RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 KRTAP12-1P59990 96 aa5.52□□□□□ -1.53
RBM39-223ENST00000463004 KRTAP3-3Q9BYR6 98 aa5.52□□□□□ -1.53
RBM39-223ENST00000463004 DYNC1H1Q14204 4646 aaKnown RBP5.51□□□□□ -1.53
RBM39-223ENST00000463004 DYNC2H1Q8NCM8 4307 aaKnown RBP5.51□□□□□ -1.53
RBM39-223ENST00000463004 STARD9Q9P2P6 4700 aa5.5□□□□□ -1.53
RBM39-223ENST00000463004 KRTAP12-2P59991 146 aa5.47□□□□□ -1.53
RBM39-223ENST00000463004 A0A0A0MQY5 61 aa5.47□□□□□ -1.53
RBM39-223ENST00000463004 KRTAP13-4Q3LI77 160 aa5.47□□□□□ -1.53
RBM39-223ENST00000463004 DNAH2Q9P225 4427 aa5.46□□□□□ -1.54
RBM39-223ENST00000463004 PRKDCP78527 4128 aaKnown RBP5.46□□□□□ -1.54
RBM39-223ENST00000463004 KRTAP3-2Q9BYR7 98 aa5.45□□□□□ -1.54
RBM39-223ENST00000463004 LRP1BQ9NZR2 4599 aa5.41□□□□□ -1.54
RBM39-223ENST00000463004 FAT2Q9NYQ8 4349 aa5.39□□□□□ -1.55
RBM39-223ENST00000463004 C10orf95Q9H7T3 257 aa5.39□□□□□ -1.55
RBM39-223ENST00000463004 CMYA5Q8N3K9 4069 aa5.37□□□□□ -1.55
RBM39-223ENST00000463004 DNAH8Q96JB1 4490 aa5.35□□□□□ -1.55
RBM39-223ENST00000463004 SACSQ9NZJ4 4579 aa5.33□□□□□ -1.56
RBM39-223ENST00000463004 FAT1Q14517 4588 aa5.22□□□□□ -1.57
RBM39-223ENST00000463004 DNAH7Q8WXX0 4024 aa5.22□□□□□ -1.57
RBM39-223ENST00000463004 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
RBM39-223ENST00000463004 NDUFAF8A1L188 74 aa5.2□□□□□ -1.58
RBM39-223ENST00000463004 KRTAP4-1Q9BYQ7 146 aa5.19□□□□□ -1.58
RBM39-223ENST00000463004 RYR1P21817 5038 aa5.18□□□□□ -1.58
RBM39-223ENST00000463004 RYR2Q92736 4967 aa5.18□□□□□ -1.58
RBM39-223ENST00000463004 KMT2AQ03164 3969 aa5.17□□□□□ -1.58
RBM39-223ENST00000463004 CSMD3Q7Z407 3707 aa5.13□□□□□ -1.59
RBM39-223ENST00000463004 KRTAP17-1Q9BYP8 105 aa5.11□□□□□ -1.59
RBM39-223ENST00000463004 APOBP04114 4563 aaKnown RBP5.1□□□□□ -1.59
RBM39-223ENST00000463004 MT1HP80294 61 aa5.1□□□□□ -1.59
RBM39-223ENST00000463004 KIAA1109Q2LD37 5005 aa5.09□□□□□ -1.59
RBM39-223ENST00000463004 RYR3Q15413 4870 aa5.08□□□□□ -1.6
RBM39-223ENST00000463004 VPS13BQ7Z7G8 4022 aa5.07□□□□□ -1.6
RBM39-223ENST00000463004 HECTD4Q9Y4D8 3996 aa5.05□□□□□ -1.6
RBM39-223ENST00000463004 SPRR2GQ9BYE4 73 aa5.04□□□□□ -1.6
RBM39-223ENST00000463004 LORP23490 312 aaPredicted RBP5.03□□□□□ -1.6
RBM39-223ENST00000463004 KRTAP10-12P60413 245 aa5.03□□□□□ -1.6
RBM39-223ENST00000463004 BIRC6Q9NR09 4857 aa5.01□□□□□ -1.61
RBM39-223ENST00000463004 MT2AP02795 61 aa4.99□□□□□ -1.61
RBM39-223ENST00000463004 KRTAP15-1Q3LI76 137 aa4.94□□□□□ -1.62
RBM39-223ENST00000463004 FAT3Q8TDW7 4589 aa4.94□□□□□ -1.62
RBM39-223ENST00000463004 HSPG2P98160 4391 aa4.94□□□□□ -1.62
RBM39-223ENST00000463004 LYSTQ99698 3801 aa4.94□□□□□ -1.62
RBM39-223ENST00000463004 HYDINQ4G0P3 5121 aa4.91□□□□□ -1.62
RBM39-223ENST00000463004 MYCBP2O75592 4640 aa4.89□□□□□ -1.63
RBM39-223ENST00000463004 PKD1P98161 4303 aa4.89□□□□□ -1.63
RBM39-223ENST00000463004 MT1FP04733 61 aa4.87□□□□□ -1.63
RBM39-223ENST00000463004 KRTAP12-3P60328 96 aa4.86□□□□□ -1.63
RBM39-223ENST00000463004 HERC2O95714 4834 aa4.85□□□□□ -1.63
RBM39-223ENST00000463004 HERC1Q15751 4861 aa4.84□□□□□ -1.63
RBM39-223ENST00000463004 LRP1Q07954 4544 aaKnown RBP4.83□□□□□ -1.64
RBM39-223ENST00000463004 KRTAP19-8Q3LI54 63 aa4.82□□□□□ -1.64
RBM39-223ENST00000463004 LCE3AQ5TA76 89 aa4.8□□□□□ -1.64
RBM39-223ENST00000463004 FRAS1Q86XX4 4008 aa4.75□□□□□ -1.65
RBM39-223ENST00000463004 PKHD1P08F94 4074 aa4.75□□□□□ -1.65
RBM39-223ENST00000463004 LCE2CQ5TA81 110 aa4.75□□□□□ -1.65
RBM39-223ENST00000463004 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
RBM39-223ENST00000463004 PKHD1L1Q86WI1 4243 aa4.72□□□□□ -1.65
RBM39-223ENST00000463004 KRTAP19-1Q8IUB9 90 aa4.72□□□□□ -1.65
RBM39-223ENST00000463004 KMT2CQ8NEZ4 4911 aaKnown RBP4.7□□□□□ -1.66
RBM39-223ENST00000463004 KRTAP8-1Q8IUC2 63 aa4.68□□□□□ -1.66
RBM39-223ENST00000463004 KRTAP9-8Q9BYQ0 159 aa4.68□□□□□ -1.66
RBM39-223ENST00000463004 KRTAP19-2Q3LHN2 52 aa4.66□□□□□ -1.66
RBM39-223ENST00000463004 TNXBP22105 4242 aa4.62□□□□□ -1.67
RBM39-223ENST00000463004 KRTAP10-5P60370 271 aa4.57□□□□□ -1.68
RBM39-223ENST00000463004 KRTAP9-3Q9BYQ3 159 aa4.57□□□□□ -1.68
RBM39-223ENST00000463004 MT1BP07438 61 aa4.55□□□□□ -1.68
RBM39-223ENST00000463004 LRP2P98164 4655 aa4.55□□□□□ -1.68
RBM39-223ENST00000463004 PCLOQ9Y6V0 5065 aa4.53□□□□□ -1.68
RBM39-223ENST00000463004 EPPK1P58107 5090 aaKnown RBP4.52□□□□□ -1.69
RBM39-223ENST00000463004 INE1O15225 51 aa4.51□□□□□ -1.69
RBM39-223ENST00000463004 MT1XP80297 61 aa4.5□□□□□ -1.69
RBM39-223ENST00000463004 MUC17Q685J3 4493 aa4.49□□□□□ -1.69
RBM39-223ENST00000463004 ABCA13Q86UQ4 5058 aa4.49□□□□□ -1.69
RBM39-223ENST00000463004 KRTAP19-5Q3LI72 72 aa4.42□□□□□ -1.7
RBM39-223ENST00000463004 FLGP20930 4061 aaPredicted RBP4.4□□□□□ -1.7
RBM39-223ENST00000463004 KRTAP10-7P60409 375 aaPredicted RBP4.38□□□□□ -1.71
RBM39-223ENST00000463004 LCE2AQ5TA79 106 aaPredicted RBP4.36□□□□□ -1.71
RBM39-223ENST00000463004 LCE3CQ5T5A8 94 aa4.35□□□□□ -1.71
RBM39-223ENST00000463004 LPAP08519 4548 aa4.34□□□□□ -1.71
RBM39-223ENST00000463004 SPRR2FQ96RM1 72 aa4.34□□□□□ -1.72
RBM39-223ENST00000463004 CRCT1Q9UGL9 99 aa4.31□□□□□ -1.72
RBM39-223ENST00000463004 LCE2BO14633 110 aa4.3□□□□□ -1.72
RBM39-223ENST00000463004 LCE2DQ5TA82 110 aaPredicted RBP4.28□□□□□ -1.73
RBM39-223ENST00000463004 KRTAP19-6Q3LI70 58 aa4.25□□□□□ -1.73
RBM39-223ENST00000463004 HMCN2Q8NDA2 5059 aa4.24□□□□□ -1.73
RBM39-223ENST00000463004 RNF213Q63HN8 5207 aa4.2□□□□□ -1.74
RBM39-223ENST00000463004 MT1GP13640 62 aa4.19□□□□□ -1.74
RBM39-223ENST00000463004 SPRR5A0A1B0GTR4 108 aa4.17□□□□□ -1.74
RBM39-223ENST00000463004 FAT4Q6V0I7 4981 aa4.16□□□□□ -1.74
RBM39-223ENST00000463004 SPRR2EP22531 72 aa4.11□□□□□ -1.75
RBM39-223ENST00000463004 SPRR2BP35325 72 aa4.11□□□□□ -1.75
RBM39-223ENST00000463004 SPRR2AP35326 72 aa4.11□□□□□ -1.75
RBM39-223ENST00000463004 KRTAP4-8A0A0G2JLE6 195 aa4.09□□□□□ -1.75
RBM39-223ENST00000463004 KRTAP4-8Q9BYQ9 185 aa4.09□□□□□ -1.75
RBM39-223ENST00000463004 KRTAP19-3Q7Z4W3 81 aa4.05□□□□□ -1.76
RBM39-223ENST00000463004 MT1EP04732 61 aa4.05□□□□□ -1.76
RBM39-223ENST00000463004 KRTAP9-2Q9BYQ4 174 aa4.04□□□□□ -1.76
RBM39-223ENST00000463004 MT1LQ93083 61 aa4.02□□□□□ -1.77
RBM39-223ENST00000463004 SPRR2DP22532 72 aa3.99□□□□□ -1.77
RBM39-223ENST00000463004 UBR4Q5T4S7 5183 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms