RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 KRTAP3-2Q9BYR7 98 aa8.07□□□□□ -1.12
CHRD-208ENST00000460627 DNAH11Q96DT5 4516 aa8.06□□□□□ -1.12
CHRD-208ENST00000460627 DNAH1Q9P2D7 4330 aa8.04□□□□□ -1.12
CHRD-208ENST00000460627 DNAH10Q8IVF4 4471 aa8.03□□□□□ -1.12
CHRD-208ENST00000460627 VPS13DQ5THJ4 4388 aa8.02□□□□□ -1.13
CHRD-208ENST00000460627 DNAH17Q9UFH2 4485 aa7.91□□□□□ -1.14
CHRD-208ENST00000460627 DYNC1H1Q14204 4646 aaKnown RBP7.91□□□□□ -1.14
CHRD-208ENST00000460627 STARD9Q9P2P6 4700 aa7.82□□□□□ -1.16
CHRD-208ENST00000460627 LRP1BQ9NZR2 4599 aa7.8□□□□□ -1.16
CHRD-208ENST00000460627 ANK2Q01484 3957 aa7.78□□□□□ -1.16
CHRD-208ENST00000460627 FAT1Q14517 4588 aa7.77□□□□□ -1.16
CHRD-208ENST00000460627 PRKDCP78527 4128 aaKnown RBP7.75□□□□□ -1.17
CHRD-208ENST00000460627 RYR1P21817 5038 aa7.71□□□□□ -1.18
CHRD-208ENST00000460627 KRTAP15-1Q3LI76 137 aa7.71□□□□□ -1.18
CHRD-208ENST00000460627 KRTAP4-1Q9BYQ7 146 aa7.67□□□□□ -1.18
CHRD-208ENST00000460627 KRTAP10-12P60413 245 aa7.67□□□□□ -1.18
CHRD-208ENST00000460627 DNAH2Q9P225 4427 aa7.67□□□□□ -1.18
CHRD-208ENST00000460627 DYNC2H1Q8NCM8 4307 aaKnown RBP7.66□□□□□ -1.18
CHRD-208ENST00000460627 LORP23490 312 aaPredicted RBP7.62□□□□□ -1.19
CHRD-208ENST00000460627 FAT2Q9NYQ8 4349 aa7.61□□□□□ -1.19
CHRD-208ENST00000460627 CMYA5Q8N3K9 4069 aa7.59□□□□□ -1.19
CHRD-208ENST00000460627 SACSQ9NZJ4 4579 aa7.57□□□□□ -1.2
CHRD-208ENST00000460627 DNAH3Q8TD57 4116 aa7.56□□□□□ -1.2
CHRD-208ENST00000460627 KIAA1109Q2LD37 5005 aa7.56□□□□□ -1.2
CHRD-208ENST00000460627 LYSTQ99698 3801 aa7.52□□□□□ -1.21
CHRD-208ENST00000460627 KRTAP23-1A1A580 65 aa7.51□□□□□ -1.21
CHRD-208ENST00000460627 MT1HP80294 61 aa7.51□□□□□ -1.21
CHRD-208ENST00000460627 KMT2AQ03164 3969 aa7.5□□□□□ -1.21
CHRD-208ENST00000460627 RYR3Q15413 4870 aa7.45□□□□□ -1.22
CHRD-208ENST00000460627 KRTAP12-3P60328 96 aa7.42□□□□□ -1.22
CHRD-208ENST00000460627 DNAH8Q96JB1 4490 aa7.41□□□□□ -1.22
CHRD-208ENST00000460627 MT2AP02795 61 aa7.38□□□□□ -1.23
CHRD-208ENST00000460627 KRTAP17-1Q9BYP8 105 aa7.37□□□□□ -1.23
CHRD-208ENST00000460627 DNAH7Q8WXX0 4024 aa7.36□□□□□ -1.23
CHRD-208ENST00000460627 APOBP04114 4563 aaKnown RBP7.34□□□□□ -1.23
CHRD-208ENST00000460627 LCE3AQ5TA76 89 aa7.34□□□□□ -1.23
CHRD-208ENST00000460627 SPRR2GQ9BYE4 73 aa7.32□□□□□ -1.24
CHRD-208ENST00000460627 RYR2Q92736 4967 aa7.3□□□□□ -1.24
CHRD-208ENST00000460627 DNAH6Q9C0G6 4158 aa7.27□□□□□ -1.25
CHRD-208ENST00000460627 VPS13BQ7Z7G8 4022 aa7.24□□□□□ -1.25
CHRD-208ENST00000460627 MT1FP04733 61 aa7.22□□□□□ -1.25
CHRD-208ENST00000460627 FRAS1Q86XX4 4008 aa7.2□□□□□ -1.26
CHRD-208ENST00000460627 MYCBP2O75592 4640 aa7.18□□□□□ -1.26
CHRD-208ENST00000460627 KRTAP8-1Q8IUC2 63 aa7.17□□□□□ -1.26
CHRD-208ENST00000460627 HECTD4Q9Y4D8 3996 aa7.15□□□□□ -1.26
CHRD-208ENST00000460627 HERC2O95714 4834 aa7.13□□□□□ -1.27
CHRD-208ENST00000460627 LRP1Q07954 4544 aaKnown RBP7.12□□□□□ -1.27
CHRD-208ENST00000460627 BIRC6Q9NR09 4857 aa7.11□□□□□ -1.27
CHRD-208ENST00000460627 FAT3Q8TDW7 4589 aa7.1□□□□□ -1.27
CHRD-208ENST00000460627 HYDINQ4G0P3 5121 aa7.1□□□□□ -1.27
CHRD-208ENST00000460627 CRCT1Q9UGL9 99 aa7.09□□□□□ -1.27
CHRD-208ENST00000460627 PKHD1P08F94 4074 aa6.95□□□□□ -1.3
CHRD-208ENST00000460627 KRTAP19-8Q3LI54 63 aa6.92□□□□□ -1.3
CHRD-208ENST00000460627 KRTAP19-1Q8IUB9 90 aa6.91□□□□□ -1.3
CHRD-208ENST00000460627 HSPG2P98160 4391 aa6.9□□□□□ -1.31
CHRD-208ENST00000460627 INE1O15225 51 aa6.9□□□□□ -1.31
CHRD-208ENST00000460627 LRP2P98164 4655 aa6.81□□□□□ -1.32
CHRD-208ENST00000460627 LCE2CQ5TA81 110 aa6.79□□□□□ -1.32
CHRD-208ENST00000460627 HERC1Q15751 4861 aa6.78□□□□□ -1.32
CHRD-208ENST00000460627 PKD1P98161 4303 aa6.78□□□□□ -1.32
CHRD-208ENST00000460627 KMT2CQ8NEZ4 4911 aaKnown RBP6.78□□□□□ -1.32
CHRD-208ENST00000460627 KRTAP9-8Q9BYQ0 159 aa6.77□□□□□ -1.33
CHRD-208ENST00000460627 PCLOQ9Y6V0 5065 aa6.75□□□□□ -1.33
CHRD-208ENST00000460627 SPRR2FQ96RM1 72 aa6.71□□□□□ -1.33
CHRD-208ENST00000460627 KRTAP19-5Q3LI72 72 aa6.71□□□□□ -1.34
CHRD-208ENST00000460627 KRTAP19-4Q3LI73 84 aa6.7□□□□□ -1.34
CHRD-208ENST00000460627 KRTAP10-5P60370 271 aa6.66□□□□□ -1.34
CHRD-208ENST00000460627 MT1BP07438 61 aa6.66□□□□□ -1.34
CHRD-208ENST00000460627 MT1XP80297 61 aa6.61□□□□□ -1.35
CHRD-208ENST00000460627 KRTAP9-3Q9BYQ3 159 aa6.6□□□□□ -1.35
CHRD-208ENST00000460627 KRTAP10-7P60409 375 aaPredicted RBP6.58□□□□□ -1.36
CHRD-208ENST00000460627 PKHD1L1Q86WI1 4243 aa6.57□□□□□ -1.36
CHRD-208ENST00000460627 KRTAP19-2Q3LHN2 52 aa6.57□□□□□ -1.36
CHRD-208ENST00000460627 LCE3CQ5T5A8 94 aa6.54□□□□□ -1.36
CHRD-208ENST00000460627 EPPK1P58107 5090 aaKnown RBP6.47□□□□□ -1.37
CHRD-208ENST00000460627 ABCA13Q86UQ4 5058 aa6.45□□□□□ -1.38
CHRD-208ENST00000460627 LPAP08519 4548 aa6.41□□□□□ -1.38
CHRD-208ENST00000460627 MUC17Q685J3 4493 aa6.36□□□□□ -1.39
CHRD-208ENST00000460627 TNXBP22105 4242 aa6.35□□□□□ -1.39
CHRD-208ENST00000460627 LCE2BO14633 110 aa6.3□□□□□ -1.4
CHRD-208ENST00000460627 SPRR2EP22531 72 aa6.29□□□□□ -1.4
CHRD-208ENST00000460627 SPRR2BP35325 72 aa6.29□□□□□ -1.4
CHRD-208ENST00000460627 SPRR2AP35326 72 aa6.29□□□□□ -1.4
CHRD-208ENST00000460627 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
CHRD-208ENST00000460627 KRTAP4-8Q9BYQ9 185 aa6.25□□□□□ -1.41
CHRD-208ENST00000460627 FLGP20930 4061 aaPredicted RBP6.22□□□□□ -1.41
CHRD-208ENST00000460627 MT1GP13640 62 aa6.21□□□□□ -1.42
CHRD-208ENST00000460627 LCE2AQ5TA79 106 aaPredicted RBP6.14□□□□□ -1.43
CHRD-208ENST00000460627 UBR4Q5T4S7 5183 aa6.12□□□□□ -1.43
CHRD-208ENST00000460627 RNF213Q63HN8 5207 aa6.1□□□□□ -1.43
CHRD-208ENST00000460627 FAT4Q6V0I7 4981 aa6.1□□□□□ -1.43
CHRD-208ENST00000460627 SPRR2DP22532 72 aa6.09□□□□□ -1.43
CHRD-208ENST00000460627 KRTAP19-6Q3LI70 58 aa6.07□□□□□ -1.44
CHRD-208ENST00000460627 SPRR5A0A1B0GTR4 108 aa6.01□□□□□ -1.45
CHRD-208ENST00000460627 KRTAP19-3Q7Z4W3 81 aa6□□□□□ -1.45
CHRD-208ENST00000460627 LCE2DQ5TA82 110 aaPredicted RBP5.97□□□□□ -1.45
CHRD-208ENST00000460627 KRTAP9-2Q9BYQ4 174 aa5.97□□□□□ -1.45
CHRD-208ENST00000460627 HMCN2Q8NDA2 5059 aa5.96□□□□□ -1.45
CHRD-208ENST00000460627 MT1EP04732 61 aa5.95□□□□□ -1.46
CHRD-208ENST00000460627 MT1LQ93083 61 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms