD9-207ENST00000468612 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
NEDD9-207ENST00000468612 COL5A1-AS1Q5SY13 56 aa3.87□□□□□ -1.79
NEDD9-207ENST00000468612 MT1LQ93083 61 aa3.87□□□□□ -1.79
NEDD9-207ENST00000468612 MT-ATP8P03928 68 aa3.84□□□□□ -1.79
NEDD9-207ENST00000468612 A0A1W2PPM0 123 aa3.81□□□□□ -1.8
NEDD9-207ENST00000468612 C9orf118A6NHY6 69 aa3.79□□□□□ -1.8
NEDD9-207ENST00000468612 H3BT86 120 aa3.79□□□□□ -1.8
NEDD9-207ENST00000468612 TAX1BP3O14907 124 aa3.79□□□□□ -1.8
NEDD9-207ENST00000468612 KRTAP4-11Q9BYQ6 195 aa3.79□□□□□ -1.8
NEDD9-207ENST00000468612 UBL5Q9BZL1 73 aa3.78□□□□□ -1.8
NEDD9-207ENST00000468612 GTF2H5Q6ZYL4 71 aa3.77□□□□□ -1.81
NEDD9-207ENST00000468612 A0A1B0GV90 55 aa3.76□□□□□ -1.81
NEDD9-207ENST00000468612 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
NEDD9-207ENST00000468612 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
NEDD9-207ENST00000468612 SPCS1Q9Y6A9 102 aa3.75□□□□□ -1.81
NEDD9-207ENST00000468612 A0A0D9SG42 100 aa3.74□□□□□ -1.81
NEDD9-207ENST00000468612 KRTAP5-5Q701N2 237 aaPredicted RBP3.74□□□□□ -1.81
NEDD9-207ENST00000468612 KRTAP5-8O75690 187 aa3.71□□□□□ -1.82
NEDD9-207ENST00000468612 CAMK2N1Q7Z7J9 78 aa3.71□□□□□ -1.82
NEDD9-207ENST00000468612 F8W1H4 67 aa3.69□□□□□ -1.82
NEDD9-207ENST00000468612 H0Y9P7 68 aa3.69□□□□□ -1.82
NEDD9-207ENST00000468612 ATOX1O00244 68 aa3.69□□□□□ -1.82
NEDD9-207ENST00000468612 KRTAP4-7Q9BYR0 210 aa3.69□□□□□ -1.82
NEDD9-207ENST00000468612 UQCRQO14949 82 aa3.65□□□□□ -1.83
NEDD9-207ENST00000468612 J3QR89 54 aa3.62□□□□□ -1.83
NEDD9-207ENST00000468612 PRO0461Q9UI25 63 aa3.62□□□□□ -1.83
NEDD9-207ENST00000468612 ETDBQ3ZM63 59 aa3.61□□□□□ -1.83
NEDD9-207ENST00000468612 K7ERU9 68 aa3.6□□□□□ -1.83
NEDD9-207ENST00000468612 KRTAP9-9Q9BYP9 154 aa3.6□□□□□ -1.83
NEDD9-207ENST00000468612 KRTAP9-4Q9BYQ2 154 aa3.6□□□□□ -1.83
NEDD9-207ENST00000468612 DMAC1Q96GE9 116 aa3.58□□□□□ -1.84
NEDD9-207ENST00000468612 KRTAP5-2Q701N4 177 aa3.57□□□□□ -1.84
NEDD9-207ENST00000468612 LINC00208Q96KT6 92 aa3.57□□□□□ -1.84
NEDD9-207ENST00000468612 KRTAP4-12Q9BQ66 201 aa3.57□□□□□ -1.84
NEDD9-207ENST00000468612 KRTAP13-4Q3LI77 160 aa3.56□□□□□ -1.84
NEDD9-207ENST00000468612 C10orf95Q9H7T3 257 aa3.56□□□□□ -1.84
NEDD9-207ENST00000468612 FAM240AA0A1B0GVK7 77 aa3.55□□□□□ -1.84
NEDD9-207ENST00000468612 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
NEDD9-207ENST00000468612 LCE3AQ5TA76 89 aa3.49□□□□□ -1.85
NEDD9-207ENST00000468612 ATP5EP2Q5VTU8 51 aa3.49□□□□□ -1.85
NEDD9-207ENST00000468612 TRAV7A0A075B6U4 112 aa3.47□□□□□ -1.85
NEDD9-207ENST00000468612 LINC00643Q86TS7 51 aa3.46□□□□□ -1.86
NEDD9-207ENST00000468612 MP68P56378 58 aa3.43□□□□□ -1.86
NEDD9-207ENST00000468612 SPTSSBQ8NFR3 76 aa3.42□□□□□ -1.86
NEDD9-207ENST00000468612 HIST1H4AP62805 103 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms