RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 CHD8Q9HCK8 2581 aa1.08□□□□□ -2.24
VPS8-211ENST00000452140 DNAH3Q8TD57 4116 aa1.08□□□□□ -2.24
VPS8-211ENST00000452140 CEP295Q9C0D2 2601 aa1.08□□□□□ -2.24
VPS8-211ENST00000452140 CSMD3Q7Z407 3707 aa1.08□□□□□ -2.24
VPS8-211ENST00000452140 MYCBP2O75592 4640 aa1.08□□□□□ -2.24
VPS8-211ENST00000452140 CSMD2Q7Z408 3487 aa1.08□□□□□ -2.24
VPS8-211ENST00000452140 HECTD1Q9ULT8 2610 aa1.07□□□□□ -2.24
VPS8-211ENST00000452140 HUWE1Q7Z6Z7 4374 aaKnown RBP1.07□□□□□ -2.24
VPS8-211ENST00000452140 H1FX-AS1Q4G0G2 97 aa1.07□□□□□ -2.24
VPS8-211ENST00000452140 LYSTQ99698 3801 aa1.07□□□□□ -2.24
VPS8-211ENST00000452140 CFAP46Q8IYW2 2715 aa1.07□□□□□ -2.24
VPS8-211ENST00000452140 LRRK2Q5S007 2527 aa1.07□□□□□ -2.24
VPS8-211ENST00000452140 FBN2P35556 2912 aa1.06□□□□□ -2.24
VPS8-211ENST00000452140 HECTD4Q9Y4D8 3996 aa1.06□□□□□ -2.24
VPS8-211ENST00000452140 UTP20O75691 2785 aaKnown RBP1.06□□□□□ -2.24
VPS8-211ENST00000452140 SPINK1P00995 79 aa1.06□□□□□ -2.24
VPS8-211ENST00000452140 HTN3P15516 51 aa1.06□□□□□ -2.24
VPS8-211ENST00000452140 RPL37P61927 97 aaKnown RBP1.06□□□□□ -2.24
VPS8-211ENST00000452140 SETD2Q9BYW2 2564 aaPredicted RBP1.06□□□□□ -2.24
VPS8-211ENST00000452140 HELZ2Q9BYK8 2649 aaKnown RBP1.06□□□□□ -2.24
VPS8-211ENST00000452140 APOBP04114 4563 aaKnown RBP1.06□□□□□ -2.24
VPS8-211ENST00000452140 ZANQ9Y493 2812 aa1.06□□□□□ -2.24
VPS8-211ENST00000452140 EPG5Q9HCE0 2579 aa1.05□□□□□ -2.24
VPS8-211ENST00000452140 HIVEP1P15822 2718 aa1.05□□□□□ -2.24
VPS8-211ENST00000452140 MEGF8Q7Z7M0 2845 aa1.05□□□□□ -2.24
VPS8-211ENST00000452140 DMBT1Q9UGM3 2413 aaPredicted RBP1.05□□□□□ -2.24
VPS8-211ENST00000452140 ACACBO00763 2458 aa1.05□□□□□ -2.24
VPS8-211ENST00000452140 DEFB124Q8NES8 71 aa1.05□□□□□ -2.24
VPS8-211ENST00000452140 CENPEQ02224 2701 aa1.05□□□□□ -2.24
VPS8-211ENST00000452140 NIPBLQ6KC79 2804 aaeCLIP1.05□□□□□ -2.24
VPS8-211ENST00000452140 USP9YO00507 2555 aaPredicted RBP1.04□□□□□ -2.24
VPS8-211ENST00000452140 PDZD2O15018 2839 aa1.04□□□□□ -2.24
VPS8-211ENST00000452140 CACNA1AO00555 2505 aa1.04□□□□□ -2.24
VPS8-211ENST00000452140 PIEZO1Q92508 2521 aa1.04□□□□□ -2.24
VPS8-211ENST00000452140 MXRA5Q9NR99 2828 aa1.04□□□□□ -2.24
VPS8-211ENST00000452140 PKD1L1Q8TDX9 2849 aa1.03□□□□□ -2.24
VPS8-211ENST00000452140 DEFB135Q30KP9 77 aa1.03□□□□□ -2.24
VPS8-211ENST00000452140 SPINK6Q6UWN8 80 aa1.03□□□□□ -2.24
VPS8-211ENST00000452140 COX6B2Q6YFQ2 88 aa1.03□□□□□ -2.24
VPS8-211ENST00000452140 TENM3Q9P273 2699 aa1.03□□□□□ -2.24
VPS8-211ENST00000452140 VWFP04275 2813 aa1.03□□□□□ -2.24
VPS8-211ENST00000452140 DNAH5Q8TE73 4624 aa1.03□□□□□ -2.25
VPS8-211ENST00000452140 PLECQ15149 4684 aaKnown RBP1.03□□□□□ -2.25
VPS8-211ENST00000452140 COL6A5A8TX70 2615 aa1.02□□□□□ -2.25
VPS8-211ENST00000452140 POLQO75417 2590 aa1.02□□□□□ -2.25
VPS8-211ENST00000452140 LINC01556Q5JQF7 62 aa1.02□□□□□ -2.25
VPS8-211ENST00000452140 NBEAL1Q6ZS30 2694 aa1.02□□□□□ -2.25
VPS8-211ENST00000452140 ABCA12Q86UK0 2595 aa1.01□□□□□ -2.25
VPS8-211ENST00000452140 STAB2Q8WWQ8 2551 aa1.01□□□□□ -2.25
VPS8-211ENST00000452140 A0A0D9SG42 100 aa1.01□□□□□ -2.25
VPS8-211ENST00000452140 FAM208BQ5VWN6 2430 aa1.01□□□□□ -2.25
VPS8-211ENST00000452140 PKHD1L1Q86WI1 4243 aa1.01□□□□□ -2.25
VPS8-211ENST00000452140 ZNF469Q96JG9 3925 aaPredicted RBP1□□□□□ -2.25
VPS8-211ENST00000452140 TGP01266 2768 aa1□□□□□ -2.25
VPS8-211ENST00000452140 NOTCH1P46531 2555 aa1□□□□□ -2.25
VPS8-211ENST00000452140 KMT2AQ03164 3969 aa0.99□□□□□ -2.25
VPS8-211ENST00000452140 ACANP16112 2415 aa0.99□□□□□ -2.25
VPS8-211ENST00000452140 SPART-AS1P0CW21 52 aa0.99□□□□□ -2.25
VPS8-211ENST00000452140 S4R3F8 94 aa0.99□□□□□ -2.25
VPS8-211ENST00000452140 TENM1Q9UKZ4 2725 aa0.99□□□□□ -2.25
VPS8-211ENST00000452140 LRP1Q07954 4544 aaKnown RBP0.99□□□□□ -2.25
VPS8-211ENST00000452140 ATRQ13535 2644 aa0.99□□□□□ -2.25
VPS8-211ENST00000452140 VPS13BQ7Z7G8 4022 aa0.99□□□□□ -2.25
VPS8-211ENST00000452140 FASNP49327 2511 aaKnown RBP0.98□□□□□ -2.25
VPS8-211ENST00000452140 DYNC1H1Q14204 4646 aaKnown RBP0.98□□□□□ -2.25
VPS8-211ENST00000452140 COL7A1Q02388 2944 aa0.98□□□□□ -2.25
VPS8-211ENST00000452140 UBE2DNLQ8IWF7 75 aa0.98□□□□□ -2.25
VPS8-211ENST00000452140 TENM4Q6N022 2769 aa0.98□□□□□ -2.25
VPS8-211ENST00000452140 FAT3Q8TDW7 4589 aa0.98□□□□□ -2.25
VPS8-211ENST00000452140 ITPR2Q14571 2701 aa0.98□□□□□ -2.25
VPS8-211ENST00000452140 NSD1Q96L73 2696 aaPredicted RBP0.98□□□□□ -2.25
VPS8-211ENST00000452140 PKD1P98161 4303 aa0.97□□□□□ -2.25
VPS8-211ENST00000452140 FAT2Q9NYQ8 4349 aa0.97□□□□□ -2.25
VPS8-211ENST00000452140 ITPR3Q14573 2671 aa0.97□□□□□ -2.25
VPS8-211ENST00000452140 TNXBP22105 4242 aa0.97□□□□□ -2.25
VPS8-211ENST00000452140 BDP1A6H8Y1 2624 aa0.97□□□□□ -2.25
VPS8-211ENST00000452140 FLNAP21333 2647 aaKnown RBP0.97□□□□□ -2.25
VPS8-211ENST00000452140 MYO18BQ8IUG5 2567 aa0.97□□□□□ -2.25
VPS8-211ENST00000452140 H3BNG1 76 aa0.97□□□□□ -2.25
VPS8-211ENST00000452140 APLNQ9ULZ1 77 aa0.97□□□□□ -2.25
VPS8-211ENST00000452140 ZNF292O60281 2723 aa0.96□□□□□ -2.26
VPS8-211ENST00000452140 HSPG2P98160 4391 aa0.96□□□□□ -2.26
VPS8-211ENST00000452140 LRP1BQ9NZR2 4599 aa0.96□□□□□ -2.26
VPS8-211ENST00000452140 PKHD1P08F94 4074 aa0.95□□□□□ -2.26
VPS8-211ENST00000452140 TEP1Q99973 2627 aaKnown RBP0.95□□□□□ -2.26
VPS8-211ENST00000452140 FLNBO75369 2602 aaKnown RBP0.94□□□□□ -2.26
VPS8-211ENST00000452140 FAT1Q14517 4588 aa0.94□□□□□ -2.26
VPS8-211ENST00000452140 FLGP20930 4061 aaPredicted RBP0.94□□□□□ -2.26
VPS8-211ENST00000452140 STARD9Q9P2P6 4700 aa0.94□□□□□ -2.26
VPS8-211ENST00000452140 FLNCQ14315 2725 aa0.94□□□□□ -2.26
VPS8-211ENST00000452140 MGAM2Q2M2H8 2515 aa0.93□□□□□ -2.26
VPS8-211ENST00000452140 USP24Q9UPU5 2620 aa0.92□□□□□ -2.26
VPS8-211ENST00000452140 DEFB123Q8N688 67 aa0.92□□□□□ -2.26
VPS8-211ENST00000452140 MAST4O15021 2626 aa0.92□□□□□ -2.26
VPS8-211ENST00000452140 IGSF10Q6WRI0 2623 aa0.92□□□□□ -2.26
VPS8-211ENST00000452140 STAB1Q9NY15 2570 aa0.91□□□□□ -2.26
VPS8-211ENST00000452140 C9orf92A6NGG3 77 aa0.9□□□□□ -2.27
VPS8-211ENST00000452140 HERC1Q15751 4861 aa0.89□□□□□ -2.27
VPS8-211ENST00000452140 SMR3AQ99954 134 aa0.87□□□□□ -2.27
VPS8-211ENST00000452140 MUC17Q685J3 4493 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms