RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 PKHD1P08F94 4074 aa1.85□□□□□ -2.11
COL8A1-204ENST00000462604 HYDINQ4G0P3 5121 aa1.85□□□□□ -2.11
COL8A1-204ENST00000462604 KRTAP10-4P60372 401 aaPredicted RBP1.84□□□□□ -2.11
COL8A1-204ENST00000462604 RPL37P61927 97 aaKnown RBP1.84□□□□□ -2.11
COL8A1-204ENST00000462604 A0A1B0GVY2 172 aa1.83□□□□□ -2.12
COL8A1-204ENST00000462604 S4R3F8 94 aa1.83□□□□□ -2.12
COL8A1-204ENST00000462604 TGP01266 2768 aa1.82□□□□□ -2.12
COL8A1-204ENST00000462604 HSPG2P98160 4391 aa1.81□□□□□ -2.12
COL8A1-204ENST00000462604 A0A0D9SG42 100 aa1.81□□□□□ -2.12
COL8A1-204ENST00000462604 KRTAP21-3Q3LHN1 58 aa1.81□□□□□ -2.12
COL8A1-204ENST00000462604 TNXBP22105 4242 aa1.8□□□□□ -2.12
COL8A1-204ENST00000462604 FAT1Q14517 4588 aa1.8□□□□□ -2.12
COL8A1-204ENST00000462604 KRTAP10-6P60371 365 aaPredicted RBP1.8□□□□□ -2.12
COL8A1-204ENST00000462604 CRIPTQ9P021 101 aa1.8□□□□□ -2.12
COL8A1-204ENST00000462604 FAT3Q8TDW7 4589 aa1.8□□□□□ -2.12
COL8A1-204ENST00000462604 KRTAP10-8P60410 259 aa1.79□□□□□ -2.12
COL8A1-204ENST00000462604 XP32Q5T750 250 aa1.79□□□□□ -2.12
COL8A1-204ENST00000462604 SPINT4Q6UDR6 99 aa1.79□□□□□ -2.12
COL8A1-204ENST00000462604 RYR2Q92736 4967 aa1.79□□□□□ -2.12
COL8A1-204ENST00000462604 KRTAP13-4Q3LI77 160 aa1.78□□□□□ -2.12
COL8A1-204ENST00000462604 Q5VSD8 79 aa1.78□□□□□ -2.12
COL8A1-204ENST00000462604 LRP1Q07954 4544 aaKnown RBP1.76□□□□□ -2.13
COL8A1-204ENST00000462604 P0C880 135 aa1.76□□□□□ -2.13
COL8A1-204ENST00000462604 TPRXLQ17RH7 258 aa1.76□□□□□ -2.13
COL8A1-204ENST00000462604 M0QZ58 72 aa1.75□□□□□ -2.13
COL8A1-204ENST00000462604 LUZP6Q538Z0 58 aa1.75□□□□□ -2.13
COL8A1-204ENST00000462604 KRTAP12-1P59990 96 aa1.74□□□□□ -2.13
COL8A1-204ENST00000462604 KRTAP12-2P59991 146 aa1.74□□□□□ -2.13
COL8A1-204ENST00000462604 C10orf95Q9H7T3 257 aa1.74□□□□□ -2.13
COL8A1-204ENST00000462604 RYR1P21817 5038 aa1.72□□□□□ -2.13
COL8A1-204ENST00000462604 CAMK2N1Q7Z7J9 78 aa1.72□□□□□ -2.13
COL8A1-204ENST00000462604 MT1HL1P0DM35 61 aa1.71□□□□□ -2.14
COL8A1-204ENST00000462604 KRTAP15-1Q3LI76 137 aa1.71□□□□□ -2.14
COL8A1-204ENST00000462604 MYCBP2O75592 4640 aa1.71□□□□□ -2.14
COL8A1-204ENST00000462604 R4GN34 69 aa1.7□□□□□ -2.14
COL8A1-204ENST00000462604 FLG2Q5D862 2391 aaPredicted RBP1.7□□□□□ -2.14
COL8A1-204ENST00000462604 NDUFAF8A1L188 74 aa1.69□□□□□ -2.14
COL8A1-204ENST00000462604 KMT2CQ8NEZ4 4911 aaKnown RBP1.66□□□□□ -2.14
COL8A1-204ENST00000462604 RYR3Q15413 4870 aa1.65□□□□□ -2.15
COL8A1-204ENST00000462604 MUC17Q685J3 4493 aa1.64□□□□□ -2.15
COL8A1-204ENST00000462604 DMBT1Q9UGM3 2413 aaPredicted RBP1.64□□□□□ -2.15
COL8A1-204ENST00000462604 KRTAP19-4Q3LI73 84 aa1.64□□□□□ -2.15
COL8A1-204ENST00000462604 PP632Q6XCG6 107 aa1.64□□□□□ -2.15
COL8A1-204ENST00000462604 PLAC4Q8WY50 150 aa1.63□□□□□ -2.15
COL8A1-204ENST00000462604 KRTAP17-1Q9BYP8 105 aa1.63□□□□□ -2.15
COL8A1-204ENST00000462604 LPAP08519 4548 aa1.61□□□□□ -2.15
COL8A1-204ENST00000462604 KIAA1109Q2LD37 5005 aa1.6□□□□□ -2.15
COL8A1-204ENST00000462604 HERC1Q15751 4861 aa1.58□□□□□ -2.16
COL8A1-204ENST00000462604 LCE5AQ5TCM9 118 aa1.58□□□□□ -2.16
COL8A1-204ENST00000462604 KRTAP4-1Q9BYQ7 146 aa1.58□□□□□ -2.16
COL8A1-204ENST00000462604 LRP2P98164 4655 aa1.58□□□□□ -2.16
COL8A1-204ENST00000462604 TNP1P09430 55 aa1.57□□□□□ -2.16
COL8A1-204ENST00000462604 ABCA13Q86UQ4 5058 aa1.57□□□□□ -2.16
COL8A1-204ENST00000462604 EPPK1P58107 5090 aaKnown RBP1.57□□□□□ -2.16
COL8A1-204ENST00000462604 KRTAP4-5Q9BYR2 181 aa1.56□□□□□ -2.16
COL8A1-204ENST00000462604 FLGP20930 4061 aaPredicted RBP1.56□□□□□ -2.16
COL8A1-204ENST00000462604 KRTAP19-2Q3LHN2 52 aa1.55□□□□□ -2.16
COL8A1-204ENST00000462604 KRTAP9-9Q9BYP9 154 aa1.54□□□□□ -2.16
COL8A1-204ENST00000462604 KRTAP9-4Q9BYQ2 154 aa1.54□□□□□ -2.16
COL8A1-204ENST00000462604 BIRC6Q9NR09 4857 aa1.54□□□□□ -2.16
COL8A1-204ENST00000462604 HERC2O95714 4834 aa1.51□□□□□ -2.17
COL8A1-204ENST00000462604 SPRR5A0A1B0GTR4 108 aa1.5□□□□□ -2.17
COL8A1-204ENST00000462604 KRTAP9-6A0A140TA67 174 aa1.49□□□□□ -2.17
COL8A1-204ENST00000462604 KRTAP9-7A8MTY7 169 aa1.49□□□□□ -2.17
COL8A1-204ENST00000462604 HMCN2Q8NDA2 5059 aa1.48□□□□□ -2.17
COL8A1-204ENST00000462604 M0R2T5 61 aa1.48□□□□□ -2.17
COL8A1-204ENST00000462604 SPRR2GQ9BYE4 73 aa1.48□□□□□ -2.17
COL8A1-204ENST00000462604 PRO2289Q9P1D8 64 aa1.48□□□□□ -2.17
COL8A1-204ENST00000462604 PCLOQ9Y6V0 5065 aa1.47□□□□□ -2.17
COL8A1-204ENST00000462604 KRTAP19-1Q8IUB9 90 aa1.46□□□□□ -2.18
COL8A1-204ENST00000462604 LCE3AQ5TA76 89 aa1.45□□□□□ -2.18
COL8A1-204ENST00000462604 RNF213Q63HN8 5207 aa1.44□□□□□ -2.18
COL8A1-204ENST00000462604 KRTAP10-10P60014 251 aa1.44□□□□□ -2.18
COL8A1-204ENST00000462604 MUC2Q02817 5179 aa1.44□□□□□ -2.18
COL8A1-204ENST00000462604 MT2AP02795 61 aa1.43□□□□□ -2.18
COL8A1-204ENST00000462604 LCE1AQ5T7P2 110 aa1.43□□□□□ -2.18
COL8A1-204ENST00000462604 MT1FP04733 61 aa1.42□□□□□ -2.18
COL8A1-204ENST00000462604 MT1HP80294 61 aa1.42□□□□□ -2.18
COL8A1-204ENST00000462604 KRTAP19-8Q3LI54 63 aa1.42□□□□□ -2.18
COL8A1-204ENST00000462604 LCE4AQ5TA78 99 aa1.42□□□□□ -2.18
COL8A1-204ENST00000462604 KRTAP8-1Q8IUC2 63 aa1.42□□□□□ -2.18
COL8A1-204ENST00000462604 KRTAP10-12P60413 245 aa1.41□□□□□ -2.18
COL8A1-204ENST00000462604 INE1O15225 51 aa1.4□□□□□ -2.19
COL8A1-204ENST00000462604 KRTAP2-2Q9BYT5 123 aa1.4□□□□□ -2.19
COL8A1-204ENST00000462604 KRTAP12-3P60328 96 aa1.39□□□□□ -2.19
COL8A1-204ENST00000462604 KRTAP10-5P60370 271 aa1.39□□□□□ -2.19
COL8A1-204ENST00000462604 UBR4Q5T4S7 5183 aa1.38□□□□□ -2.19
COL8A1-204ENST00000462604 MT1BP07438 61 aa1.38□□□□□ -2.19
COL8A1-204ENST00000462604 MT1XP80297 61 aa1.38□□□□□ -2.19
COL8A1-204ENST00000462604 KRTAP9-8Q9BYQ0 159 aa1.38□□□□□ -2.19
COL8A1-204ENST00000462604 KRTAP9-3Q9BYQ3 159 aa1.38□□□□□ -2.19
COL8A1-204ENST00000462604 FAT4Q6V0I7 4981 aa1.36□□□□□ -2.19
COL8A1-204ENST00000462604 LCE1FQ5T754 118 aa1.36□□□□□ -2.19
COL8A1-204ENST00000462604 KRTAP10-7P60409 375 aaPredicted RBP1.34□□□□□ -2.19
COL8A1-204ENST00000462604 LOC100996750A0A140TA64 210 aa1.31□□□□□ -2.2
COL8A1-204ENST00000462604 KRTAP19-5Q3LI72 72 aa1.31□□□□□ -2.2
COL8A1-204ENST00000462604 LCE3CQ5T5A8 94 aa1.31□□□□□ -2.2
COL8A1-204ENST00000462604 KRTAP4-6Q9BYQ5 205 aa1.31□□□□□ -2.2
COL8A1-204ENST00000462604 KRTAP4-12Q9BQ66 201 aa1.29□□□□□ -2.2
COL8A1-204ENST00000462604 MT3P25713 68 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms