RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 CCKP06307 115 aa4.42□□□□□ -1.7
HDAC8-215ENST00000444609 COX7BP24311 80 aa4.42□□□□□ -1.7
HDAC8-215ENST00000444609 SPRR5A0A1B0GTR4 108 aa4.4□□□□□ -1.71
HDAC8-215ENST00000444609 COX7CP15954 63 aa4.4□□□□□ -1.71
HDAC8-215ENST00000444609 PDE6GP18545 87 aa4.4□□□□□ -1.71
HDAC8-215ENST00000444609 SPINK7P58062 85 aa4.4□□□□□ -1.71
HDAC8-215ENST00000444609 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.4□□□□□ -1.71
HDAC8-215ENST00000444609 C14orf132Q9NPU4 83 aa4.4□□□□□ -1.71
HDAC8-215ENST00000444609 Q6JHZ5 121 aa4.39□□□□□ -1.71
HDAC8-215ENST00000444609 LOC110117498A0A087WWA1 95 aa4.38□□□□□ -1.71
HDAC8-215ENST00000444609 SMIM26A0A096LP01 95 aa4.38□□□□□ -1.71
HDAC8-215ENST00000444609 FAM236AA0A1B0GUQ0 79 aa4.38□□□□□ -1.71
HDAC8-215ENST00000444609 FAM236BA0A1B0GV22 79 aa4.38□□□□□ -1.71
HDAC8-215ENST00000444609 RBM3P98179 157 aaKnown RBP4.38□□□□□ -1.71
HDAC8-215ENST00000444609 ATP5EP2Q5VTU8 51 aa4.38□□□□□ -1.71
HDAC8-215ENST00000444609 ATOX1O00244 68 aa4.36□□□□□ -1.71
HDAC8-215ENST00000444609 Q6ZQT0 140 aa4.36□□□□□ -1.71
HDAC8-215ENST00000444609 Q6ZQY7 126 aa4.36□□□□□ -1.71
HDAC8-215ENST00000444609 SERP1Q9Y6X1 66 aa4.36□□□□□ -1.71
HDAC8-215ENST00000444609 F8WEM9 126 aa4.35□□□□□ -1.71
HDAC8-215ENST00000444609 LINC00313P59037 77 aa4.35□□□□□ -1.71
HDAC8-215ENST00000444609 WFDC13Q8IUB5 93 aa4.35□□□□□ -1.71
HDAC8-215ENST00000444609 PRR15Q8IV56 129 aa4.35□□□□□ -1.71
HDAC8-215ENST00000444609 DSCR8Q96T75 97 aa4.35□□□□□ -1.71
HDAC8-215ENST00000444609 UBL5Q9BZL1 73 aa4.35□□□□□ -1.71
HDAC8-215ENST00000444609 HIST1H4AP62805 103 aaKnown RBP4.34□□□□□ -1.71
HDAC8-215ENST00000444609 TRBV7-4A0A0J9YYF1 115 aa4.33□□□□□ -1.72
HDAC8-215ENST00000444609 H3BS24 57 aa4.33□□□□□ -1.72
HDAC8-215ENST00000444609 H1FX-AS1Q4G0G2 97 aa4.32□□□□□ -1.72
HDAC8-215ENST00000444609 IGKV3D-7A0A0C4DH55 119 aa4.31□□□□□ -1.72
HDAC8-215ENST00000444609 A0A1B0GW54 56 aa4.31□□□□□ -1.72
HDAC8-215ENST00000444609 ATP5EP56381 51 aaPredicted RBP4.31□□□□□ -1.72
HDAC8-215ENST00000444609 BRK1Q8WUW1 75 aa4.3□□□□□ -1.72
HDAC8-215ENST00000444609 MT4P47944 62 aa4.29□□□□□ -1.72
HDAC8-215ENST00000444609 CXCL6P80162 114 aa4.29□□□□□ -1.72
HDAC8-215ENST00000444609 NDUFS5O43920 106 aa4.28□□□□□ -1.72
HDAC8-215ENST00000444609 KRTAP12-2P59991 146 aa4.28□□□□□ -1.72
HDAC8-215ENST00000444609 Q6ZVQ6 151 aa4.28□□□□□ -1.72
HDAC8-215ENST00000444609 SERP2Q8N6R1 65 aa4.28□□□□□ -1.72
HDAC8-215ENST00000444609 ZCCHC13Q8WW36 166 aaKnown RBP4.26□□□□□ -1.73
HDAC8-215ENST00000444609 A0A087WVE0 104 aa4.24□□□□□ -1.73
HDAC8-215ENST00000444609 PRO2289Q9P1D8 64 aa4.24□□□□□ -1.73
HDAC8-215ENST00000444609 NDUFC1O43677 76 aa4.23□□□□□ -1.73
HDAC8-215ENST00000444609 NREPQ16612 68 aa4.23□□□□□ -1.73
HDAC8-215ENST00000444609 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
HDAC8-215ENST00000444609 MT1XP80297 61 aa4.22□□□□□ -1.73
HDAC8-215ENST00000444609 TRAV7A0A075B6U4 112 aa4.21□□□□□ -1.74
HDAC8-215ENST00000444609 BPY2O14599 106 aa4.2□□□□□ -1.74
HDAC8-215ENST00000444609 C8orf87E5RJ46 101 aa4.19□□□□□ -1.74
HDAC8-215ENST00000444609 A0A087WSZ3 146 aa4.18□□□□□ -1.74
HDAC8-215ENST00000444609 IGKV4-1P06312 121 aa4.17□□□□□ -1.74
HDAC8-215ENST00000444609 KLKP1Q107X0 134 aa4.17□□□□□ -1.74
HDAC8-215ENST00000444609 LCA10Q71F78 164 aa4.14□□□□□ -1.75
HDAC8-215ENST00000444609 C20orf197Q8N268 126 aa4.13□□□□□ -1.75
HDAC8-215ENST00000444609 IGHV6-1A0A0B4J1U7 121 aa4.12□□□□□ -1.75
HDAC8-215ENST00000444609 OCR1Q9BZK8 76 aa4.11□□□□□ -1.75
HDAC8-215ENST00000444609 CYSTM1Q9H1C7 97 aa4.11□□□□□ -1.75
HDAC8-215ENST00000444609 A0A0A0MQY5 61 aa4.1□□□□□ -1.75
HDAC8-215ENST00000444609 Q1T7F1 81 aa4.1□□□□□ -1.75
HDAC8-215ENST00000444609 H7BZZ5 65 aa4.09□□□□□ -1.75
HDAC8-215ENST00000444609 Q8N9L7 120 aa4.09□□□□□ -1.75
HDAC8-215ENST00000444609 TMEM254Q8TBM7 123 aa4.09□□□□□ -1.75
HDAC8-215ENST00000444609 AHNAKQ09666 5890 aaKnown RBP4.08□□□□□ -1.76
HDAC8-215ENST00000444609 A8MUN3 132 aa4.08□□□□□ -1.76
HDAC8-215ENST00000444609 HCG22E2RYF7 251 aa4.08□□□□□ -1.76
HDAC8-215ENST00000444609 MP68P56378 58 aa4.08□□□□□ -1.76
HDAC8-215ENST00000444609 K7EQZ3 153 aa4.07□□□□□ -1.76
HDAC8-215ENST00000444609 C7orf65Q6ZTY9 151 aa4.07□□□□□ -1.76
HDAC8-215ENST00000444609 CRIPTQ9P021 101 aa4.07□□□□□ -1.76
HDAC8-215ENST00000444609 LINC00472Q9H8W2 130 aa4.06□□□□□ -1.76
HDAC8-215ENST00000444609 SNURFQ9Y675 71 aa4.06□□□□□ -1.76
HDAC8-215ENST00000444609 DEFB116Q30KQ4 102 aa4.05□□□□□ -1.76
HDAC8-215ENST00000444609 NDUFB1O75438 58 aa4.04□□□□□ -1.76
HDAC8-215ENST00000444609 H3BPC8 53 aa4.03□□□□□ -1.76
HDAC8-215ENST00000444609 CSAG1Q6PB30 78 aa4.03□□□□□ -1.76
HDAC8-215ENST00000444609 PSPHP1O15172 72 aa4.02□□□□□ -1.77
HDAC8-215ENST00000444609 KRTAP10-7P60409 375 aaPredicted RBP4.01□□□□□ -1.77
HDAC8-215ENST00000444609 CASC2Q6XLA1 102 aa4.01□□□□□ -1.77
HDAC8-215ENST00000444609 A0A1B0GVX0 72 aa4□□□□□ -1.77
HDAC8-215ENST00000444609 KRTAP10-12P60413 245 aa4□□□□□ -1.77
HDAC8-215ENST00000444609 KRTAP5-4Q6L8H1 288 aa4□□□□□ -1.77
HDAC8-215ENST00000444609 CYP4F30PQ9H0H9 118 aa4□□□□□ -1.77
HDAC8-215ENST00000444609 LINC01554Q52M75 96 aa3.99□□□□□ -1.77
HDAC8-215ENST00000444609 hDV103S1A0JD37 113 aa3.98□□□□□ -1.77
HDAC8-215ENST00000444609 TP53AIP1Q9HCN2 124 aa3.98□□□□□ -1.77
HDAC8-215ENST00000444609 MMP24-AS1A0A0U1RRL7 71 aa3.97□□□□□ -1.77
HDAC8-215ENST00000444609 C8orf17Q9NRJ1 99 aa3.96□□□□□ -1.78
HDAC8-215ENST00000444609 MUC5ACP98088 5654 aa3.96□□□□□ -1.78
HDAC8-215ENST00000444609 H0Y9P7 68 aa3.95□□□□□ -1.78
HDAC8-215ENST00000444609 TRAV22A0A0B4J277 110 aa3.94□□□□□ -1.78
HDAC8-215ENST00000444609 SPANXA2-OT1Q8N9U9 137 aa3.94□□□□□ -1.78
HDAC8-215ENST00000444609 PLAC4Q8WY50 150 aa3.94□□□□□ -1.78
HDAC8-215ENST00000444609 LINC00208Q96KT6 92 aa3.94□□□□□ -1.78
HDAC8-215ENST00000444609 KRTAP19-3Q7Z4W3 81 aa3.93□□□□□ -1.78
HDAC8-215ENST00000444609 S4R3F8 94 aa3.93□□□□□ -1.78
HDAC8-215ENST00000444609 MUC5BQ9HC84 5762 aaPredicted RBP3.93□□□□□ -1.78
HDAC8-215ENST00000444609 C1orf64Q8NEQ6 169 aa3.92□□□□□ -1.78
HDAC8-215ENST00000444609 MRPL34Q9BQ48 92 aaKnown RBP3.92□□□□□ -1.78
HDAC8-215ENST00000444609 CDC42SE1Q9NRR8 79 aa3.89□□□□□ -1.79
HDAC8-215ENST00000444609 SPTSSBQ8NFR3 76 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms