RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 DNAH7Q8WXX0 4024 aa-0.71□□□□□ -2.52
PRPF40A-205ENST00000467114 IGIPA6NJ69 53 aa-0.71□□□□□ -2.52
PRPF40A-205ENST00000467114 CELSR3Q9NYQ7 3312 aa-0.71□□□□□ -2.52
PRPF40A-205ENST00000467114 CCDC180Q9P1Z9 1646 aa-0.71□□□□□ -2.52
PRPF40A-205ENST00000467114 M0QY20 66 aa-0.72□□□□□ -2.52
PRPF40A-205ENST00000467114 KRTAP8-1Q8IUC2 63 aa-0.72□□□□□ -2.52
PRPF40A-205ENST00000467114 ABRACLQ9P1F3 81 aa-0.72□□□□□ -2.52
PRPF40A-205ENST00000467114 LAMA3Q16787 3333 aa-0.72□□□□□ -2.52
PRPF40A-205ENST00000467114 SERF2P84101 59 aa-0.73□□□□□ -2.53
PRPF40A-205ENST00000467114 TMEM167BQ9NRX6 74 aa-0.73□□□□□ -2.53
PRPF40A-205ENST00000467114 S100ZQ8WXG8 99 aa-0.74□□□□□ -2.53
PRPF40A-205ENST00000467114 ITPR1Q14643 2758 aa-0.74□□□□□ -2.53
PRPF40A-205ENST00000467114 UGGT1Q9NYU2 1555 aa-0.74□□□□□ -2.53
PRPF40A-205ENST00000467114 DNHD1Q96M86 4753 aa-0.75□□□□□ -2.53
PRPF40A-205ENST00000467114 SMIM27A0A1W2PRY6 76 aa-0.75□□□□□ -2.53
PRPF40A-205ENST00000467114 ALS2Q96Q42 1657 aa-0.75□□□□□ -2.53
PRPF40A-205ENST00000467114 A0A1B0GUL6 1792 aa-0.75□□□□□ -2.53
PRPF40A-205ENST00000467114 LAMA2P24043 3122 aaKnown RBP-0.76□□□□□ -2.53
PRPF40A-205ENST00000467114 WFDC10BQ8IUB3 73 aa-0.76□□□□□ -2.53
PRPF40A-205ENST00000467114 CPS1P31327 1500 aa-0.76□□□□□ -2.53
PRPF40A-205ENST00000467114 EFCAB6Q5THR3 1501 aa-0.76□□□□□ -2.53
PRPF40A-205ENST00000467114 DYNC1H1Q14204 4646 aaKnown RBP-0.77□□□□□ -2.53
PRPF40A-205ENST00000467114 M0QZ58 72 aa-0.77□□□□□ -2.53
PRPF40A-205ENST00000467114 SRCAPQ6ZRS2 3230 aa-0.77□□□□□ -2.53
PRPF40A-205ENST00000467114 ADGRG4Q8IZF6 3080 aa-0.78□□□□□ -2.53
PRPF40A-205ENST00000467114 NIPBLQ6KC79 2804 aaeCLIP-0.78□□□□□ -2.53
PRPF40A-205ENST00000467114 HYDINQ4G0P3 5121 aa-0.79□□□□□ -2.54
PRPF40A-205ENST00000467114 DOPEY1Q5JWR5 2465 aa-0.79□□□□□ -2.54
PRPF40A-205ENST00000467114 RNF213Q63HN8 5207 aa-0.79□□□□□ -2.54
PRPF40A-205ENST00000467114 FAM208AQ9UK61 1670 aaKnown RBP-0.79□□□□□ -2.54
PRPF40A-205ENST00000467114 COL6A5A8TX70 2615 aa-0.79□□□□□ -2.54
PRPF40A-205ENST00000467114 SPTAN1Q13813 2472 aaKnown RBP-0.79□□□□□ -2.54
PRPF40A-205ENST00000467114 ABCA10Q8WWZ4 1543 aa-0.79□□□□□ -2.54
PRPF40A-205ENST00000467114 DNAH17Q9UFH2 4485 aa-0.79□□□□□ -2.54
PRPF40A-205ENST00000467114 A8MTW9 85 aa-0.8□□□□□ -2.54
PRPF40A-205ENST00000467114 MGAQ8IWI9 3026 aa-0.81□□□□□ -2.54
PRPF40A-205ENST00000467114 H0YGX0 51 aa-0.81□□□□□ -2.54
PRPF40A-205ENST00000467114 SMIM5Q71RC9 77 aa-0.81□□□□□ -2.54
PRPF40A-205ENST00000467114 DNAH10Q8IVF4 4471 aa-0.81□□□□□ -2.54
PRPF40A-205ENST00000467114 MT1XP80297 61 aa-0.82□□□□□ -2.54
PRPF40A-205ENST00000467114 LRBAP50851 2863 aa-0.82□□□□□ -2.54
PRPF40A-205ENST00000467114 CHD7Q9P2D1 2997 aa-0.83□□□□□ -2.54
PRPF40A-205ENST00000467114 PRXQ9BXM0 1461 aa-0.83□□□□□ -2.54
PRPF40A-205ENST00000467114 SMIM31A0A1B0GVY4 71 aa-0.83□□□□□ -2.54
PRPF40A-205ENST00000467114 KIF21BO75037 1637 aa-0.83□□□□□ -2.54
PRPF40A-205ENST00000467114 PREX2Q70Z35 1606 aa-0.84□□□□□ -2.54
PRPF40A-205ENST00000467114 AGLP35573 1532 aa-0.84□□□□□ -2.54
PRPF40A-205ENST00000467114 CSMD1Q96PZ7 3565 aa-0.85□□□□□ -2.55
PRPF40A-205ENST00000467114 SPART-AS1P0CW21 52 aa-0.85□□□□□ -2.55
PRPF40A-205ENST00000467114 TFF3Q07654 80 aa-0.85□□□□□ -2.55
PRPF40A-205ENST00000467114 RYR2Q92736 4967 aa-0.86□□□□□ -2.55
PRPF40A-205ENST00000467114 LINC01546A6NGU7 62 aa-0.86□□□□□ -2.55
PRPF40A-205ENST00000467114 MT1EP04732 61 aa-0.86□□□□□ -2.55
PRPF40A-205ENST00000467114 TRRAPQ9Y4A5 3859 aa-0.86□□□□□ -2.55
PRPF40A-205ENST00000467114 MYO9AB2RTY4 2548 aa-0.86□□□□□ -2.55
PRPF40A-205ENST00000467114 LMO7Q8WWI1 1683 aa-0.88□□□□□ -2.55
PRPF40A-205ENST00000467114 NEBP20929 6669 aa-0.88□□□□□ -2.55
PRPF40A-205ENST00000467114 RYR3Q15413 4870 aa-0.89□□□□□ -2.55
PRPF40A-205ENST00000467114 PLNP26678 52 aa-0.89□□□□□ -2.55
PRPF40A-205ENST00000467114 KIAA1109Q2LD37 5005 aa-0.89□□□□□ -2.55
PRPF40A-205ENST00000467114 MT1LQ93083 61 aa-0.9□□□□□ -2.55
PRPF40A-205ENST00000467114 SYCP2Q9BX26 1530 aa-0.9□□□□□ -2.55
PRPF40A-205ENST00000467114 EYSQ5T1H1 3165 aa-0.9□□□□□ -2.55
PRPF40A-205ENST00000467114 CFAP46Q8IYW2 2715 aa-0.91□□□□□ -2.55
PRPF40A-205ENST00000467114 DNAH5Q8TE73 4624 aa-0.92□□□□□ -2.56
PRPF40A-205ENST00000467114 POLR2KP53803 58 aaKnown RBP-0.92□□□□□ -2.56
PRPF40A-205ENST00000467114 MROH2AA6NES4 1674 aa-0.93□□□□□ -2.56
PRPF40A-205ENST00000467114 DEFB131AP59861 70 aa-0.93□□□□□ -2.56
PRPF40A-205ENST00000467114 CEP295Q9C0D2 2601 aa-0.95□□□□□ -2.56
PRPF40A-205ENST00000467114 MT1GP13640 62 aa-0.96□□□□□ -2.56
PRPF40A-205ENST00000467114 SMIM2Q9BVW6 85 aa-0.96□□□□□ -2.56
PRPF40A-205ENST00000467114 CRYBG3Q68DQ2 2970 aa-0.97□□□□□ -2.57
PRPF40A-205ENST00000467114 ABCA5Q8WWZ7 1642 aa-0.97□□□□□ -2.57
PRPF40A-205ENST00000467114 ERICH3Q5RHP9 1530 aa-0.98□□□□□ -2.57
PRPF40A-205ENST00000467114 ADCY10Q96PN6 1610 aa-0.98□□□□□ -2.57
PRPF40A-205ENST00000467114 NRXN3Q9Y4C0 1643 aa-0.98□□□□□ -2.57
PRPF40A-205ENST00000467114 ZFHX4Q86UP3 3567 aa-0.98□□□□□ -2.57
PRPF40A-205ENST00000467114 IQGAP1P46940 1657 aa-0.99□□□□□ -2.57
PRPF40A-205ENST00000467114 CMC2Q9NRP2 79 aa-0.99□□□□□ -2.57
PRPF40A-205ENST00000467114 ABCC8Q09428 1581 aa-1□□□□□ -2.57
PRPF40A-205ENST00000467114 DDX60Q8IY21 1712 aaKnown RBP-1□□□□□ -2.57
PRPF40A-205ENST00000467114 MT1HL1P0DM35 61 aa-1□□□□□ -2.57
PRPF40A-205ENST00000467114 NFAT5O94916 1531 aa-1□□□□□ -2.57
PRPF40A-205ENST00000467114 LEAP2Q969E1 77 aa-1.01□□□□□ -2.57
PRPF40A-205ENST00000467114 DEFB4AO15263 64 aa-1.02□□□□□ -2.57
PRPF40A-205ENST00000467114 FANCD2Q9BXW9 1451 aa-1.03□□□□□ -2.57
PRPF40A-205ENST00000467114 SMG1Q96Q15 3661 aaKnown RBP-1.03□□□□□ -2.57
PRPF40A-205ENST00000467114 DMXL2Q8TDJ6 3036 aa-1.03□□□□□ -2.57
PRPF40A-205ENST00000467114 CSMD2Q7Z408 3487 aa-1.05□□□□□ -2.58
PRPF40A-205ENST00000467114 ITPR2Q14571 2701 aa-1.05□□□□□ -2.58
PRPF40A-205ENST00000467114 CFAP54Q96N23 3096 aa-1.07□□□□□ -2.58
PRPF40A-205ENST00000467114 MT1MQ8N339 61 aa-1.07□□□□□ -2.58
PRPF40A-205ENST00000467114 TRPM2O94759 1503 aa-1.07□□□□□ -2.58
PRPF40A-205ENST00000467114 PRUNE2Q8WUY3 3088 aa-1.08□□□□□ -2.58
PRPF40A-205ENST00000467114 MT2AP02795 61 aa-1.08□□□□□ -2.58
PRPF40A-205ENST00000467114 CLTCL1P53675 1640 aa-1.08□□□□□ -2.58
PRPF40A-205ENST00000467114 TLN1Q9Y490 2541 aaKnown RBP-1.09□□□□□ -2.58
PRPF40A-205ENST00000467114 NDUFA1O15239 70 aa-1.09□□□□□ -2.58
PRPF40A-205ENST00000467114 DEFB136Q30KP8 78 aa-1.11□□□□□ -2.59
PRPF40A-205ENST00000467114 ATMQ13315 3056 aa-1.12□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms