RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 LYSTQ99698 3801 aa5.47□□□□□ -1.53
ZNF550-204ENST00000447310 LRP1BQ9NZR2 4599 aa5.45□□□□□ -1.54
ZNF550-204ENST00000447310 TNP1P09430 55 aa5.45□□□□□ -1.54
ZNF550-204ENST00000447310 DNAH5Q8TE73 4624 aa5.44□□□□□ -1.54
ZNF550-204ENST00000447310 PP632Q6XCG6 107 aa5.43□□□□□ -1.54
ZNF550-204ENST00000447310 KRTAP10-4P60372 401 aaPredicted RBP5.42□□□□□ -1.54
ZNF550-204ENST00000447310 DNAH2Q9P225 4427 aa5.41□□□□□ -1.54
ZNF550-204ENST00000447310 KMT2AQ03164 3969 aa5.4□□□□□ -1.54
ZNF550-204ENST00000447310 FRAS1Q86XX4 4008 aa5.39□□□□□ -1.55
ZNF550-204ENST00000447310 DNAH3Q8TD57 4116 aa5.37□□□□□ -1.55
ZNF550-204ENST00000447310 PRKDCP78527 4128 aaKnown RBP5.37□□□□□ -1.55
ZNF550-204ENST00000447310 FAT1Q14517 4588 aa5.37□□□□□ -1.55
ZNF550-204ENST00000447310 ALMS1Q8TCU4 4167 aa5.36□□□□□ -1.55
ZNF550-204ENST00000447310 KRTAP15-1Q3LI76 137 aa5.34□□□□□ -1.56
ZNF550-204ENST00000447310 CMYA5Q8N3K9 4069 aa5.32□□□□□ -1.56
ZNF550-204ENST00000447310 DNAH7Q8WXX0 4024 aa5.32□□□□□ -1.56
ZNF550-204ENST00000447310 MT1HL1P0DM35 61 aa5.28□□□□□ -1.56
ZNF550-204ENST00000447310 VPS13BQ7Z7G8 4022 aa5.26□□□□□ -1.57
ZNF550-204ENST00000447310 HECTD4Q9Y4D8 3996 aa5.25□□□□□ -1.57
ZNF550-204ENST00000447310 DNAH6Q9C0G6 4158 aa5.25□□□□□ -1.57
ZNF550-204ENST00000447310 DYNC1H1Q14204 4646 aaKnown RBP5.25□□□□□ -1.57
ZNF550-204ENST00000447310 DYNC2H1Q8NCM8 4307 aaKnown RBP5.21□□□□□ -1.58
ZNF550-204ENST00000447310 MYCBP2O75592 4640 aa5.21□□□□□ -1.58
ZNF550-204ENST00000447310 KRTAP4-5Q9BYR2 181 aa5.17□□□□□ -1.58
ZNF550-204ENST00000447310 SACSQ9NZJ4 4579 aa5.16□□□□□ -1.58
ZNF550-204ENST00000447310 KRTAP10-10P60014 251 aa5.11□□□□□ -1.59
ZNF550-204ENST00000447310 LORP23490 312 aaPredicted RBP5.11□□□□□ -1.59
ZNF550-204ENST00000447310 APOBP04114 4563 aaKnown RBP5.05□□□□□ -1.6
ZNF550-204ENST00000447310 RYR1P21817 5038 aa5.04□□□□□ -1.6
ZNF550-204ENST00000447310 KIAA1109Q2LD37 5005 aa5.04□□□□□ -1.6
ZNF550-204ENST00000447310 FAT2Q9NYQ8 4349 aa5.04□□□□□ -1.6
ZNF550-204ENST00000447310 LRP1Q07954 4544 aaKnown RBP5.04□□□□□ -1.6
ZNF550-204ENST00000447310 HYDINQ4G0P3 5121 aa5□□□□□ -1.61
ZNF550-204ENST00000447310 FAT3Q8TDW7 4589 aa5□□□□□ -1.61
ZNF550-204ENST00000447310 PKHD1P08F94 4074 aa4.98□□□□□ -1.61
ZNF550-204ENST00000447310 RYR3Q15413 4870 aa4.89□□□□□ -1.63
ZNF550-204ENST00000447310 KRTAP4-1Q9BYQ7 146 aa4.88□□□□□ -1.63
ZNF550-204ENST00000447310 LRP2P98164 4655 aa4.84□□□□□ -1.63
ZNF550-204ENST00000447310 PKD1P98161 4303 aa4.83□□□□□ -1.64
ZNF550-204ENST00000447310 PRO2289Q9P1D8 64 aa4.81□□□□□ -1.64
ZNF550-204ENST00000447310 KRTAP17-1Q9BYP8 105 aa4.8□□□□□ -1.64
ZNF550-204ENST00000447310 KRTAP23-1A1A580 65 aa4.76□□□□□ -1.65
ZNF550-204ENST00000447310 HSPG2P98160 4391 aa4.75□□□□□ -1.65
ZNF550-204ENST00000447310 LCE3AQ5TA76 89 aa4.74□□□□□ -1.65
ZNF550-204ENST00000447310 KMT2CQ8NEZ4 4911 aaKnown RBP4.73□□□□□ -1.65
ZNF550-204ENST00000447310 RYR2Q92736 4967 aa4.71□□□□□ -1.65
ZNF550-204ENST00000447310 KRTAP10-12P60413 245 aa4.66□□□□□ -1.66
ZNF550-204ENST00000447310 KRTAP12-3P60328 96 aa4.64□□□□□ -1.67
ZNF550-204ENST00000447310 PKHD1L1Q86WI1 4243 aa4.62□□□□□ -1.67
ZNF550-204ENST00000447310 HERC2O95714 4834 aa4.62□□□□□ -1.67
ZNF550-204ENST00000447310 INE1O15225 51 aa4.61□□□□□ -1.67
ZNF550-204ENST00000447310 LPAP08519 4548 aa4.6□□□□□ -1.67
ZNF550-204ENST00000447310 TNXBP22105 4242 aa4.56□□□□□ -1.68
ZNF550-204ENST00000447310 SPRR2GQ9BYE4 73 aa4.54□□□□□ -1.68
ZNF550-204ENST00000447310 PCLOQ9Y6V0 5065 aa4.47□□□□□ -1.69
ZNF550-204ENST00000447310 EPPK1P58107 5090 aaKnown RBP4.46□□□□□ -1.69
ZNF550-204ENST00000447310 MT2AP02795 61 aa4.46□□□□□ -1.69
ZNF550-204ENST00000447310 MT1HP80294 61 aa4.46□□□□□ -1.7
ZNF550-204ENST00000447310 MT1FP04733 61 aa4.44□□□□□ -1.7
ZNF550-204ENST00000447310 KRTAP19-1Q8IUB9 90 aa4.44□□□□□ -1.7
ZNF550-204ENST00000447310 KRTAP8-1Q8IUC2 63 aa4.4□□□□□ -1.71
ZNF550-204ENST00000447310 SPRR5A0A1B0GTR4 108 aa4.37□□□□□ -1.71
ZNF550-204ENST00000447310 KRTAP19-2Q3LHN2 52 aa4.35□□□□□ -1.71
ZNF550-204ENST00000447310 MUC17Q685J3 4493 aa4.33□□□□□ -1.72
ZNF550-204ENST00000447310 MUC2Q02817 5179 aa4.33□□□□□ -1.72
ZNF550-204ENST00000447310 ABCA13Q86UQ4 5058 aa4.32□□□□□ -1.72
ZNF550-204ENST00000447310 CRCT1Q9UGL9 99 aa4.31□□□□□ -1.72
ZNF550-204ENST00000447310 RNF213Q63HN8 5207 aa4.29□□□□□ -1.72
ZNF550-204ENST00000447310 FSIP2Q5CZC0 6907 aa4.28□□□□□ -1.72
ZNF550-204ENST00000447310 LCE2CQ5TA81 110 aa4.26□□□□□ -1.73
ZNF550-204ENST00000447310 FLGP20930 4061 aaPredicted RBP4.26□□□□□ -1.73
ZNF550-204ENST00000447310 KRTAP10-7P60409 375 aaPredicted RBP4.25□□□□□ -1.73
ZNF550-204ENST00000447310 KRTAP19-8Q3LI54 63 aa4.25□□□□□ -1.73
ZNF550-204ENST00000447310 BIRC6Q9NR09 4857 aa4.24□□□□□ -1.73
ZNF550-204ENST00000447310 KRTAP19-5Q3LI72 72 aa4.24□□□□□ -1.73
ZNF550-204ENST00000447310 HERC1Q15751 4861 aa4.24□□□□□ -1.73
ZNF550-204ENST00000447310 MT1XP80297 61 aa4.22□□□□□ -1.73
ZNF550-204ENST00000447310 KRTAP10-5P60370 271 aa4.21□□□□□ -1.74
ZNF550-204ENST00000447310 MT1BP07438 61 aa4.2□□□□□ -1.74
ZNF550-204ENST00000447310 KRTAP9-8Q9BYQ0 159 aa4.19□□□□□ -1.74
ZNF550-204ENST00000447310 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
ZNF550-204ENST00000447310 FAT4Q6V0I7 4981 aa4.19□□□□□ -1.74
ZNF550-204ENST00000447310 UBR4Q5T4S7 5183 aa4.16□□□□□ -1.74
ZNF550-204ENST00000447310 HMCN2Q8NDA2 5059 aa4.05□□□□□ -1.76
ZNF550-204ENST00000447310 KRTAP9-3Q9BYQ3 159 aa4.03□□□□□ -1.76
ZNF550-204ENST00000447310 KRTAP4-8A0A0G2JLE6 195 aa4.02□□□□□ -1.77
ZNF550-204ENST00000447310 KRTAP4-8Q9BYQ9 185 aa4.02□□□□□ -1.77
ZNF550-204ENST00000447310 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
ZNF550-204ENST00000447310 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
ZNF550-204ENST00000447310 KRTAP4-7Q9BYR0 210 aa3.9□□□□□ -1.79
ZNF550-204ENST00000447310 LCE2BO14633 110 aa3.88□□□□□ -1.79
ZNF550-204ENST00000447310 SPRR2FQ96RM1 72 aa3.87□□□□□ -1.79
ZNF550-204ENST00000447310 KRTAP19-4Q3LI73 84 aa3.85□□□□□ -1.79
ZNF550-204ENST00000447310 USH2AO75445 5202 aa3.79□□□□□ -1.8
ZNF550-204ENST00000447310 MT1GP13640 62 aa3.78□□□□□ -1.8
ZNF550-204ENST00000447310 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
ZNF550-204ENST00000447310 MT1LQ93083 61 aa3.74□□□□□ -1.81
ZNF550-204ENST00000447310 DSTQ03001 7570 aaKnown RBP3.74□□□□□ -1.81
ZNF550-204ENST00000447310 MT1EP04732 61 aa3.7□□□□□ -1.82
ZNF550-204ENST00000447310 LCE3BQ5TA77 95 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms