RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 ATXN8Q156A1 80 aa2.39□□□□□ -2.03
CXXC4-202ENST00000466963 HCG22E2RYF7 251 aa2.38□□□□□ -2.03
CXXC4-202ENST00000466963 TSTD3H0UI37 97 aa2.38□□□□□ -2.03
CXXC4-202ENST00000466963 C5orf47Q569G3 176 aa2.38□□□□□ -2.03
CXXC4-202ENST00000466963 NDUFS5O43920 106 aa2.38□□□□□ -2.03
CXXC4-202ENST00000466963 Q5W150 140 aa2.38□□□□□ -2.03
CXXC4-202ENST00000466963 DEFB116Q30KQ4 102 aa2.37□□□□□ -2.03
CXXC4-202ENST00000466963 KMT2DO14686 5537 aa2.37□□□□□ -2.03
CXXC4-202ENST00000466963 BAALC-AS2P0C853 105 aa2.37□□□□□ -2.03
CXXC4-202ENST00000466963 VPS25Q9BRG1 176 aa2.37□□□□□ -2.03
CXXC4-202ENST00000466963 MUC12Q9UKN1 5478 aa2.36□□□□□ -2.03
CXXC4-202ENST00000466963 C4orf26Q17RF5 130 aa2.36□□□□□ -2.03
CXXC4-202ENST00000466963 CASC2Q6XLA1 102 aa2.36□□□□□ -2.03
CXXC4-202ENST00000466963 NDUFC1O43677 76 aa2.35□□□□□ -2.03
CXXC4-202ENST00000466963 ATOH7Q8N100 152 aa2.35□□□□□ -2.03
CXXC4-202ENST00000466963 BPY2O14599 106 aa2.35□□□□□ -2.03
CXXC4-202ENST00000466963 S100A1P23297 94 aa2.35□□□□□ -2.03
CXXC4-202ENST00000466963 MT1XP80297 61 aa2.35□□□□□ -2.03
CXXC4-202ENST00000466963 KRTAP10-12P60413 245 aa2.34□□□□□ -2.03
CXXC4-202ENST00000466963 LOC101927531A0A1B0GV80 90 aa2.33□□□□□ -2.04
CXXC4-202ENST00000466963 SCGB1C2P0DMR2 95 aa2.33□□□□□ -2.04
CXXC4-202ENST00000466963 SVIPQ8NHG7 77 aa2.32□□□□□ -2.04
CXXC4-202ENST00000466963 S100A6P06703 90 aa2.32□□□□□ -2.04
CXXC4-202ENST00000466963 H3BT86 120 aa2.31□□□□□ -2.04
CXXC4-202ENST00000466963 SPATA45Q537H7 98 aa2.31□□□□□ -2.04
CXXC4-202ENST00000466963 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
CXXC4-202ENST00000466963 ATOX1O00244 68 aa2.3□□□□□ -2.04
CXXC4-202ENST00000466963 TRAV22A0A0B4J277 110 aa2.29□□□□□ -2.04
CXXC4-202ENST00000466963 FXYD2P54710 66 aa2.29□□□□□ -2.04
CXXC4-202ENST00000466963 ACYP1P07311 99 aa2.28□□□□□ -2.04
CXXC4-202ENST00000466963 M0R143 59 aa2.27□□□□□ -2.05
CXXC4-202ENST00000466963 UQCR10Q9UDW1 63 aa2.26□□□□□ -2.05
CXXC4-202ENST00000466963 R4GN34 69 aa2.26□□□□□ -2.05
CXXC4-202ENST00000466963 PP632Q6XCG6 107 aa2.26□□□□□ -2.05
CXXC4-202ENST00000466963 CYP4F30PQ9H0H9 118 aa2.26□□□□□ -2.05
CXXC4-202ENST00000466963 UBL5Q9BZL1 73 aa2.25□□□□□ -2.05
CXXC4-202ENST00000466963 KRTAP5-10Q6L8G5 202 aa2.25□□□□□ -2.05
CXXC4-202ENST00000466963 C14orf144Q96I85 54 aa2.24□□□□□ -2.05
CXXC4-202ENST00000466963 UQCRQO14949 82 aa2.22□□□□□ -2.05
CXXC4-202ENST00000466963 ADM2Q7Z4H4 148 aa2.22□□□□□ -2.05
CXXC4-202ENST00000466963 C14orf132Q9NPU4 83 aa2.22□□□□□ -2.05
CXXC4-202ENST00000466963 M0QZ58 72 aa2.21□□□□□ -2.06
CXXC4-202ENST00000466963 KRTAP19-3Q7Z4W3 81 aa2.21□□□□□ -2.06
CXXC4-202ENST00000466963 SPTSSBQ8NFR3 76 aa2.21□□□□□ -2.06
CXXC4-202ENST00000466963 MT1GP13640 62 aa2.21□□□□□ -2.06
CXXC4-202ENST00000466963 KRTAP5-4Q6L8H1 288 aa2.2□□□□□ -2.06
CXXC4-202ENST00000466963 A0A1B0GV72 72 aa2.2□□□□□ -2.06
CXXC4-202ENST00000466963 H3BPC8 53 aa2.19□□□□□ -2.06
CXXC4-202ENST00000466963 ATP5EP2Q5VTU8 51 aa2.17□□□□□ -2.06
CXXC4-202ENST00000466963 K7ERJ3 54 aa2.17□□□□□ -2.06
CXXC4-202ENST00000466963 TAX1BP3O14907 124 aa2.17□□□□□ -2.06
CXXC4-202ENST00000466963 A0A0A0MQY5 61 aa2.16□□□□□ -2.06
CXXC4-202ENST00000466963 SPRR5A0A1B0GTR4 108 aa2.16□□□□□ -2.06
CXXC4-202ENST00000466963 CYSTM1Q9H1C7 97 aa2.15□□□□□ -2.06
CXXC4-202ENST00000466963 AHNAK2Q8IVF2 5795 aa2.14□□□□□ -2.07
CXXC4-202ENST00000466963 TRAV7A0A075B6U4 112 aa2.14□□□□□ -2.07
CXXC4-202ENST00000466963 MT1EP04732 61 aa2.13□□□□□ -2.07
CXXC4-202ENST00000466963 PCP4P48539 62 aa2.13□□□□□ -2.07
CXXC4-202ENST00000466963 KRTAP10-7P60409 375 aaPredicted RBP2.13□□□□□ -2.07
CXXC4-202ENST00000466963 MT-ATP8P03928 68 aa2.11□□□□□ -2.07
CXXC4-202ENST00000466963 C10orf95Q9H7T3 257 aa2.1□□□□□ -2.07
CXXC4-202ENST00000466963 MP68P56378 58 aa2.1□□□□□ -2.07
CXXC4-202ENST00000466963 H0Y9P7 68 aa2.09□□□□□ -2.08
CXXC4-202ENST00000466963 KRTAP19-7Q3SYF9 63 aa2.09□□□□□ -2.08
CXXC4-202ENST00000466963 DMAC1Q96GE9 116 aa2.09□□□□□ -2.08
CXXC4-202ENST00000466963 A0A087WVE0 104 aa2.08□□□□□ -2.08
CXXC4-202ENST00000466963 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
CXXC4-202ENST00000466963 Q8N9L7 120 aa2.07□□□□□ -2.08
CXXC4-202ENST00000466963 BATFQ16520 125 aa2.06□□□□□ -2.08
CXXC4-202ENST00000466963 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
CXXC4-202ENST00000466963 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
CXXC4-202ENST00000466963 A0A1W2PPM0 123 aa2.06□□□□□ -2.08
CXXC4-202ENST00000466963 P0C880 135 aa2.05□□□□□ -2.08
CXXC4-202ENST00000466963 PYY3Q5JQD4 70 aa2.05□□□□□ -2.08
CXXC4-202ENST00000466963 FAM240AA0A1B0GVK7 77 aa2.04□□□□□ -2.08
CXXC4-202ENST00000466963 MT4P47944 62 aa2.04□□□□□ -2.08
CXXC4-202ENST00000466963 MT1MQ8N339 61 aa2.04□□□□□ -2.08
CXXC4-202ENST00000466963 KRTAP12-4P60329 112 aa2.04□□□□□ -2.08
CXXC4-202ENST00000466963 ACYP2P14621 99 aa2.03□□□□□ -2.08
CXXC4-202ENST00000466963 CAMK2N1Q7Z7J9 78 aa2.03□□□□□ -2.08
CXXC4-202ENST00000466963 KRTAP20-2Q3LI61 65 aa2.01□□□□□ -2.09
CXXC4-202ENST00000466963 LINC01554Q52M75 96 aa2.01□□□□□ -2.09
CXXC4-202ENST00000466963 SPCS1Q9Y6A9 102 aa2□□□□□ -2.09
CXXC4-202ENST00000466963 MT1LQ93083 61 aa2□□□□□ -2.09
CXXC4-202ENST00000466963 SMIM6P0DI80 62 aa1.99□□□□□ -2.09
CXXC4-202ENST00000466963 F8W1H4 67 aa1.99□□□□□ -2.09
CXXC4-202ENST00000466963 LINC00208Q96KT6 92 aa1.98□□□□□ -2.09
CXXC4-202ENST00000466963 GTF2H5Q6ZYL4 71 aa1.97□□□□□ -2.09
CXXC4-202ENST00000466963 SCGB1A1P11684 91 aa1.97□□□□□ -2.09
CXXC4-202ENST00000466963 K7EP34 96 aa1.96□□□□□ -2.1
CXXC4-202ENST00000466963 PRO0461Q9UI25 63 aa1.95□□□□□ -2.1
CXXC4-202ENST00000466963 SMIM20Q8N5G0 67 aa1.95□□□□□ -2.1
CXXC4-202ENST00000466963 KRTAP19-5Q3LI72 72 aa1.95□□□□□ -2.1
CXXC4-202ENST00000466963 OCR1Q9BZK8 76 aa1.95□□□□□ -2.1
CXXC4-202ENST00000466963 KRTAP5-5Q701N2 237 aaPredicted RBP1.94□□□□□ -2.1
CXXC4-202ENST00000466963 LINC00643Q86TS7 51 aa1.94□□□□□ -2.1
CXXC4-202ENST00000466963 A0A0D9SG42 100 aa1.94□□□□□ -2.1
CXXC4-202ENST00000466963 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
CXXC4-202ENST00000466963 CHKB-CPT1BH3BT56 60 aa1.92□□□□□ -2.1
CXXC4-202ENST00000466963 MT3P25713 68 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms