RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 M0R143 59 aa6.18□□□□□ -1.42
LYSMD3-202ENST00000453259 SPRR2EP22531 72 aa6.18□□□□□ -1.42
LYSMD3-202ENST00000453259 SPRR2BP35325 72 aa6.18□□□□□ -1.42
LYSMD3-202ENST00000453259 SPRR2AP35326 72 aa6.18□□□□□ -1.42
LYSMD3-202ENST00000453259 SPRR2FQ96RM1 72 aa6.18□□□□□ -1.42
LYSMD3-202ENST00000453259 KRTAP4-2Q9BYR5 136 aa6.16□□□□□ -1.42
LYSMD3-202ENST00000453259 KRTAP4-11Q9BYQ6 195 aa6.15□□□□□ -1.42
LYSMD3-202ENST00000453259 KRTAP2-2Q9BYT5 123 aa6.15□□□□□ -1.42
LYSMD3-202ENST00000453259 KRTAP2-1Q9BYU5 128 aa6.15□□□□□ -1.42
LYSMD3-202ENST00000453259 PRO2289Q9P1D8 64 aa6.14□□□□□ -1.43
LYSMD3-202ENST00000453259 H3BT86 120 aa6.12□□□□□ -1.43
LYSMD3-202ENST00000453259 Q8N9L7 120 aa6.12□□□□□ -1.43
LYSMD3-202ENST00000453259 NAA38Q9BRA0 125 aaKnown RBP6.12□□□□□ -1.43
LYSMD3-202ENST00000453259 TP53AIP1Q9HCN2 124 aa6.08□□□□□ -1.44
LYSMD3-202ENST00000453259 H0YAA0 97 aa6.06□□□□□ -1.44
LYSMD3-202ENST00000453259 LCE1AQ5T7P2 110 aa6.06□□□□□ -1.44
LYSMD3-202ENST00000453259 KRTAP8-1Q8IUC2 63 aa6.06□□□□□ -1.44
LYSMD3-202ENST00000453259 TSTD3H0UI37 97 aa6.04□□□□□ -1.44
LYSMD3-202ENST00000453259 KRTAP12-2P59991 146 aa6.01□□□□□ -1.45
LYSMD3-202ENST00000453259 SPRR2DP22532 72 aa6□□□□□ -1.45
LYSMD3-202ENST00000453259 UBL5Q9BZL1 73 aa6□□□□□ -1.45
LYSMD3-202ENST00000453259 MT1XP80297 61 aa5.99□□□□□ -1.45
LYSMD3-202ENST00000453259 A8MUN3 132 aa5.97□□□□□ -1.45
LYSMD3-202ENST00000453259 CYP4F30PQ9H0H9 118 aa5.96□□□□□ -1.46
LYSMD3-202ENST00000453259 NDUFC1O43677 76 aa5.95□□□□□ -1.46
LYSMD3-202ENST00000453259 PLAC4Q8WY50 150 aa5.95□□□□□ -1.46
LYSMD3-202ENST00000453259 A0A087WVE0 104 aa5.91□□□□□ -1.46
LYSMD3-202ENST00000453259 A0A1W2PPM0 123 aa5.91□□□□□ -1.46
LYSMD3-202ENST00000453259 LOC101927531A0A1B0GV80 90 aa5.9□□□□□ -1.46
LYSMD3-202ENST00000453259 TRAV22A0A0B4J277 110 aa5.86□□□□□ -1.47
LYSMD3-202ENST00000453259 ADM2Q7Z4H4 148 aa5.86□□□□□ -1.47
LYSMD3-202ENST00000453259 BATFQ16520 125 aa5.85□□□□□ -1.47
LYSMD3-202ENST00000453259 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
LYSMD3-202ENST00000453259 TAX1BP3O14907 124 aa5.82□□□□□ -1.48
LYSMD3-202ENST00000453259 TMA7Q9Y2S6 64 aaKnown RBP5.82□□□□□ -1.48
LYSMD3-202ENST00000453259 R4GN34 69 aa5.81□□□□□ -1.48
LYSMD3-202ENST00000453259 ACYP1P07311 99 aa5.8□□□□□ -1.48
LYSMD3-202ENST00000453259 SMIM6P0DI80 62 aa5.8□□□□□ -1.48
LYSMD3-202ENST00000453259 C20orf197Q8N268 126 aa5.8□□□□□ -1.48
LYSMD3-202ENST00000453259 SPCS1Q9Y6A9 102 aa5.78□□□□□ -1.48
LYSMD3-202ENST00000453259 ATOX1O00244 68 aa5.77□□□□□ -1.49
LYSMD3-202ENST00000453259 GPR98Q8WXG9 6306 aa5.76□□□□□ -1.49
LYSMD3-202ENST00000453259 K7EP34 96 aa5.75□□□□□ -1.49
LYSMD3-202ENST00000453259 KRTAP10-12P60413 245 aa5.73□□□□□ -1.49
LYSMD3-202ENST00000453259 M0QZ58 72 aa5.7□□□□□ -1.5
LYSMD3-202ENST00000453259 UQCRQO14949 82 aa5.7□□□□□ -1.5
LYSMD3-202ENST00000453259 PRO0461Q9UI25 63 aa5.7□□□□□ -1.5
LYSMD3-202ENST00000453259 H0Y9P7 68 aa5.67□□□□□ -1.5
LYSMD3-202ENST00000453259 KRTAP10-7P60409 375 aaPredicted RBP5.67□□□□□ -1.5
LYSMD3-202ENST00000453259 P0C880 135 aa5.65□□□□□ -1.5
LYSMD3-202ENST00000453259 LINC01554Q52M75 96 aa5.6□□□□□ -1.51
LYSMD3-202ENST00000453259 ATP5EP2Q5VTU8 51 aa5.59□□□□□ -1.51
LYSMD3-202ENST00000453259 DSTQ03001 7570 aaKnown RBP5.59□□□□□ -1.52
LYSMD3-202ENST00000453259 F8W1H4 67 aa5.55□□□□□ -1.52
LYSMD3-202ENST00000453259 KRTAP15-1Q3LI76 137 aa5.55□□□□□ -1.52
LYSMD3-202ENST00000453259 COL5A1-AS1Q5SY13 56 aa5.55□□□□□ -1.52
LYSMD3-202ENST00000453259 LINC00208Q96KT6 92 aa5.54□□□□□ -1.52
LYSMD3-202ENST00000453259 GTF2H5Q6ZYL4 71 aa5.52□□□□□ -1.53
LYSMD3-202ENST00000453259 MP68P56378 58 aa5.51□□□□□ -1.53
LYSMD3-202ENST00000453259 HIST1H4AP62805 103 aaKnown RBP5.51□□□□□ -1.53
LYSMD3-202ENST00000453259 ETDBQ3ZM63 59 aa5.51□□□□□ -1.53
LYSMD3-202ENST00000453259 FAM240AA0A1B0GVK7 77 aa5.47□□□□□ -1.53
LYSMD3-202ENST00000453259 MT-ATP8P03928 68 aa5.47□□□□□ -1.53
LYSMD3-202ENST00000453259 DMAC1Q96GE9 116 aa5.47□□□□□ -1.53
LYSMD3-202ENST00000453259 H3BPC8 53 aa5.41□□□□□ -1.54
LYSMD3-202ENST00000453259 OCR1Q9BZK8 76 aa5.41□□□□□ -1.54
LYSMD3-202ENST00000453259 KRTAP19-3Q7Z4W3 81 aa5.4□□□□□ -1.54
LYSMD3-202ENST00000453259 TRAV7A0A075B6U4 112 aa5.39□□□□□ -1.55
LYSMD3-202ENST00000453259 KRTAP19-7Q3SYF9 63 aa5.36□□□□□ -1.55
LYSMD3-202ENST00000453259 KRTAP5-3Q6L8H2 238 aa5.36□□□□□ -1.55
LYSMD3-202ENST00000453259 MT1EP04732 61 aa5.35□□□□□ -1.55
LYSMD3-202ENST00000453259 SPTSSBQ8NFR3 76 aa5.35□□□□□ -1.55
LYSMD3-202ENST00000453259 LOC105371267A0A1B0GV96 52 aa5.34□□□□□ -1.55
LYSMD3-202ENST00000453259 LINC00643Q86TS7 51 aa5.33□□□□□ -1.56
LYSMD3-202ENST00000453259 CYSTM1Q9H1C7 97 aa5.31□□□□□ -1.56
LYSMD3-202ENST00000453259 HMCN1Q96RW7 5635 aa5.28□□□□□ -1.56
LYSMD3-202ENST00000453259 ACYP2P14621 99 aa5.27□□□□□ -1.57
LYSMD3-202ENST00000453259 CAMK2N1Q7Z7J9 78 aa5.27□□□□□ -1.57
LYSMD3-202ENST00000453259 MT1GP13640 62 aa5.26□□□□□ -1.57
LYSMD3-202ENST00000453259 PP632Q6XCG6 107 aa5.26□□□□□ -1.57
LYSMD3-202ENST00000453259 MT4P47944 62 aa5.22□□□□□ -1.57
LYSMD3-202ENST00000453259 KRTAP5-10Q6L8G5 202 aa5.21□□□□□ -1.58
LYSMD3-202ENST00000453259 AHNAK2Q8IVF2 5795 aa5.19□□□□□ -1.58
LYSMD3-202ENST00000453259 CHKB-CPT1BH3BT56 60 aa5.15□□□□□ -1.59
LYSMD3-202ENST00000453259 SCGB1A1P11684 91 aa5.14□□□□□ -1.59
LYSMD3-202ENST00000453259 KRTAP5-4Q6L8H1 288 aa5.14□□□□□ -1.59
LYSMD3-202ENST00000453259 MT1MQ8N339 61 aa5.11□□□□□ -1.59
LYSMD3-202ENST00000453259 A0A0D9SG42 100 aa5.1□□□□□ -1.59
LYSMD3-202ENST00000453259 KRTAP19-5Q3LI72 72 aa5.1□□□□□ -1.59
LYSMD3-202ENST00000453259 KRTAP13-4Q3LI77 160 aa5.1□□□□□ -1.59
LYSMD3-202ENST00000453259 KRTAP5-7Q6L8G8 165 aa5.09□□□□□ -1.59
LYSMD3-202ENST00000453259 PCP4L1A6NKN8 68 aa5.05□□□□□ -1.6
LYSMD3-202ENST00000453259 MT1LQ93083 61 aa5.04□□□□□ -1.6
LYSMD3-202ENST00000453259 SMIM20Q8N5G0 67 aa4.98□□□□□ -1.61
LYSMD3-202ENST00000453259 J3QR89 54 aa4.94□□□□□ -1.62
LYSMD3-202ENST00000453259 SPANXA2-OT1Q8N9U9 137 aa4.92□□□□□ -1.62
LYSMD3-202ENST00000453259 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
LYSMD3-202ENST00000453259 SEC61GP60059 68 aa4.89□□□□□ -1.63
LYSMD3-202ENST00000453259 SPINT4Q6UDR6 99 aa4.88□□□□□ -1.63
LYSMD3-202ENST00000453259 SPRR5A0A1B0GTR4 108 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms