RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 KRTAP12-3P60328 96 aa8.09□□□□□ -1.11
SHANK3-203ENST00000445220 DNAH9Q9NYC9 4486 aa8□□□□□ -1.13
SHANK3-203ENST00000445220 LCE3AQ5TA76 89 aa7.98□□□□□ -1.13
SHANK3-203ENST00000445220 CRCT1Q9UGL9 99 aa7.87□□□□□ -1.15
SHANK3-203ENST00000445220 LORP23490 312 aaPredicted RBP7.84□□□□□ -1.15
SHANK3-203ENST00000445220 DNAH11Q96DT5 4516 aa7.83□□□□□ -1.16
SHANK3-203ENST00000445220 DNAH5Q8TE73 4624 aa7.81□□□□□ -1.16
SHANK3-203ENST00000445220 PLECQ15149 4684 aaKnown RBP7.77□□□□□ -1.16
SHANK3-203ENST00000445220 CSMD3Q7Z407 3707 aa7.77□□□□□ -1.17
SHANK3-203ENST00000445220 DNAH1Q9P2D7 4330 aa7.76□□□□□ -1.17
SHANK3-203ENST00000445220 KRTAP17-1Q9BYP8 105 aa7.74□□□□□ -1.17
SHANK3-203ENST00000445220 RYR1P21817 5038 aa7.67□□□□□ -1.18
SHANK3-203ENST00000445220 VPS13DQ5THJ4 4388 aa7.66□□□□□ -1.18
SHANK3-203ENST00000445220 BIRC6Q9NR09 4857 aa7.62□□□□□ -1.19
SHANK3-203ENST00000445220 DNAH17Q9UFH2 4485 aa7.59□□□□□ -1.19
SHANK3-203ENST00000445220 DNAH10Q8IVF4 4471 aa7.59□□□□□ -1.19
SHANK3-203ENST00000445220 KRTAP10-5P60370 271 aa7.58□□□□□ -1.2
SHANK3-203ENST00000445220 DYNC1H1Q14204 4646 aaKnown RBP7.54□□□□□ -1.2
SHANK3-203ENST00000445220 PRKDCP78527 4128 aaKnown RBP7.53□□□□□ -1.2
SHANK3-203ENST00000445220 DNAH2Q9P225 4427 aa7.51□□□□□ -1.21
SHANK3-203ENST00000445220 STARD9Q9P2P6 4700 aa7.51□□□□□ -1.21
SHANK3-203ENST00000445220 KIAA1109Q2LD37 5005 aa7.49□□□□□ -1.21
SHANK3-203ENST00000445220 RYR3Q15413 4870 aa7.47□□□□□ -1.21
SHANK3-203ENST00000445220 ANK2Q01484 3957 aa7.47□□□□□ -1.21
SHANK3-203ENST00000445220 KRTAP4-1Q9BYQ7 146 aa7.45□□□□□ -1.22
SHANK3-203ENST00000445220 MT1HP80294 61 aa7.43□□□□□ -1.22
SHANK3-203ENST00000445220 DNAH3Q8TD57 4116 aa7.41□□□□□ -1.22
SHANK3-203ENST00000445220 LRP1BQ9NZR2 4599 aa7.38□□□□□ -1.23
SHANK3-203ENST00000445220 SPRR2GQ9BYE4 73 aa7.32□□□□□ -1.24
SHANK3-203ENST00000445220 FAT1Q14517 4588 aa7.32□□□□□ -1.24
SHANK3-203ENST00000445220 KRTAP8-1Q8IUC2 63 aa7.32□□□□□ -1.24
SHANK3-203ENST00000445220 DYNC2H1Q8NCM8 4307 aaKnown RBP7.3□□□□□ -1.24
SHANK3-203ENST00000445220 DNAH8Q96JB1 4490 aa7.28□□□□□ -1.24
SHANK3-203ENST00000445220 MT2AP02795 61 aa7.28□□□□□ -1.24
SHANK3-203ENST00000445220 HERC2O95714 4834 aa7.27□□□□□ -1.25
SHANK3-203ENST00000445220 FAT2Q9NYQ8 4349 aa7.24□□□□□ -1.25
SHANK3-203ENST00000445220 SACSQ9NZJ4 4579 aa7.23□□□□□ -1.25
SHANK3-203ENST00000445220 RYR2Q92736 4967 aa7.21□□□□□ -1.26
SHANK3-203ENST00000445220 KMT2AQ03164 3969 aa7.2□□□□□ -1.26
SHANK3-203ENST00000445220 CMYA5Q8N3K9 4069 aa7.19□□□□□ -1.26
SHANK3-203ENST00000445220 MT1FP04733 61 aa7.1□□□□□ -1.27
SHANK3-203ENST00000445220 LCE3CQ5T5A8 94 aa7.08□□□□□ -1.28
SHANK3-203ENST00000445220 VPS13BQ7Z7G8 4022 aa7.04□□□□□ -1.28
SHANK3-203ENST00000445220 PCLOQ9Y6V0 5065 aa7.03□□□□□ -1.28
SHANK3-203ENST00000445220 DNAH6Q9C0G6 4158 aa7.03□□□□□ -1.28
SHANK3-203ENST00000445220 HYDINQ4G0P3 5121 aa7.01□□□□□ -1.29
SHANK3-203ENST00000445220 KRTAP19-5Q3LI72 72 aa7.01□□□□□ -1.29
SHANK3-203ENST00000445220 KRTAP19-4Q3LI73 84 aa6.97□□□□□ -1.29
SHANK3-203ENST00000445220 SPRR2FQ96RM1 72 aa6.97□□□□□ -1.29
SHANK3-203ENST00000445220 APOBP04114 4563 aaKnown RBP6.96□□□□□ -1.3
SHANK3-203ENST00000445220 LYSTQ99698 3801 aa6.95□□□□□ -1.3
SHANK3-203ENST00000445220 DNAH7Q8WXX0 4024 aa6.92□□□□□ -1.3
SHANK3-203ENST00000445220 HECTD4Q9Y4D8 3996 aa6.91□□□□□ -1.3
SHANK3-203ENST00000445220 KRTAP9-2Q9BYQ4 174 aa6.9□□□□□ -1.3
SHANK3-203ENST00000445220 FRAS1Q86XX4 4008 aa6.88□□□□□ -1.31
SHANK3-203ENST00000445220 KRTAP19-8Q3LI54 63 aa6.85□□□□□ -1.31
SHANK3-203ENST00000445220 SPRR5A0A1B0GTR4 108 aa6.83□□□□□ -1.32
SHANK3-203ENST00000445220 HERC1Q15751 4861 aa6.82□□□□□ -1.32
SHANK3-203ENST00000445220 MYCBP2O75592 4640 aa6.78□□□□□ -1.32
SHANK3-203ENST00000445220 KRTAP19-1Q8IUB9 90 aa6.78□□□□□ -1.32
SHANK3-203ENST00000445220 KRTAP9-6A0A140TA67 174 aa6.78□□□□□ -1.32
SHANK3-203ENST00000445220 FAT3Q8TDW7 4589 aa6.78□□□□□ -1.32
SHANK3-203ENST00000445220 KMT2CQ8NEZ4 4911 aaKnown RBP6.77□□□□□ -1.32
SHANK3-203ENST00000445220 LRP1Q07954 4544 aaKnown RBP6.74□□□□□ -1.33
SHANK3-203ENST00000445220 KRTAP10-7P60409 375 aaPredicted RBP6.74□□□□□ -1.33
SHANK3-203ENST00000445220 SPRR2EP22531 72 aa6.71□□□□□ -1.34
SHANK3-203ENST00000445220 SPRR2BP35325 72 aa6.71□□□□□ -1.34
SHANK3-203ENST00000445220 SPRR2AP35326 72 aa6.71□□□□□ -1.34
SHANK3-203ENST00000445220 HSPG2P98160 4391 aa6.69□□□□□ -1.34
SHANK3-203ENST00000445220 EPPK1P58107 5090 aaKnown RBP6.68□□□□□ -1.34
SHANK3-203ENST00000445220 ABCA13Q86UQ4 5058 aa6.64□□□□□ -1.35
SHANK3-203ENST00000445220 KRTAP12-4P60329 112 aa6.64□□□□□ -1.35
SHANK3-203ENST00000445220 PKHD1L1Q86WI1 4243 aa6.61□□□□□ -1.35
SHANK3-203ENST00000445220 MT1XP80297 61 aa6.58□□□□□ -1.36
SHANK3-203ENST00000445220 LRP2P98164 4655 aa6.55□□□□□ -1.36
SHANK3-203ENST00000445220 PKHD1P08F94 4074 aa6.55□□□□□ -1.36
SHANK3-203ENST00000445220 MT1BP07438 61 aa6.54□□□□□ -1.36
SHANK3-203ENST00000445220 SPRR2DP22532 72 aa6.51□□□□□ -1.37
SHANK3-203ENST00000445220 KRTAP9-8Q9BYQ0 159 aa6.51□□□□□ -1.37
SHANK3-203ENST00000445220 PKD1P98161 4303 aa6.51□□□□□ -1.37
SHANK3-203ENST00000445220 UBR4Q5T4S7 5183 aa6.48□□□□□ -1.37
SHANK3-203ENST00000445220 LCE2CQ5TA81 110 aa6.48□□□□□ -1.37
SHANK3-203ENST00000445220 LCE3BQ5TA77 95 aa6.46□□□□□ -1.37
SHANK3-203ENST00000445220 LCE2DQ5TA82 110 aaPredicted RBP6.45□□□□□ -1.38
SHANK3-203ENST00000445220 KRTAP9-3Q9BYQ3 159 aa6.37□□□□□ -1.39
SHANK3-203ENST00000445220 LCE2BO14633 110 aa6.35□□□□□ -1.39
SHANK3-203ENST00000445220 MT1GP13640 62 aa6.33□□□□□ -1.4
SHANK3-203ENST00000445220 LCE2AQ5TA79 106 aaPredicted RBP6.31□□□□□ -1.4
SHANK3-203ENST00000445220 FSIP2Q5CZC0 6907 aa6.27□□□□□ -1.41
SHANK3-203ENST00000445220 LCE3DQ9BYE3 92 aa6.27□□□□□ -1.41
SHANK3-203ENST00000445220 KRTAP9-7A8MTY7 169 aa6.26□□□□□ -1.41
SHANK3-203ENST00000445220 RNF213Q63HN8 5207 aa6.26□□□□□ -1.41
SHANK3-203ENST00000445220 TNXBP22105 4242 aa6.24□□□□□ -1.41
SHANK3-203ENST00000445220 LCE3EQ5T5B0 92 aa6.22□□□□□ -1.41
SHANK3-203ENST00000445220 LPAP08519 4548 aa6.21□□□□□ -1.42
SHANK3-203ENST00000445220 KRTAP4-8A0A0G2JLE6 195 aa6.2□□□□□ -1.42
SHANK3-203ENST00000445220 KRTAP4-8Q9BYQ9 185 aa6.2□□□□□ -1.42
SHANK3-203ENST00000445220 KRTAP19-2Q3LHN2 52 aa6.16□□□□□ -1.42
SHANK3-203ENST00000445220 KRTAP19-6Q3LI70 58 aa6.1□□□□□ -1.43
SHANK3-203ENST00000445220 FAT4Q6V0I7 4981 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms