RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 ORMDL1Q9P0S3 153 aa3.85□□□□□ -1.79
HDAC9-216ENST00000446646 hDV103S1A0JD37 113 aa3.84□□□□□ -1.79
HDAC9-216ENST00000446646 MDN1Q9NU22 5596 aa3.84□□□□□ -1.79
HDAC9-216ENST00000446646 KLKP1Q107X0 134 aa3.83□□□□□ -1.8
HDAC9-216ENST00000446646 PCOTHQ58A44 107 aa3.83□□□□□ -1.8
HDAC9-216ENST00000446646 CYP4F30PQ9H0H9 118 aa3.83□□□□□ -1.8
HDAC9-216ENST00000446646 H7BZZ5 65 aa3.82□□□□□ -1.8
HDAC9-216ENST00000446646 A6NED7 52 aa3.81□□□□□ -1.8
HDAC9-216ENST00000446646 BPY2O14599 106 aa3.81□□□□□ -1.8
HDAC9-216ENST00000446646 KRTAP10-7P60409 375 aaPredicted RBP3.81□□□□□ -1.8
HDAC9-216ENST00000446646 ATXN8Q156A1 80 aa3.81□□□□□ -1.8
HDAC9-216ENST00000446646 KRTAP6-3Q3LI67 103 aa3.81□□□□□ -1.8
HDAC9-216ENST00000446646 CYSTM1Q9H1C7 97 aa3.81□□□□□ -1.8
HDAC9-216ENST00000446646 IGFL1Q6UW32 110 aa3.79□□□□□ -1.8
HDAC9-216ENST00000446646 KMT2DO14686 5537 aa3.79□□□□□ -1.8
HDAC9-216ENST00000446646 A8MWP4 228 aa3.78□□□□□ -1.8
HDAC9-216ENST00000446646 CASC2Q6XLA1 102 aa3.78□□□□□ -1.8
HDAC9-216ENST00000446646 SPTSSBQ8NFR3 76 aa3.77□□□□□ -1.81
HDAC9-216ENST00000446646 JMJD7-PLA2G4BH0Y9G9 81 aa3.76□□□□□ -1.81
HDAC9-216ENST00000446646 KRTAP20-1Q3LI63 56 aa3.76□□□□□ -1.81
HDAC9-216ENST00000446646 CDC42SE1Q9NRR8 79 aa3.76□□□□□ -1.81
HDAC9-216ENST00000446646 TRAV7A0A075B6U4 112 aa3.75□□□□□ -1.81
HDAC9-216ENST00000446646 A0A1B0GVX0 72 aa3.75□□□□□ -1.81
HDAC9-216ENST00000446646 BAALC-AS2P0C853 105 aa3.75□□□□□ -1.81
HDAC9-216ENST00000446646 COX6B2Q6YFQ2 88 aa3.75□□□□□ -1.81
HDAC9-216ENST00000446646 C14orf132Q9NPU4 83 aa3.75□□□□□ -1.81
HDAC9-216ENST00000446646 A0A087WSZ3 146 aa3.74□□□□□ -1.81
HDAC9-216ENST00000446646 A0A0G2JQZ4 141 aa3.74□□□□□ -1.81
HDAC9-216ENST00000446646 TRBV7-4A0A0J9YYF1 115 aa3.74□□□□□ -1.81
HDAC9-216ENST00000446646 HCG22E2RYF7 251 aa3.74□□□□□ -1.81
HDAC9-216ENST00000446646 PDE6GP18545 87 aa3.74□□□□□ -1.81
HDAC9-216ENST00000446646 ATP5EP2Q5VTU8 51 aa3.74□□□□□ -1.81
HDAC9-216ENST00000446646 ADM2Q7Z4H4 148 aa3.74□□□□□ -1.81
HDAC9-216ENST00000446646 C20orf197Q8N268 126 aa3.74□□□□□ -1.81
HDAC9-216ENST00000446646 ROMO1P60602 79 aa3.73□□□□□ -1.81
HDAC9-216ENST00000446646 GPR98Q8WXG9 6306 aa3.72□□□□□ -1.81
HDAC9-216ENST00000446646 MT2AP02795 61 aa3.71□□□□□ -1.82
HDAC9-216ENST00000446646 MT1FP04733 61 aa3.71□□□□□ -1.82
HDAC9-216ENST00000446646 TRAV22A0A0B4J277 110 aa3.7□□□□□ -1.82
HDAC9-216ENST00000446646 KRTAP19-6Q3LI70 58 aa3.7□□□□□ -1.82
HDAC9-216ENST00000446646 A0A1W2PNM2 257 aa3.69□□□□□ -1.82
HDAC9-216ENST00000446646 C9orf92A6NGG3 77 aa3.69□□□□□ -1.82
HDAC9-216ENST00000446646 KRTAP5-11Q6L8G4 156 aa3.69□□□□□ -1.82
HDAC9-216ENST00000446646 C1orf64Q8NEQ6 169 aa3.69□□□□□ -1.82
HDAC9-216ENST00000446646 LOC110117498A0A087WWA1 95 aa3.68□□□□□ -1.82
HDAC9-216ENST00000446646 MT3P25713 68 aa3.68□□□□□ -1.82
HDAC9-216ENST00000446646 Q6ZQT0 140 aa3.68□□□□□ -1.82
HDAC9-216ENST00000446646 H3BPC8 53 aa3.67□□□□□ -1.82
HDAC9-216ENST00000446646 CHKB-CPT1BH3BT56 60 aa3.67□□□□□ -1.82
HDAC9-216ENST00000446646 IGKV4-1P06312 121 aa3.67□□□□□ -1.82
HDAC9-216ENST00000446646 Q5VV11 94 aa3.66□□□□□ -1.82
HDAC9-216ENST00000446646 TMEM254Q8TBM7 123 aa3.66□□□□□ -1.82
HDAC9-216ENST00000446646 NDUFB1O75438 58 aa3.65□□□□□ -1.83
HDAC9-216ENST00000446646 OBSCN-AS1Q96MR7 158 aa3.65□□□□□ -1.83
HDAC9-216ENST00000446646 RPL37P61927 97 aaKnown RBP3.64□□□□□ -1.83
HDAC9-216ENST00000446646 NREPQ16612 68 aa3.64□□□□□ -1.83
HDAC9-216ENST00000446646 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
HDAC9-216ENST00000446646 Q96NJ1 140 aa3.63□□□□□ -1.83
HDAC9-216ENST00000446646 MIR22HGQ0VDD5 57 aa3.62□□□□□ -1.83
HDAC9-216ENST00000446646 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
HDAC9-216ENST00000446646 LINC00472Q9H8W2 130 aa3.62□□□□□ -1.83
HDAC9-216ENST00000446646 A8MUU9 505 aa3.61□□□□□ -1.83
HDAC9-216ENST00000446646 DEFB116Q30KQ4 102 aa3.61□□□□□ -1.83
HDAC9-216ENST00000446646 DSCR10P59022 87 aa3.6□□□□□ -1.83
HDAC9-216ENST00000446646 C20orf166-AS1Q96NR2 134 aa3.6□□□□□ -1.83
HDAC9-216ENST00000446646 UBL5Q9BZL1 73 aa3.6□□□□□ -1.83
HDAC9-216ENST00000446646 LOC101927531A0A1B0GV80 90 aa3.59□□□□□ -1.83
HDAC9-216ENST00000446646 KRTAP10-10P60014 251 aa3.59□□□□□ -1.83
HDAC9-216ENST00000446646 SPANXA2-OT1Q8N9U9 137 aa3.57□□□□□ -1.84
HDAC9-216ENST00000446646 LINC00846Q9NV44 126 aa3.55□□□□□ -1.84
HDAC9-216ENST00000446646 IGKV3D-7A0A0C4DH55 119 aa3.53□□□□□ -1.84
HDAC9-216ENST00000446646 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
HDAC9-216ENST00000446646 PRR15LQ9BU68 103 aa3.53□□□□□ -1.84
HDAC9-216ENST00000446646 K7EQZ3 153 aa3.52□□□□□ -1.85
HDAC9-216ENST00000446646 DMAC1Q96GE9 116 aa3.52□□□□□ -1.85
HDAC9-216ENST00000446646 MRPL34Q9BQ48 92 aaKnown RBP3.52□□□□□ -1.85
HDAC9-216ENST00000446646 SNURFQ9Y675 71 aa3.52□□□□□ -1.85
HDAC9-216ENST00000446646 KRTAP2-3P0C7H8 128 aa3.51□□□□□ -1.85
HDAC9-216ENST00000446646 KRTAP2-4Q9BYR9 128 aa3.51□□□□□ -1.85
HDAC9-216ENST00000446646 MMP24-AS1A0A0U1RRL7 71 aa3.5□□□□□ -1.85
HDAC9-216ENST00000446646 A8MU10 97 aa3.5□□□□□ -1.85
HDAC9-216ENST00000446646 CSAG1Q6PB30 78 aa3.5□□□□□ -1.85
HDAC9-216ENST00000446646 ZCCHC13Q8WW36 166 aaKnown RBP3.5□□□□□ -1.85
HDAC9-216ENST00000446646 A0A1B0GU33 70 aa3.49□□□□□ -1.85
HDAC9-216ENST00000446646 A0A087WVE0 104 aa3.48□□□□□ -1.85
HDAC9-216ENST00000446646 P0C880 135 aa3.48□□□□□ -1.85
HDAC9-216ENST00000446646 WFDC13Q8IUB5 93 aa3.48□□□□□ -1.85
HDAC9-216ENST00000446646 Q8N9L7 120 aa3.46□□□□□ -1.86
HDAC9-216ENST00000446646 KRTAP5-9P26371 169 aa3.45□□□□□ -1.86
HDAC9-216ENST00000446646 Q5W150 140 aa3.45□□□□□ -1.86
HDAC9-216ENST00000446646 TP53AIP1Q9HCN2 124 aa3.44□□□□□ -1.86
HDAC9-216ENST00000446646 SPINK7P58062 85 aa3.43□□□□□ -1.86
HDAC9-216ENST00000446646 KRTAP25-1Q3LHN0 102 aa3.43□□□□□ -1.86
HDAC9-216ENST00000446646 LINC01558Q9Y6Z2 57 aa3.41□□□□□ -1.86
HDAC9-216ENST00000446646 UQCR11O14957 56 aa3.39□□□□□ -1.87
HDAC9-216ENST00000446646 HRES1P13985 223 aa3.39□□□□□ -1.87
HDAC9-216ENST00000446646 LINC00208Q96KT6 92 aa3.39□□□□□ -1.87
HDAC9-216ENST00000446646 KRTAP10-5P60370 271 aa3.38□□□□□ -1.87
HDAC9-216ENST00000446646 H0Y9P7 68 aa3.37□□□□□ -1.87
HDAC9-216ENST00000446646 KRTAP2-1Q9BYU5 128 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms