RNA–Protein interactions for RNA: ENST00000467911.1

NCK1-203, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-203ENST00000467911 MDN1Q9NU22 5596 aa0.45□□□□□ -2.34
NCK1-203ENST00000467911 C5orf42Q9H799 3197 aa0.45□□□□□ -2.34
NCK1-203ENST00000467911 UTP20O75691 2785 aaKnown RBP0.45□□□□□ -2.34
NCK1-203ENST00000467911 COL12A1Q99715 3063 aa0.44□□□□□ -2.34
NCK1-203ENST00000467911 FRYLO94915 3013 aa0.44□□□□□ -2.34
NCK1-203ENST00000467911 ZZEF1O43149 2961 aa0.44□□□□□ -2.34
NCK1-203ENST00000467911 SPTBN4Q9H254 2564 aa0.44□□□□□ -2.34
NCK1-203ENST00000467911 CSMD2Q7Z408 3487 aa0.44□□□□□ -2.34
NCK1-203ENST00000467911 NAV2Q8IVL1 2488 aa0.44□□□□□ -2.34
NCK1-203ENST00000467911 CCDC168Q8NDH2 2452 aa0.44□□□□□ -2.34
NCK1-203ENST00000467911 USP34Q70CQ2 3546 aa0.44□□□□□ -2.34
NCK1-203ENST00000467911 SETXQ7Z333 2677 aaKnown RBP0.43□□□□□ -2.34
NCK1-203ENST00000467911 CREBBPQ92793 2442 aa0.43□□□□□ -2.34
NCK1-203ENST00000467911 USP9YO00507 2555 aaPredicted RBP0.43□□□□□ -2.34
NCK1-203ENST00000467911 DNAH12Q6ZR08 3092 aa0.43□□□□□ -2.34
NCK1-203ENST00000467911 CHD8Q9HCK8 2581 aa0.43□□□□□ -2.34
NCK1-203ENST00000467911 HTTP42858 3142 aa0.42□□□□□ -2.34
NCK1-203ENST00000467911 XIRP2A4UGR9 3374 aa0.42□□□□□ -2.34
NCK1-203ENST00000467911 ATMQ13315 3056 aa0.42□□□□□ -2.34
NCK1-203ENST00000467911 PRUNE2Q8WUY3 3088 aa0.42□□□□□ -2.34
NCK1-203ENST00000467911 NBEAQ8NFP9 2946 aa0.42□□□□□ -2.34
NCK1-203ENST00000467911 HTN3P15516 51 aa0.42□□□□□ -2.34
NCK1-203ENST00000467911 LINC01556Q5JQF7 62 aa0.42□□□□□ -2.34
NCK1-203ENST00000467911 KRTAP8-1Q8IUC2 63 aa0.42□□□□□ -2.34
NCK1-203ENST00000467911 Q9Y3F1 56 aa0.42□□□□□ -2.34
NCK1-203ENST00000467911 MUC3AQ02505 3323 aa0.42□□□□□ -2.34
NCK1-203ENST00000467911 UNC79Q9P2D8 2635 aa0.42□□□□□ -2.34
NCK1-203ENST00000467911 DMXL2Q8TDJ6 3036 aa0.42□□□□□ -2.34
NCK1-203ENST00000467911 WDR87Q6ZQQ6 2873 aa0.42□□□□□ -2.34
NCK1-203ENST00000467911 APC2O95996 2303 aa0.42□□□□□ -2.34
NCK1-203ENST00000467911 NSD1Q96L73 2696 aaPredicted RBP0.41□□□□□ -2.34
NCK1-203ENST00000467911 ASPMQ8IZT6 3477 aa0.41□□□□□ -2.34
NCK1-203ENST00000467911 NBASA2RRP1 2371 aa0.41□□□□□ -2.34
NCK1-203ENST00000467911 UTRNP46939 3433 aa0.41□□□□□ -2.34
NCK1-203ENST00000467911 DCHS1Q96JQ0 3298 aa0.41□□□□□ -2.34
NCK1-203ENST00000467911 ACACAQ13085 2346 aa0.41□□□□□ -2.34
NCK1-203ENST00000467911 SETD2Q9BYW2 2564 aaPredicted RBP0.41□□□□□ -2.34
NCK1-203ENST00000467911 ANKRD11Q6UB99 2663 aaPredicted RBP0.41□□□□□ -2.34
NCK1-203ENST00000467911 NBEAL2Q6ZNJ1 2754 aa0.41□□□□□ -2.34
NCK1-203ENST00000467911 MUC5BQ9HC84 5762 aaPredicted RBP0.41□□□□□ -2.34
NCK1-203ENST00000467911 LRBAP50851 2863 aa0.41□□□□□ -2.34
NCK1-203ENST00000467911 MXRA5Q9NR99 2828 aa0.41□□□□□ -2.34
NCK1-203ENST00000467911 FAT4Q6V0I7 4981 aa0.4□□□□□ -2.35
NCK1-203ENST00000467911 ZANQ9Y493 2812 aa0.4□□□□□ -2.35
NCK1-203ENST00000467911 SMR3BP02814 79 aaPredicted RBP0.4□□□□□ -2.35
NCK1-203ENST00000467911 CD52P31358 61 aa0.4□□□□□ -2.35
NCK1-203ENST00000467911 ITPR1Q14643 2758 aa0.4□□□□□ -2.35
NCK1-203ENST00000467911 HIVEP3Q5T1R4 2406 aa0.4□□□□□ -2.35
NCK1-203ENST00000467911 MUC17Q685J3 4493 aa0.4□□□□□ -2.35
NCK1-203ENST00000467911 HIVEP1P15822 2718 aa0.4□□□□□ -2.35
NCK1-203ENST00000467911 STAB1Q9NY15 2570 aa0.4□□□□□ -2.35
NCK1-203ENST00000467911 MYO15AQ9UKN7 3530 aa0.39□□□□□ -2.35
NCK1-203ENST00000467911 ADGRG4Q8IZF6 3080 aa0.39□□□□□ -2.35
NCK1-203ENST00000467911 BOD1L1Q8NFC6 3051 aa0.39□□□□□ -2.35
NCK1-203ENST00000467911 NIPBLQ6KC79 2804 aaeCLIP0.39□□□□□ -2.35
NCK1-203ENST00000467911 MAP1BP46821 2468 aaKnown RBP0.39□□□□□ -2.35
NCK1-203ENST00000467911 CEP350Q5VT06 3117 aa0.39□□□□□ -2.35
NCK1-203ENST00000467911 SRCAPQ6ZRS2 3230 aa0.39□□□□□ -2.35
NCK1-203ENST00000467911 LRP1BQ9NZR2 4599 aa0.38□□□□□ -2.35
NCK1-203ENST00000467911 MTORP42345 2549 aa0.38□□□□□ -2.35
NCK1-203ENST00000467911 FLNBO75369 2602 aaKnown RBP0.38□□□□□ -2.35
NCK1-203ENST00000467911 HRNRQ86YZ3 2850 aaPredicted RBP0.38□□□□□ -2.35
NCK1-203ENST00000467911 ACANP16112 2415 aa0.37□□□□□ -2.35
NCK1-203ENST00000467911 SPRR2DP22532 72 aa0.37□□□□□ -2.35
NCK1-203ENST00000467911 KRTAP6-2Q3LI66 62 aa0.37□□□□□ -2.35
NCK1-203ENST00000467911 NCOR2Q9Y618 2525 aa0.37□□□□□ -2.35
NCK1-203ENST00000467911 EPG5Q9HCE0 2579 aa0.37□□□□□ -2.35
NCK1-203ENST00000467911 RIF1Q5UIP0 2472 aaKnown RBP0.37□□□□□ -2.35
NCK1-203ENST00000467911 TEP1Q99973 2627 aaKnown RBP0.36□□□□□ -2.35
NCK1-203ENST00000467911 CACNA1AO00555 2505 aa0.36□□□□□ -2.35
NCK1-203ENST00000467911 LRRK2Q5S007 2527 aa0.36□□□□□ -2.35
NCK1-203ENST00000467911 ZFYVE26Q68DK2 2539 aa0.36□□□□□ -2.35
NCK1-203ENST00000467911 PTPN13Q12923 2485 aa0.36□□□□□ -2.35
NCK1-203ENST00000467911 DEFB4AO15263 64 aa0.36□□□□□ -2.35
NCK1-203ENST00000467911 MT1AP04731 61 aa0.36□□□□□ -2.35
NCK1-203ENST00000467911 RPS29P62273 56 aaKnown RBP0.36□□□□□ -2.35
NCK1-203ENST00000467911 HERC1Q15751 4861 aa0.36□□□□□ -2.35
NCK1-203ENST00000467911 SPEGQ15772 3267 aa0.36□□□□□ -2.35
NCK1-203ENST00000467911 LAMA1P25391 3075 aa0.36□□□□□ -2.35
NCK1-203ENST00000467911 MAP1AP78559 2803 aaPredicted RBP0.36□□□□□ -2.35
NCK1-203ENST00000467911 AHNAKQ09666 5890 aaKnown RBP0.35□□□□□ -2.35
NCK1-203ENST00000467911 FREM2Q5SZK8 3169 aa0.35□□□□□ -2.35
NCK1-203ENST00000467911 WDFY3Q8IZQ1 3526 aa0.35□□□□□ -2.35
NCK1-203ENST00000467911 STARD9Q9P2P6 4700 aa0.35□□□□□ -2.35
NCK1-203ENST00000467911 SPRR2BP35325 72 aa0.35□□□□□ -2.35
NCK1-203ENST00000467911 LAMA3Q16787 3333 aa0.35□□□□□ -2.35
NCK1-203ENST00000467911 WDFY4Q6ZS81 3184 aa0.35□□□□□ -2.35
NCK1-203ENST00000467911 ACACBO00763 2458 aa0.35□□□□□ -2.35
NCK1-203ENST00000467911 LOC400499M0QZD8 3231 aa0.34□□□□□ -2.35
NCK1-203ENST00000467911 FAM186AA6NE01 2351 aa0.34□□□□□ -2.35
NCK1-203ENST00000467911 ANKHD1Q8IWZ3 2542 aaKnown RBP0.34□□□□□ -2.35
NCK1-203ENST00000467911 BRCA2P51587 3418 aa0.34□□□□□ -2.35
NCK1-203ENST00000467911 SONP18583 2426 aaKnown RBP0.34□□□□□ -2.35
NCK1-203ENST00000467911 KRTAP19-5Q3LI72 72 aa0.34□□□□□ -2.36
NCK1-203ENST00000467911 FASNP49327 2511 aaKnown RBP0.34□□□□□ -2.36
NCK1-203ENST00000467911 ITPR2Q14571 2701 aa0.34□□□□□ -2.36
NCK1-203ENST00000467911 LRP2P98164 4655 aa0.34□□□□□ -2.36
NCK1-203ENST00000467911 TGP01266 2768 aa0.34□□□□□ -2.36
NCK1-203ENST00000467911 GPR98Q8WXG9 6306 aa0.33□□□□□ -2.36
NCK1-203ENST00000467911 USP9XQ93008 2570 aaPredicted RBP0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms