RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 FAT2Q9NYQ8 4349 aa1.13□□□□□ -2.23
SNX4-202ENST00000465505 PCNTO95613 3336 aa1.12□□□□□ -2.23
SNX4-202ENST00000465505 DOPEY1Q5JWR5 2465 aa1.12□□□□□ -2.23
SNX4-202ENST00000465505 CENPEQ02224 2701 aa1.12□□□□□ -2.23
SNX4-202ENST00000465505 XIRP2A4UGR9 3374 aa1.12□□□□□ -2.23
SNX4-202ENST00000465505 HSPG2P98160 4391 aa1.12□□□□□ -2.23
SNX4-202ENST00000465505 TRRAPQ9Y4A5 3859 aa1.12□□□□□ -2.23
SNX4-202ENST00000465505 TENM4Q6N022 2769 aa1.12□□□□□ -2.23
SNX4-202ENST00000465505 COL7A1Q02388 2944 aa1.12□□□□□ -2.23
SNX4-202ENST00000465505 CD52P31358 61 aa1.12□□□□□ -2.23
SNX4-202ENST00000465505 LINC01556Q5JQF7 62 aa1.12□□□□□ -2.23
SNX4-202ENST00000465505 MUC3AQ02505 3323 aa1.12□□□□□ -2.23
SNX4-202ENST00000465505 FAT3Q8TDW7 4589 aa1.12□□□□□ -2.23
SNX4-202ENST00000465505 LAMA5O15230 3695 aa1.11□□□□□ -2.23
SNX4-202ENST00000465505 SPTAN1Q13813 2472 aaKnown RBP1.11□□□□□ -2.23
SNX4-202ENST00000465505 EP400Q96L91 3159 aa1.11□□□□□ -2.23
SNX4-202ENST00000465505 DNAH9Q9NYC9 4486 aa1.11□□□□□ -2.23
SNX4-202ENST00000465505 DNAH6Q9C0G6 4158 aa1.1□□□□□ -2.23
SNX4-202ENST00000465505 TNP1P09430 55 aa1.1□□□□□ -2.23
SNX4-202ENST00000465505 KRTAP2-3P0C7H8 128 aa1.1□□□□□ -2.23
SNX4-202ENST00000465505 SPINK6Q6UWN8 80 aa1.1□□□□□ -2.23
SNX4-202ENST00000465505 KRTAP2-4Q9BYR9 128 aa1.1□□□□□ -2.23
SNX4-202ENST00000465505 KRTAP2-1Q9BYU5 128 aa1.1□□□□□ -2.23
SNX4-202ENST00000465505 NBEAL2Q6ZNJ1 2754 aa1.1□□□□□ -2.23
SNX4-202ENST00000465505 NIPBLQ6KC79 2804 aaeCLIP1.1□□□□□ -2.23
SNX4-202ENST00000465505 MTORP42345 2549 aa1.1□□□□□ -2.23
SNX4-202ENST00000465505 LAMA2P24043 3122 aaKnown RBP1.09□□□□□ -2.23
SNX4-202ENST00000465505 GCN1Q92616 2671 aaKnown RBP1.09□□□□□ -2.23
SNX4-202ENST00000465505 CSMD1Q96PZ7 3565 aa1.09□□□□□ -2.23
SNX4-202ENST00000465505 LOC400499M0QZD8 3231 aa1.09□□□□□ -2.23
SNX4-202ENST00000465505 A0A096LNI7 61 aa1.09□□□□□ -2.23
SNX4-202ENST00000465505 A0A096LPF7 62 aa1.09□□□□□ -2.23
SNX4-202ENST00000465505 USP9XQ93008 2570 aaPredicted RBP1.09□□□□□ -2.24
SNX4-202ENST00000465505 USP34Q70CQ2 3546 aa1.09□□□□□ -2.24
SNX4-202ENST00000465505 ZANQ9Y493 2812 aa1.09□□□□□ -2.24
SNX4-202ENST00000465505 TACC2O95359 2948 aa1.09□□□□□ -2.24
SNX4-202ENST00000465505 FBN2P35556 2912 aa1.09□□□□□ -2.24
SNX4-202ENST00000465505 KRTAP10-4P60372 401 aaPredicted RBP1.08□□□□□ -2.24
SNX4-202ENST00000465505 ANKRD11Q6UB99 2663 aaPredicted RBP1.08□□□□□ -2.24
SNX4-202ENST00000465505 ITPR2Q14571 2701 aa1.08□□□□□ -2.24
SNX4-202ENST00000465505 TGP01266 2768 aa1.08□□□□□ -2.24
SNX4-202ENST00000465505 HECTD4Q9Y4D8 3996 aa1.07□□□□□ -2.24
SNX4-202ENST00000465505 MYO18BQ8IUG5 2567 aa1.07□□□□□ -2.24
SNX4-202ENST00000465505 NSD1Q96L73 2696 aaPredicted RBP1.07□□□□□ -2.24
SNX4-202ENST00000465505 LAMA3Q16787 3333 aa1.07□□□□□ -2.24
SNX4-202ENST00000465505 ACACBO00763 2458 aa1.07□□□□□ -2.24
SNX4-202ENST00000465505 TEX15Q9BXT5 2789 aa1.07□□□□□ -2.24
SNX4-202ENST00000465505 DNAH17Q9UFH2 4485 aa1.07□□□□□ -2.24
SNX4-202ENST00000465505 TLN2Q9Y4G6 2542 aa1.07□□□□□ -2.24
SNX4-202ENST00000465505 HIVEP1P15822 2718 aa1.06□□□□□ -2.24
SNX4-202ENST00000465505 TENM1Q9UKZ4 2725 aa1.06□□□□□ -2.24
SNX4-202ENST00000465505 ZFYVE26Q68DK2 2539 aa1.06□□□□□ -2.24
SNX4-202ENST00000465505 C9orf92A6NGG3 77 aa1.06□□□□□ -2.24
SNX4-202ENST00000465505 J3QKU1 62 aa1.06□□□□□ -2.24
SNX4-202ENST00000465505 KRTAP21-3Q3LHN1 58 aa1.06□□□□□ -2.24
SNX4-202ENST00000465505 STAB1Q9NY15 2570 aa1.06□□□□□ -2.24
SNX4-202ENST00000465505 APOBP04114 4563 aaKnown RBP1.06□□□□□ -2.24
SNX4-202ENST00000465505 DNAH5Q8TE73 4624 aa1.06□□□□□ -2.24
SNX4-202ENST00000465505 TNXBP22105 4242 aa1.06□□□□□ -2.24
SNX4-202ENST00000465505 TEP1Q99973 2627 aaKnown RBP1.05□□□□□ -2.24
SNX4-202ENST00000465505 RPS29P62273 56 aaKnown RBP1.05□□□□□ -2.24
SNX4-202ENST00000465505 DEFB135Q30KP9 77 aa1.05□□□□□ -2.24
SNX4-202ENST00000465505 ASPMQ8IZT6 3477 aa1.05□□□□□ -2.24
SNX4-202ENST00000465505 NBEAL1Q6ZS30 2694 aa1.04□□□□□ -2.24
SNX4-202ENST00000465505 PKD1L1Q8TDX9 2849 aa1.04□□□□□ -2.24
SNX4-202ENST00000465505 MXRA5Q9NR99 2828 aa1.04□□□□□ -2.24
SNX4-202ENST00000465505 HRNRQ86YZ3 2850 aaPredicted RBP1.04□□□□□ -2.24
SNX4-202ENST00000465505 NOTCH1P46531 2555 aa1.04□□□□□ -2.24
SNX4-202ENST00000465505 UNC79Q9P2D8 2635 aa1.04□□□□□ -2.24
SNX4-202ENST00000465505 PLECQ15149 4684 aaKnown RBP1.04□□□□□ -2.24
SNX4-202ENST00000465505 PKHD1P08F94 4074 aa1.04□□□□□ -2.24
SNX4-202ENST00000465505 SPART-AS1P0CW21 52 aa1.03□□□□□ -2.24
SNX4-202ENST00000465505 UNC80Q8N2C7 3258 aa1.02□□□□□ -2.25
SNX4-202ENST00000465505 KRTAP8-1Q8IUC2 63 aa1.02□□□□□ -2.25
SNX4-202ENST00000465505 SMR3AQ99954 134 aa1.02□□□□□ -2.25
SNX4-202ENST00000465505 ADGRG4Q8IZF6 3080 aa1.02□□□□□ -2.25
SNX4-202ENST00000465505 M0R2T5 61 aa1.01□□□□□ -2.25
SNX4-202ENST00000465505 VCANP13611 3396 aa1□□□□□ -2.25
SNX4-202ENST00000465505 FLNAP21333 2647 aaKnown RBP1□□□□□ -2.25
SNX4-202ENST00000465505 STAB2Q8WWQ8 2551 aa1□□□□□ -2.25
SNX4-202ENST00000465505 DEFB133Q30KQ1 61 aa1□□□□□ -2.25
SNX4-202ENST00000465505 CSMD2Q7Z408 3487 aa1□□□□□ -2.25
SNX4-202ENST00000465505 TENM3Q9P273 2699 aa1□□□□□ -2.25
SNX4-202ENST00000465505 FASNP49327 2511 aaKnown RBP0.99□□□□□ -2.25
SNX4-202ENST00000465505 LRP1Q07954 4544 aaKnown RBP0.99□□□□□ -2.25
SNX4-202ENST00000465505 FLNBO75369 2602 aaKnown RBP0.99□□□□□ -2.25
SNX4-202ENST00000465505 CUBNO60494 3623 aa0.98□□□□□ -2.25
SNX4-202ENST00000465505 U3KQA8 63 aa0.98□□□□□ -2.25
SNX4-202ENST00000465505 MYO9AB2RTY4 2548 aa0.97□□□□□ -2.25
SNX4-202ENST00000465505 CEP295Q9C0D2 2601 aa0.97□□□□□ -2.25
SNX4-202ENST00000465505 SVEP1Q4LDE5 3571 aa0.97□□□□□ -2.25
SNX4-202ENST00000465505 DYNC1H1Q14204 4646 aaKnown RBP0.96□□□□□ -2.25
SNX4-202ENST00000465505 BRCA2P51587 3418 aa0.95□□□□□ -2.26
SNX4-202ENST00000465505 MYO15AQ9UKN7 3530 aa0.95□□□□□ -2.26
SNX4-202ENST00000465505 MGAM2Q2M2H8 2515 aa0.94□□□□□ -2.26
SNX4-202ENST00000465505 VPS13CQ709C8 3753 aa0.94□□□□□ -2.26
SNX4-202ENST00000465505 WDFY3Q8IZQ1 3526 aa0.94□□□□□ -2.26
SNX4-202ENST00000465505 DNAH14Q0VDD8 3507 aa0.93□□□□□ -2.26
SNX4-202ENST00000465505 MUC17Q685J3 4493 aa0.92□□□□□ -2.26
SNX4-202ENST00000465505 IGSF10Q6WRI0 2623 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms