RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 TPRXLQ17RH7 258 aa2.09□□□□□ -2.07
UBR4-209ENST00000465036 COL5A1-AS1Q5SY13 56 aa2.09□□□□□ -2.07
UBR4-209ENST00000465036 IGFL1Q6UW32 110 aa2.09□□□□□ -2.07
UBR4-209ENST00000465036 SMIM11BQ8TCY0 68 aa2.09□□□□□ -2.07
UBR4-209ENST00000465036 SPRR1BP22528 89 aa2.08□□□□□ -2.08
UBR4-209ENST00000465036 DEFB105AQ8NG35 78 aa2.08□□□□□ -2.08
UBR4-209ENST00000465036 SNHG12Q9BXW3 62 aa2.08□□□□□ -2.08
UBR4-209ENST00000465036 SNCGO76070 127 aa2.07□□□□□ -2.08
UBR4-209ENST00000465036 COX8AP10176 69 aa2.07□□□□□ -2.08
UBR4-209ENST00000465036 SPATA45Q537H7 98 aa2.07□□□□□ -2.08
UBR4-209ENST00000465036 SPAG11AQ6PDA7 123 aa2.07□□□□□ -2.08
UBR4-209ENST00000465036 FP248Q71RG6 208 aaPredicted RBP2.07□□□□□ -2.08
UBR4-209ENST00000465036 SSBP3-AS1Q7Z2R9 100 aa2.07□□□□□ -2.08
UBR4-209ENST00000465036 TRAV13-2A0A0B4J235 113 aa2.06□□□□□ -2.08
UBR4-209ENST00000465036 SPINK1P00995 79 aa2.06□□□□□ -2.08
UBR4-209ENST00000465036 Q1T7F1 81 aa2.06□□□□□ -2.08
UBR4-209ENST00000465036 IGLV5-48A0A075B6I7 105 aa2.05□□□□□ -2.08
UBR4-209ENST00000465036 TEX49A0A1B0GTD5 131 aa2.05□□□□□ -2.08
UBR4-209ENST00000465036 PYY3Q5JQD4 70 aa2.05□□□□□ -2.08
UBR4-209ENST00000465036 LINC00575Q6W349 94 aa2.05□□□□□ -2.08
UBR4-209ENST00000465036 DSCR8Q96T75 97 aa2.05□□□□□ -2.08
UBR4-209ENST00000465036 VAMP8Q9BV40 100 aa2.05□□□□□ -2.08
UBR4-209ENST00000465036 KRTAP4-1Q9BYQ7 146 aa2.05□□□□□ -2.08
UBR4-209ENST00000465036 RPS29P62273 56 aaKnown RBP2.04□□□□□ -2.08
UBR4-209ENST00000465036 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.04□□□□□ -2.08
UBR4-209ENST00000465036 Q6ZQY7 126 aa2.04□□□□□ -2.08
UBR4-209ENST00000465036 HIGD1BQ9P298 99 aa2.04□□□□□ -2.08
UBR4-209ENST00000465036 hADV29S1A0JD25 119 aa2.03□□□□□ -2.08
UBR4-209ENST00000465036 C9orf92A6NGG3 77 aa2.03□□□□□ -2.08
UBR4-209ENST00000465036 PRO1933Q9H354 126 aa2.03□□□□□ -2.08
UBR4-209ENST00000465036 F8W1H4 67 aa2.02□□□□□ -2.09
UBR4-209ENST00000465036 H3BUT2 72 aa2.02□□□□□ -2.09
UBR4-209ENST00000465036 COX7CP15954 63 aa2.02□□□□□ -2.09
UBR4-209ENST00000465036 PPDPFLQ8WWR9 84 aa2.02□□□□□ -2.09
UBR4-209ENST00000465036 ORMDL1Q9P0S3 153 aa2.02□□□□□ -2.09
UBR4-209ENST00000465036 BVES-AS1Q5T3Y7 98 aa2.01□□□□□ -2.09
UBR4-209ENST00000465036 LIMD2Q9BT23 127 aa2.01□□□□□ -2.09
UBR4-209ENST00000465036 PRO1854Q9UHT4 67 aa2.01□□□□□ -2.09
UBR4-209ENST00000465036 FLGP20930 4061 aaPredicted RBP2.01□□□□□ -2.09
UBR4-209ENST00000465036 RBM3P98179 157 aaKnown RBP2□□□□□ -2.09
UBR4-209ENST00000465036 TRBV7-7A0A0K0K1E9 115 aa1.99□□□□□ -2.09
UBR4-209ENST00000465036 F8WEM9 126 aa1.99□□□□□ -2.09
UBR4-209ENST00000465036 H0YGX0 51 aa1.99□□□□□ -2.09
UBR4-209ENST00000465036 ATP5EP56381 51 aaPredicted RBP1.99□□□□□ -2.09
UBR4-209ENST00000465036 KRTAP19-2Q3LHN2 52 aa1.99□□□□□ -2.09
UBR4-209ENST00000465036 PCOTHQ58A44 107 aa1.99□□□□□ -2.09
UBR4-209ENST00000465036 UQCR10Q9UDW1 63 aa1.99□□□□□ -2.09
UBR4-209ENST00000465036 Q6JHZ5 121 aa1.98□□□□□ -2.09
UBR4-209ENST00000465036 CSAG1Q6PB30 78 aa1.98□□□□□ -2.09
UBR4-209ENST00000465036 MT-ATP8P03928 68 aa1.97□□□□□ -2.09
UBR4-209ENST00000465036 Q96NJ1 140 aa1.97□□□□□ -2.09
UBR4-209ENST00000465036 CDC42SE1Q9NRR8 79 aa1.97□□□□□ -2.09
UBR4-209ENST00000465036 RPL37P61927 97 aaKnown RBP1.96□□□□□ -2.1
UBR4-209ENST00000465036 COA5Q86WW8 74 aa1.96□□□□□ -2.1
UBR4-209ENST00000465036 SPTSSBQ8NFR3 76 aa1.96□□□□□ -2.1
UBR4-209ENST00000465036 OBSCN-AS1Q96MR7 158 aa1.96□□□□□ -2.1
UBR4-209ENST00000465036 USH2AO75445 5202 aa1.96□□□□□ -2.1
UBR4-209ENST00000465036 DNAL4O96015 105 aa1.95□□□□□ -2.1
UBR4-209ENST00000465036 COX6CP09669 75 aa1.95□□□□□ -2.1
UBR4-209ENST00000465036 DMAC1Q96GE9 116 aa1.94□□□□□ -2.1
UBR4-209ENST00000465036 TRBV7-4A0A0J9YYF1 115 aa1.93□□□□□ -2.1
UBR4-209ENST00000465036 JMJD7-PLA2G4BH0Y9G9 81 aa1.93□□□□□ -2.1
UBR4-209ENST00000465036 CCKP06307 115 aa1.93□□□□□ -2.1
UBR4-209ENST00000465036 MT1HP80294 61 aa1.93□□□□□ -2.1
UBR4-209ENST00000465036 LINC00472Q9H8W2 130 aa1.93□□□□□ -2.1
UBR4-209ENST00000465036 FSIP2Q5CZC0 6907 aa1.93□□□□□ -2.1
UBR4-209ENST00000465036 IGKV4-1P06312 121 aa1.92□□□□□ -2.1
UBR4-209ENST00000465036 SSPOA2VEC9 5147 aa1.92□□□□□ -2.1
UBR4-209ENST00000465036 HCG22E2RYF7 251 aa1.91□□□□□ -2.1
UBR4-209ENST00000465036 KRTAP12-3P60328 96 aa1.91□□□□□ -2.1
UBR4-209ENST00000465036 ATXN8Q156A1 80 aa1.91□□□□□ -2.1
UBR4-209ENST00000465036 PDE6GP18545 87 aa1.9□□□□□ -2.11
UBR4-209ENST00000465036 A0A1W2PPM0 123 aa1.89□□□□□ -2.11
UBR4-209ENST00000465036 CYP4F30PQ9H0H9 118 aa1.89□□□□□ -2.11
UBR4-209ENST00000465036 LOC110117498A0A087WWA1 95 aa1.88□□□□□ -2.11
UBR4-209ENST00000465036 COX6B2Q6YFQ2 88 aa1.88□□□□□ -2.11
UBR4-209ENST00000465036 IGKV3D-7A0A0C4DH55 119 aa1.87□□□□□ -2.11
UBR4-209ENST00000465036 M0R2T5 61 aa1.87□□□□□ -2.11
UBR4-209ENST00000465036 INE1O15225 51 aa1.87□□□□□ -2.11
UBR4-209ENST00000465036 SPCS1Q9Y6A9 102 aa1.86□□□□□ -2.11
UBR4-209ENST00000465036 LOC101927531A0A1B0GV80 90 aa1.85□□□□□ -2.11
UBR4-209ENST00000465036 ATOX1O00244 68 aa1.85□□□□□ -2.11
UBR4-209ENST00000465036 NREPQ16612 68 aa1.85□□□□□ -2.11
UBR4-209ENST00000465036 SNURFQ9Y675 71 aa1.85□□□□□ -2.11
UBR4-209ENST00000465036 MMP24-AS1A0A0U1RRL7 71 aa1.84□□□□□ -2.11
UBR4-209ENST00000465036 K7EQZ3 153 aa1.84□□□□□ -2.11
UBR4-209ENST00000465036 NDUFB1O75438 58 aa1.84□□□□□ -2.11
UBR4-209ENST00000465036 ZCCHC13Q8WW36 166 aaKnown RBP1.84□□□□□ -2.11
UBR4-209ENST00000465036 K7EP34 96 aa1.83□□□□□ -2.12
UBR4-209ENST00000465036 SPINK7P58062 85 aa1.83□□□□□ -2.12
UBR4-209ENST00000465036 C20orf197Q8N268 126 aa1.83□□□□□ -2.12
UBR4-209ENST00000465036 MT2AP02795 61 aa1.82□□□□□ -2.12
UBR4-209ENST00000465036 WFDC13Q8IUB5 93 aa1.82□□□□□ -2.12
UBR4-209ENST00000465036 MRPL34Q9BQ48 92 aaKnown RBP1.82□□□□□ -2.12
UBR4-209ENST00000465036 LINC00846Q9NV44 126 aa1.82□□□□□ -2.12
UBR4-209ENST00000465036 FCGBPQ9Y6R7 5405 aaPredicted RBP1.82□□□□□ -2.12
UBR4-209ENST00000465036 MT1FP04733 61 aa1.81□□□□□ -2.12
UBR4-209ENST00000465036 SERP2Q8N6R1 65 aa1.81□□□□□ -2.12
UBR4-209ENST00000465036 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
UBR4-209ENST00000465036 NDUFC1O43677 76 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms