RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 RALGAPBQ86X10 1494 aa-0.86□□□□□ -2.55
VPS13A-209ENST00000467124 LY75O60449 1722 aa-0.86□□□□□ -2.55
VPS13A-209ENST00000467124 FRYLO94915 3013 aa-0.86□□□□□ -2.55
VPS13A-209ENST00000467124 PARP4Q9UKK3 1724 aaKnown RBP-0.86□□□□□ -2.55
VPS13A-209ENST00000467124 TOGARAM1Q9Y4F4 1720 aa-0.86□□□□□ -2.55
VPS13A-209ENST00000467124 TNP1P09430 55 aa-0.87□□□□□ -2.55
VPS13A-209ENST00000467124 MUC3AQ02505 3323 aa-0.87□□□□□ -2.55
VPS13A-209ENST00000467124 SZT2Q5T011 3432 aa-0.87□□□□□ -2.55
VPS13A-209ENST00000467124 EP400Q96L91 3159 aa-0.87□□□□□ -2.55
VPS13A-209ENST00000467124 MAST1Q9Y2H9 1570 aa-0.87□□□□□ -2.55
VPS13A-209ENST00000467124 ANKARQ7Z5J8 1434 aa-0.88□□□□□ -2.55
VPS13A-209ENST00000467124 A8MTW9 85 aa-0.88□□□□□ -2.55
VPS13A-209ENST00000467124 MMP24-AS1A0A0U1RRL7 71 aa-0.89□□□□□ -2.55
VPS13A-209ENST00000467124 HILPDAQ9Y5L2 63 aa-0.89□□□□□ -2.55
VPS13A-209ENST00000467124 A0A1B0GUL6 1792 aa-0.89□□□□□ -2.55
VPS13A-209ENST00000467124 CENPEQ02224 2701 aa-0.9□□□□□ -2.55
VPS13A-209ENST00000467124 IGLV5-48A0A075B6I7 105 aa-0.9□□□□□ -2.55
VPS13A-209ENST00000467124 RPS29P62273 56 aaKnown RBP-0.9□□□□□ -2.55
VPS13A-209ENST00000467124 ITSN2Q9NZM3 1697 aa-0.91□□□□□ -2.55
VPS13A-209ENST00000467124 CFAP47Q6ZTR5 3102 aa-0.91□□□□□ -2.56
VPS13A-209ENST00000467124 ABCA8O94911 1581 aa-0.91□□□□□ -2.56
VPS13A-209ENST00000467124 DNAH14Q0VDD8 3507 aa-0.92□□□□□ -2.56
VPS13A-209ENST00000467124 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.92□□□□□ -2.56
VPS13A-209ENST00000467124 ETDCA0A1B0GVM5 59 aa-0.92□□□□□ -2.56
VPS13A-209ENST00000467124 LINC01546A6NGU7 62 aa-0.92□□□□□ -2.56
VPS13A-209ENST00000467124 NCBP2-AS2Q69YL0 99 aa-0.92□□□□□ -2.56
VPS13A-209ENST00000467124 KIF21BO75037 1637 aa-0.93□□□□□ -2.56
VPS13A-209ENST00000467124 KIF1AQ12756 1690 aa-0.93□□□□□ -2.56
VPS13A-209ENST00000467124 DNAH12Q6ZR08 3092 aa-0.93□□□□□ -2.56
VPS13A-209ENST00000467124 M0QZ58 72 aa-0.93□□□□□ -2.56
VPS13A-209ENST00000467124 MKI67P46013 3256 aaKnown RBP-0.93□□□□□ -2.56
VPS13A-209ENST00000467124 CROCC2H7BZ55 1655 aa-0.94□□□□□ -2.56
VPS13A-209ENST00000467124 ZC3H13Q5T200 1668 aaKnown RBP-0.94□□□□□ -2.56
VPS13A-209ENST00000467124 KIAA0586Q9BVV6 1533 aa-0.94□□□□□ -2.56
VPS13A-209ENST00000467124 DIP2AQ14689 1571 aa-0.94□□□□□ -2.56
VPS13A-209ENST00000467124 DEFB136Q30KP8 78 aa-0.94□□□□□ -2.56
VPS13A-209ENST00000467124 MINOS1Q5TGZ0 78 aa-0.94□□□□□ -2.56
VPS13A-209ENST00000467124 UNC80Q8N2C7 3258 aa-0.94□□□□□ -2.56
VPS13A-209ENST00000467124 NRAPQ86VF7 1730 aa-0.95□□□□□ -2.56
VPS13A-209ENST00000467124 SPART-AS1P0CW21 52 aa-0.95□□□□□ -2.56
VPS13A-209ENST00000467124 RPS27P42677 84 aaKnown RBP-0.95□□□□□ -2.56
VPS13A-209ENST00000467124 WT1-ASQ06250 92 aa-0.95□□□□□ -2.56
VPS13A-209ENST00000467124 RPS27LQ71UM5 84 aaKnown RBP-0.95□□□□□ -2.56
VPS13A-209ENST00000467124 LEAP2Q969E1 77 aa-0.95□□□□□ -2.56
VPS13A-209ENST00000467124 LRRIQ1Q96JM4 1722 aa-0.95□□□□□ -2.56
VPS13A-209ENST00000467124 DNMBPQ6XZF7 1577 aa-0.96□□□□□ -2.56
VPS13A-209ENST00000467124 RNF17Q9BXT8 1623 aaKnown RBP-0.96□□□□□ -2.56
VPS13A-209ENST00000467124 SFTA3P0C7M3 94 aa-0.96□□□□□ -2.56
VPS13A-209ENST00000467124 KRTAP19-2Q3LHN2 52 aa-0.96□□□□□ -2.56
VPS13A-209ENST00000467124 ASXL1Q8IXJ9 1541 aa-0.96□□□□□ -2.56
VPS13A-209ENST00000467124 THOC2Q8NI27 1593 aaKnown RBP-0.96□□□□□ -2.56
VPS13A-209ENST00000467124 ATXN8Q156A1 80 aa-0.97□□□□□ -2.56
VPS13A-209ENST00000467124 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.97□□□□□ -2.56
VPS13A-209ENST00000467124 MYO5CQ9NQX4 1742 aa-0.98□□□□□ -2.57
VPS13A-209ENST00000467124 ASPMQ8IZT6 3477 aa-0.98□□□□□ -2.57
VPS13A-209ENST00000467124 GNG13Q9P2W3 67 aa-0.98□□□□□ -2.57
VPS13A-209ENST00000467124 USP34Q70CQ2 3546 aa-0.98□□□□□ -2.57
VPS13A-209ENST00000467124 VCANP13611 3396 aa-0.99□□□□□ -2.57
VPS13A-209ENST00000467124 IQGAP3Q86VI3 1631 aa-1□□□□□ -2.57
VPS13A-209ENST00000467124 M0QY20 66 aa-1□□□□□ -2.57
VPS13A-209ENST00000467124 LOC400499M0QZD8 3231 aa-1□□□□□ -2.57
VPS13A-209ENST00000467124 FAM208AQ9UK61 1670 aaKnown RBP-1□□□□□ -2.57
VPS13A-209ENST00000467124 NHSQ6T4R5 1651 aa-1.01□□□□□ -2.57
VPS13A-209ENST00000467124 XIRP2A4UGR9 3374 aa-1.02□□□□□ -2.57
VPS13A-209ENST00000467124 FCER1GP30273 86 aa-1.02□□□□□ -2.57
VPS13A-209ENST00000467124 CLASP1Q7Z460 1538 aa-1.02□□□□□ -2.57
VPS13A-209ENST00000467124 TTTY10Q9BZA0 68 aa-1.02□□□□□ -2.57
VPS13A-209ENST00000467124 NOP10Q9NPE3 64 aaKnown RBP-1.02□□□□□ -2.57
VPS13A-209ENST00000467124 BRCA2P51587 3418 aa-1.03□□□□□ -2.57
VPS13A-209ENST00000467124 UGGT2Q9NYU1 1516 aa-1.03□□□□□ -2.57
VPS13A-209ENST00000467124 NRXN3Q9Y4C0 1643 aa-1.04□□□□□ -2.58
VPS13A-209ENST00000467124 INO80Q9ULG1 1556 aaPredicted RBP-1.04□□□□□ -2.58
VPS13A-209ENST00000467124 SMCO4Q9NRQ5 59 aa-1.04□□□□□ -2.58
VPS13A-209ENST00000467124 KAAG1Q9UBP8 84 aa-1.04□□□□□ -2.58
VPS13A-209ENST00000467124 CDH23Q9H251 3354 aa-1.04□□□□□ -2.58
VPS13A-209ENST00000467124 LMO7Q8WWI1 1683 aa-1.04□□□□□ -2.58
VPS13A-209ENST00000467124 C6orf48Q9UBA6 75 aa-1.05□□□□□ -2.58
VPS13A-209ENST00000467124 CENPFP49454 3210 aa-1.06□□□□□ -2.58
VPS13A-209ENST00000467124 CEP250Q9BV73 2442 aa-1.06□□□□□ -2.58
VPS13A-209ENST00000467124 PREX2Q70Z35 1606 aa-1.06□□□□□ -2.58
VPS13A-209ENST00000467124 H3BUA1 57 aa-1.06□□□□□ -2.58
VPS13A-209ENST00000467124 POLR2KP53803 58 aaKnown RBP-1.06□□□□□ -2.58
VPS13A-209ENST00000467124 ABCC6O95255 1503 aa-1.06□□□□□ -2.58
VPS13A-209ENST00000467124 EEA1Q15075 1411 aa-1.06□□□□□ -2.58
VPS13A-209ENST00000467124 DUOX2Q9NRD8 1548 aa-1.07□□□□□ -2.58
VPS13A-209ENST00000467124 VPS13AQ96RL7 3174 aa-1.08□□□□□ -2.58
VPS13A-209ENST00000467124 PDCD5O14737 125 aa-1.09□□□□□ -2.58
VPS13A-209ENST00000467124 ABCA9Q8IUA7 1624 aa-1.09□□□□□ -2.58
VPS13A-209ENST00000467124 GLI2P10070 1586 aa-1.09□□□□□ -2.58
VPS13A-209ENST00000467124 SCRIBQ14160 1630 aa-1.1□□□□□ -2.59
VPS13A-209ENST00000467124 CCDC180Q9P1Z9 1646 aa-1.1□□□□□ -2.59
VPS13A-209ENST00000467124 WFDC10BQ8IUB3 73 aa-1.1□□□□□ -2.59
VPS13A-209ENST00000467124 DEFB114Q30KQ6 69 aa-1.11□□□□□ -2.59
VPS13A-209ENST00000467124 C3P01024 1663 aa-1.11□□□□□ -2.59
VPS13A-209ENST00000467124 MROH1Q8NDA8 1641 aa-1.12□□□□□ -2.59
VPS13A-209ENST00000467124 ALS2Q96Q42 1657 aa-1.13□□□□□ -2.59
VPS13A-209ENST00000467124 K7EMI3 77 aa-1.13□□□□□ -2.59
VPS13A-209ENST00000467124 UTRNP46939 3433 aa-1.13□□□□□ -2.59
VPS13A-209ENST00000467124 TIAM1Q13009 1591 aa-1.13□□□□□ -2.59
VPS13A-209ENST00000467124 LINC01549A6NIU2 74 aa-1.14□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms