RNA–Protein interactions for RNA: ENST00000465567.1

TTC19-202, Transcript of tetratricopeptide repeat domain 19, humanhuman

TSL 1 (best)

Gene TTC19, Length 2,801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-202ENST00000465567 STAB2Q8WWQ8 2551 aa2.55□□□□□ -2
TTC19-202ENST00000465567 DYNC2H1Q8NCM8 4307 aaKnown RBP2.54□□□□□ -2
TTC19-202ENST00000465567 SPINK1P00995 79 aa2.54□□□□□ -2
TTC19-202ENST00000465567 KRTAP13-2Q52LG2 175 aa2.54□□□□□ -2
TTC19-202ENST00000465567 KRTAP5-3Q6L8H2 238 aa2.54□□□□□ -2
TTC19-202ENST00000465567 COL6A5A8TX70 2615 aa2.53□□□□□ -2
TTC19-202ENST00000465567 RPS29P62273 56 aaKnown RBP2.53□□□□□ -2
TTC19-202ENST00000465567 KIAA1109Q2LD37 5005 aa2.52□□□□□ -2.01
TTC19-202ENST00000465567 RYR2Q92736 4967 aa2.51□□□□□ -2.01
TTC19-202ENST00000465567 Q6ZSA8 131 aa2.51□□□□□ -2.01
TTC19-202ENST00000465567 KRTAP1-4P0C5Y4 121 aa2.5□□□□□ -2.01
TTC19-202ENST00000465567 LCE1AQ5T7P2 110 aa2.5□□□□□ -2.01
TTC19-202ENST00000465567 COL7A1Q02388 2944 aa2.49□□□□□ -2.01
TTC19-202ENST00000465567 H0YAA0 97 aa2.49□□□□□ -2.01
TTC19-202ENST00000465567 DNAH8Q96JB1 4490 aa2.49□□□□□ -2.01
TTC19-202ENST00000465567 KRTAP10-8P60410 259 aa2.49□□□□□ -2.01
TTC19-202ENST00000465567 H1FX-AS1Q4G0G2 97 aa2.49□□□□□ -2.01
TTC19-202ENST00000465567 MGAM2Q2M2H8 2515 aa2.48□□□□□ -2.01
TTC19-202ENST00000465567 PLECQ15149 4684 aaKnown RBP2.48□□□□□ -2.01
TTC19-202ENST00000465567 KRTAP9-8Q9BYQ0 159 aa2.48□□□□□ -2.01
TTC19-202ENST00000465567 HECTD4Q9Y4D8 3996 aa2.47□□□□□ -2.01
TTC19-202ENST00000465567 VPS13DQ5THJ4 4388 aa2.47□□□□□ -2.01
TTC19-202ENST00000465567 DNAH17Q9UFH2 4485 aa2.47□□□□□ -2.01
TTC19-202ENST00000465567 DNAH7Q8WXX0 4024 aa2.47□□□□□ -2.01
TTC19-202ENST00000465567 CSMD3Q7Z407 3707 aa2.46□□□□□ -2.01
TTC19-202ENST00000465567 KRTAP10-1P60331 282 aa2.46□□□□□ -2.02
TTC19-202ENST00000465567 MEGF8Q7Z7M0 2845 aa2.44□□□□□ -2.02
TTC19-202ENST00000465567 HYDINQ4G0P3 5121 aa2.44□□□□□ -2.02
TTC19-202ENST00000465567 FRAS1Q86XX4 4008 aa2.44□□□□□ -2.02
TTC19-202ENST00000465567 EPPK1P58107 5090 aaKnown RBP2.44□□□□□ -2.02
TTC19-202ENST00000465567 PLAC4Q8WY50 150 aa2.44□□□□□ -2.02
TTC19-202ENST00000465567 COX6B2Q6YFQ2 88 aa2.43□□□□□ -2.02
TTC19-202ENST00000465567 TGP01266 2768 aa2.43□□□□□ -2.02
TTC19-202ENST00000465567 KRTAP12-2P59991 146 aa2.42□□□□□ -2.02
TTC19-202ENST00000465567 STARD9Q9P2P6 4700 aa2.42□□□□□ -2.02
TTC19-202ENST00000465567 PRKDCP78527 4128 aaKnown RBP2.42□□□□□ -2.02
TTC19-202ENST00000465567 RYR1P21817 5038 aa2.41□□□□□ -2.02
TTC19-202ENST00000465567 FAT3Q8TDW7 4589 aa2.41□□□□□ -2.02
TTC19-202ENST00000465567 RPL37P61927 97 aaKnown RBP2.41□□□□□ -2.02
TTC19-202ENST00000465567 DNAH2Q9P225 4427 aa2.4□□□□□ -2.02
TTC19-202ENST00000465567 C9orf92A6NGG3 77 aa2.4□□□□□ -2.03
TTC19-202ENST00000465567 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.03
TTC19-202ENST00000465567 KRTAP2-2Q9BYT5 123 aa2.38□□□□□ -2.03
TTC19-202ENST00000465567 DNAH11Q96DT5 4516 aa2.38□□□□□ -2.03
TTC19-202ENST00000465567 DNAH6Q9C0G6 4158 aa2.37□□□□□ -2.03
TTC19-202ENST00000465567 DNAH5Q8TE73 4624 aa2.36□□□□□ -2.03
TTC19-202ENST00000465567 KMT2AQ03164 3969 aa2.36□□□□□ -2.03
TTC19-202ENST00000465567 PP632Q6XCG6 107 aa2.35□□□□□ -2.03
TTC19-202ENST00000465567 KMT2CQ8NEZ4 4911 aaKnown RBP2.35□□□□□ -2.03
TTC19-202ENST00000465567 CRIPTQ9P021 101 aa2.34□□□□□ -2.03
TTC19-202ENST00000465567 S4R3F8 94 aa2.34□□□□□ -2.03
TTC19-202ENST00000465567 LRP1BQ9NZR2 4599 aa2.34□□□□□ -2.03
TTC19-202ENST00000465567 KRTAP10-6P60371 365 aaPredicted RBP2.34□□□□□ -2.04
TTC19-202ENST00000465567 HERC1Q15751 4861 aa2.32□□□□□ -2.04
TTC19-202ENST00000465567 A0A0D9SG42 100 aa2.32□□□□□ -2.04
TTC19-202ENST00000465567 PKD1P98161 4303 aa2.32□□□□□ -2.04
TTC19-202ENST00000465567 UBR4Q5T4S7 5183 aa2.31□□□□□ -2.04
TTC19-202ENST00000465567 SMR3BP02814 79 aaPredicted RBP2.31□□□□□ -2.04
TTC19-202ENST00000465567 VPS13BQ7Z7G8 4022 aa2.3□□□□□ -2.04
TTC19-202ENST00000465567 SACSQ9NZJ4 4579 aa2.3□□□□□ -2.04
TTC19-202ENST00000465567 KRTAP13-4Q3LI77 160 aa2.3□□□□□ -2.04
TTC19-202ENST00000465567 KRTAP10-4P60372 401 aaPredicted RBP2.3□□□□□ -2.04
TTC19-202ENST00000465567 CRCT1Q9UGL9 99 aa2.3□□□□□ -2.04
TTC19-202ENST00000465567 M0QZ58 72 aa2.28□□□□□ -2.04
TTC19-202ENST00000465567 FAT2Q9NYQ8 4349 aa2.28□□□□□ -2.05
TTC19-202ENST00000465567 A0A1B0GVY2 172 aa2.27□□□□□ -2.05
TTC19-202ENST00000465567 MT3P25713 68 aa2.27□□□□□ -2.05
TTC19-202ENST00000465567 KRTAP12-1P59990 96 aa2.26□□□□□ -2.05
TTC19-202ENST00000465567 C10orf95Q9H7T3 257 aa2.26□□□□□ -2.05
TTC19-202ENST00000465567 PKHD1L1Q86WI1 4243 aa2.25□□□□□ -2.05
TTC19-202ENST00000465567 FLG2Q5D862 2391 aaPredicted RBP2.25□□□□□ -2.05
TTC19-202ENST00000465567 ABCA13Q86UQ4 5058 aa2.24□□□□□ -2.05
TTC19-202ENST00000465567 PKHD1P08F94 4074 aa2.24□□□□□ -2.05
TTC19-202ENST00000465567 APOBP04114 4563 aaKnown RBP2.24□□□□□ -2.05
TTC19-202ENST00000465567 FAT4Q6V0I7 4981 aa2.2□□□□□ -2.06
TTC19-202ENST00000465567 DMBT1Q9UGM3 2413 aaPredicted RBP2.2□□□□□ -2.06
TTC19-202ENST00000465567 SPRR5A0A1B0GTR4 108 aa2.2□□□□□ -2.06
TTC19-202ENST00000465567 DYNC1H1Q14204 4646 aaKnown RBP2.19□□□□□ -2.06
TTC19-202ENST00000465567 Q5VSD8 79 aa2.19□□□□□ -2.06
TTC19-202ENST00000465567 SSPOA2VEC9 5147 aa2.17□□□□□ -2.06
TTC19-202ENST00000465567 LRP1Q07954 4544 aaKnown RBP2.15□□□□□ -2.06
TTC19-202ENST00000465567 FAT1Q14517 4588 aa2.15□□□□□ -2.07
TTC19-202ENST00000465567 TNXBP22105 4242 aa2.15□□□□□ -2.07
TTC19-202ENST00000465567 LCE1FQ5T754 118 aa2.14□□□□□ -2.07
TTC19-202ENST00000465567 MUC2Q02817 5179 aa2.13□□□□□ -2.07
TTC19-202ENST00000465567 MT1HL1P0DM35 61 aa2.12□□□□□ -2.07
TTC19-202ENST00000465567 HSPG2P98160 4391 aa2.12□□□□□ -2.07
TTC19-202ENST00000465567 KRTAP10-7P60409 375 aaPredicted RBP2.12□□□□□ -2.07
TTC19-202ENST00000465567 LCE1EQ5T753 118 aa2.07□□□□□ -2.08
TTC19-202ENST00000465567 KRTAP20-1Q3LI63 56 aa2.06□□□□□ -2.08
TTC19-202ENST00000465567 TNP1P09430 55 aa2.04□□□□□ -2.08
TTC19-202ENST00000465567 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
TTC19-202ENST00000465567 HMCN2Q8NDA2 5059 aa2.03□□□□□ -2.08
TTC19-202ENST00000465567 MYCBP2O75592 4640 aa2.03□□□□□ -2.08
TTC19-202ENST00000465567 GPR98Q8WXG9 6306 aa2□□□□□ -2.09
TTC19-202ENST00000465567 KRTAP10-12P60413 245 aa1.99□□□□□ -2.09
TTC19-202ENST00000465567 LRP2P98164 4655 aa1.99□□□□□ -2.09
TTC19-202ENST00000465567 KRTAP6-3Q3LI67 103 aa1.98□□□□□ -2.09
TTC19-202ENST00000465567 LPAP08519 4548 aa1.98□□□□□ -2.09
TTC19-202ENST00000465567 KRTAP10-5P60370 271 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms