RNA–Protein interactions for RNA: ENST00000458126.6

CDKN3-205, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-205ENST00000458126 PDE6DO43924 150 aa0.28□□□□□ -2.36
CDKN3-205ENST00000458126 NAT8BQ9UHF3 227 aa0.28□□□□□ -2.36
CDKN3-205ENST00000458126 LEPROTO15243 131 aa0.27□□□□□ -2.37
CDKN3-205ENST00000458126 NEDD8Q15843 81 aa0.27□□□□□ -2.37
CDKN3-205ENST00000458126 LINC00308Q8TCZ7 52 aa0.27□□□□□ -2.37
CDKN3-205ENST00000458126 MANBALQ9NQG1 85 aa0.27□□□□□ -2.37
CDKN3-205ENST00000458126 S100A8P05109 93 aa0.26□□□□□ -2.37
CDKN3-205ENST00000458126 TNP1P09430 55 aa0.26□□□□□ -2.37
CDKN3-205ENST00000458126 Q1T7F1 81 aa0.26□□□□□ -2.37
CDKN3-205ENST00000458126 ATP5L2Q7Z4Y8 100 aa0.26□□□□□ -2.37
CDKN3-205ENST00000458126 KTN1-AS1Q86SY8 53 aa0.26□□□□□ -2.37
CDKN3-205ENST00000458126 TTTY13Q9BZ97 58 aa0.26□□□□□ -2.37
CDKN3-205ENST00000458126 HSPB8Q9UJY1 196 aa0.26□□□□□ -2.37
CDKN3-205ENST00000458126 Q6ZQT0 140 aa0.25□□□□□ -2.37
CDKN3-205ENST00000458126 BAGE3Q86Y29 109 aa0.25□□□□□ -2.37
CDKN3-205ENST00000458126 TRACP01848 142 aa0.24□□□□□ -2.37
CDKN3-205ENST00000458126 GNG13Q9P2W3 67 aa0.24□□□□□ -2.37
CDKN3-205ENST00000458126 H2BFSP57053 126 aa0.23□□□□□ -2.37
CDKN3-205ENST00000458126 SCGB1D4Q6XE38 83 aa0.23□□□□□ -2.37
CDKN3-205ENST00000458126 SMIM11BQ8TCY0 68 aa0.23□□□□□ -2.37
CDKN3-205ENST00000458126 V9GYV3 84 aa0.23□□□□□ -2.37
CDKN3-205ENST00000458126 SMLR1H3BR10 107 aa0.22□□□□□ -2.37
CDKN3-205ENST00000458126 OSTCQ9NRP0 149 aa0.22□□□□□ -2.37
CDKN3-205ENST00000458126 TRAV7A0A075B6U4 112 aa0.2□□□□□ -2.38
CDKN3-205ENST00000458126 TRGC2P03986 189 aa0.2□□□□□ -2.38
CDKN3-205ENST00000458126 ANKRD29Q8N6D5 301 aa0.2□□□□□ -2.38
CDKN3-205ENST00000458126 FAM213BQ8TBF2 198 aa0.2□□□□□ -2.38
CDKN3-205ENST00000458126 C12orf57Q99622 126 aa0.2□□□□□ -2.38
CDKN3-205ENST00000458126 SMIM27A0A1W2PRY6 76 aa0.19□□□□□ -2.38
CDKN3-205ENST00000458126 H3BT86 120 aa0.19□□□□□ -2.38
CDKN3-205ENST00000458126 CCKP06307 115 aa0.19□□□□□ -2.38
CDKN3-205ENST00000458126 LINC00614P0C842 121 aa0.19□□□□□ -2.38
CDKN3-205ENST00000458126 GNGT1P63211 74 aa0.19□□□□□ -2.38
CDKN3-205ENST00000458126 CEBPGP53567 150 aa0.18□□□□□ -2.38
CDKN3-205ENST00000458126 V9GYH0 126 aa0.17□□□□□ -2.38
CDKN3-205ENST00000458126 IFITM1P13164 125 aa0.16□□□□□ -2.38
CDKN3-205ENST00000458126 SNURFQ9Y675 71 aa0.16□□□□□ -2.38
CDKN3-205ENST00000458126 A0A1B0GW54 56 aa0.14□□□□□ -2.39
CDKN3-205ENST00000458126 HIST1H4AP62805 103 aaKnown RBP0.14□□□□□ -2.39
CDKN3-205ENST00000458126 UMAD1C9J7I0 102 aa0.13□□□□□ -2.39
CDKN3-205ENST00000458126 HSBP1L1C9JCN9 74 aa0.13□□□□□ -2.39
CDKN3-205ENST00000458126 ACYP1P07311 99 aa0.12□□□□□ -2.39
CDKN3-205ENST00000458126 TRAV12-1A0A0B4J245 112 aa0.11□□□□□ -2.39
CDKN3-205ENST00000458126 FXYD2P54710 66 aa0.11□□□□□ -2.39
CDKN3-205ENST00000458126 TRIQKQ629K1 86 aa0.11□□□□□ -2.39
CDKN3-205ENST00000458126 SRP19P09132 144 aaKnown RBP0.08□□□□□ -2.4
CDKN3-205ENST00000458126 SPATA8Q6RVD6 105 aa0.08□□□□□ -2.4
CDKN3-205ENST00000458126 BATF3Q9NR55 127 aa0.08□□□□□ -2.4
CDKN3-205ENST00000458126 FABP2P12104 132 aa0.07□□□□□ -2.4
CDKN3-205ENST00000458126 TCTE3Q8IZS6 198 aa0.07□□□□□ -2.4
CDKN3-205ENST00000458126 CYP4F30PQ9H0H9 118 aa0.07□□□□□ -2.4
CDKN3-205ENST00000458126 A0A1B0GV72 72 aa0.05□□□□□ -2.4
CDKN3-205ENST00000458126 S100PP25815 95 aa0.05□□□□□ -2.4
CDKN3-205ENST00000458126 FABP9Q0Z7S8 132 aa0.05□□□□□ -2.4
CDKN3-205ENST00000458126 NDUFA5Q16718 116 aa0.05□□□□□ -2.4
CDKN3-205ENST00000458126 VPS25Q9BRG1 176 aa0.05□□□□□ -2.4
CDKN3-205ENST00000458126 INE1O15225 51 aa0.03□□□□□ -2.4
CDKN3-205ENST00000458126 SMIM7Q9BQ49 75 aa0.03□□□□□ -2.4
CDKN3-205ENST00000458126 SSNA1O43805 119 aa0.02□□□□□ -2.41
CDKN3-205ENST00000458126 PMAIP1Q13794 54 aa0.02□□□□□ -2.41
CDKN3-205ENST00000458126 BVES-AS1Q5T3Y7 98 aa0.02□□□□□ -2.41
CDKN3-205ENST00000458126 CASC2Q6XLA1 102 aa0.02□□□□□ -2.41
CDKN3-205ENST00000458126 SMCO4Q9NRQ5 59 aa0.02□□□□□ -2.41
CDKN3-205ENST00000458126 SLC51BQ86UW2 128 aa0.01□□□□□ -2.41
CDKN3-205ENST00000458126 HIST1H2BOP23527 126 aa-0.01□□□□□ -2.41
CDKN3-205ENST00000458126 PLNP26678 52 aa-0.01□□□□□ -2.41
CDKN3-205ENST00000458126 HIST1H2BBP33778 126 aa-0.01□□□□□ -2.41
CDKN3-205ENST00000458126 HIST1H2BDP58876 126 aa-0.01□□□□□ -2.41
CDKN3-205ENST00000458126 HIST1H2BCP62807 126 aa-0.01□□□□□ -2.41
CDKN3-205ENST00000458126 HIST2H2BEQ16778 126 aa-0.01□□□□□ -2.41
CDKN3-205ENST00000458126 HIST2H2BFQ5QNW6 126 aaPredicted RBP-0.01□□□□□ -2.41
CDKN3-205ENST00000458126 COPS9Q8WXC6 57 aa-0.01□□□□□ -2.41
CDKN3-205ENST00000458126 S100ZQ8WXG8 99 aa-0.01□□□□□ -2.41
CDKN3-205ENST00000458126 HIST1H2BHQ93079 126 aa-0.01□□□□□ -2.41
CDKN3-205ENST00000458126 HIST1H2BNQ99877 126 aa-0.01□□□□□ -2.41
CDKN3-205ENST00000458126 HIST1H2BMQ99879 126 aa-0.01□□□□□ -2.41
CDKN3-205ENST00000458126 BAALC-AS2P0C853 105 aa-0.02□□□□□ -2.41
CDKN3-205ENST00000458126 HIGD1BQ9P298 99 aa-0.02□□□□□ -2.41
CDKN3-205ENST00000458126 SNCGO76070 127 aa-0.03□□□□□ -2.41
CDKN3-205ENST00000458126 PMCHL1Q16048 86 aa-0.03□□□□□ -2.41
CDKN3-205ENST00000458126 CDC42SE1Q9NRR8 79 aa-0.04□□□□□ -2.42
CDKN3-205ENST00000458126 TRAV22A0A0B4J277 110 aa-0.06□□□□□ -2.42
CDKN3-205ENST00000458126 S100A5P33763 92 aa-0.06□□□□□ -2.42
CDKN3-205ENST00000458126 HIST3H2BBQ8N257 126 aa-0.06□□□□□ -2.42
CDKN3-205ENST00000458126 IFI27L1Q96BM0 104 aa-0.06□□□□□ -2.42
CDKN3-205ENST00000458126 ADIRFQ15847 76 aa-0.07□□□□□ -2.42
CDKN3-205ENST00000458126 Q9H521 79 aa-0.1□□□□□ -2.43
CDKN3-205ENST00000458126 ROMO1P60602 79 aa-0.11□□□□□ -2.43
CDKN3-205ENST00000458126 DNAL4O96015 105 aa-0.12□□□□□ -2.43
CDKN3-205ENST00000458126 LOC101927531A0A1B0GV80 90 aa-0.13□□□□□ -2.43
CDKN3-205ENST00000458126 A0A1B0GX51 115 aa-0.13□□□□□ -2.43
CDKN3-205ENST00000458126 H0YGX0 51 aa-0.14□□□□□ -2.43
CDKN3-205ENST00000458126 ARPC5O15511 151 aa-0.14□□□□□ -2.43
CDKN3-205ENST00000458126 HIST1H2BLQ99880 126 aa-0.14□□□□□ -2.43
CDKN3-205ENST00000458126 TP53AIP1Q9HCN2 124 aa-0.14□□□□□ -2.43
CDKN3-205ENST00000458126 C14orf132Q9NPU4 83 aa-0.14□□□□□ -2.43
CDKN3-205ENST00000458126 DPM2O94777 84 aa-0.15□□□□□ -2.43
CDKN3-205ENST00000458126 TMEM256-PLSCR3K7ERE1 68 aa-0.16□□□□□ -2.44
CDKN3-205ENST00000458126 NREPQ16612 68 aa-0.16□□□□□ -2.44
CDKN3-205ENST00000458126 ORMDL1Q9P0S3 153 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms