RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 MEGF8Q7Z7M0 2845 aa2.38□□□□□ -2.03
SCN11A-202ENST00000444237 KRTAP17-1Q9BYP8 105 aa2.37□□□□□ -2.03
SCN11A-202ENST00000444237 DNAH1Q9P2D7 4330 aa2.36□□□□□ -2.03
SCN11A-202ENST00000444237 VPS13DQ5THJ4 4388 aa2.36□□□□□ -2.03
SCN11A-202ENST00000444237 DNAH6Q9C0G6 4158 aa2.36□□□□□ -2.03
SCN11A-202ENST00000444237 DYNC2H1Q8NCM8 4307 aaKnown RBP2.35□□□□□ -2.03
SCN11A-202ENST00000444237 STARD9Q9P2P6 4700 aa2.35□□□□□ -2.03
SCN11A-202ENST00000444237 SRRM2Q9UQ35 2752 aaKnown RBP2.35□□□□□ -2.03
SCN11A-202ENST00000444237 DNAH10Q8IVF4 4471 aa2.32□□□□□ -2.04
SCN11A-202ENST00000444237 DNAH7Q8WXX0 4024 aa2.32□□□□□ -2.04
SCN11A-202ENST00000444237 LCE2BO14633 110 aa2.31□□□□□ -2.04
SCN11A-202ENST00000444237 MT1HL1P0DM35 61 aa2.31□□□□□ -2.04
SCN11A-202ENST00000444237 DNAH17Q9UFH2 4485 aa2.31□□□□□ -2.04
SCN11A-202ENST00000444237 KRTAP10-10P60014 251 aa2.31□□□□□ -2.04
SCN11A-202ENST00000444237 DNAH11Q96DT5 4516 aa2.3□□□□□ -2.04
SCN11A-202ENST00000444237 KRTAP10-4P60372 401 aaPredicted RBP2.3□□□□□ -2.04
SCN11A-202ENST00000444237 DNAH5Q8TE73 4624 aa2.28□□□□□ -2.04
SCN11A-202ENST00000444237 DYNC1H1Q14204 4646 aaKnown RBP2.28□□□□□ -2.04
SCN11A-202ENST00000444237 DNAH2Q9P225 4427 aa2.28□□□□□ -2.05
SCN11A-202ENST00000444237 FAT2Q9NYQ8 4349 aa2.27□□□□□ -2.05
SCN11A-202ENST00000444237 COL7A1Q02388 2944 aa2.27□□□□□ -2.05
SCN11A-202ENST00000444237 KMT2AQ03164 3969 aa2.27□□□□□ -2.05
SCN11A-202ENST00000444237 SACSQ9NZJ4 4579 aa2.26□□□□□ -2.05
SCN11A-202ENST00000444237 LCE2AQ5TA79 106 aaPredicted RBP2.24□□□□□ -2.05
SCN11A-202ENST00000444237 LRP1BQ9NZR2 4599 aa2.24□□□□□ -2.05
SCN11A-202ENST00000444237 DNAH8Q96JB1 4490 aa2.23□□□□□ -2.05
SCN11A-202ENST00000444237 RYR2Q92736 4967 aa2.23□□□□□ -2.05
SCN11A-202ENST00000444237 LYSTQ99698 3801 aa2.22□□□□□ -2.05
SCN11A-202ENST00000444237 CSMD3Q7Z407 3707 aa2.21□□□□□ -2.06
SCN11A-202ENST00000444237 LCE2CQ5TA81 110 aa2.2□□□□□ -2.06
SCN11A-202ENST00000444237 HYDINQ4G0P3 5121 aa2.19□□□□□ -2.06
SCN11A-202ENST00000444237 FRAS1Q86XX4 4008 aa2.18□□□□□ -2.06
SCN11A-202ENST00000444237 KRTAP12-3P60328 96 aa2.18□□□□□ -2.06
SCN11A-202ENST00000444237 LCE3AQ5TA76 89 aa2.17□□□□□ -2.06
SCN11A-202ENST00000444237 APOBP04114 4563 aaKnown RBP2.17□□□□□ -2.06
SCN11A-202ENST00000444237 HECTD4Q9Y4D8 3996 aa2.17□□□□□ -2.06
SCN11A-202ENST00000444237 BIRC6Q9NR09 4857 aa2.16□□□□□ -2.06
SCN11A-202ENST00000444237 KRTAP10-12P60413 245 aa2.16□□□□□ -2.06
SCN11A-202ENST00000444237 KRTAP9-6A0A140TA67 174 aa2.15□□□□□ -2.07
SCN11A-202ENST00000444237 HSPG2P98160 4391 aa2.14□□□□□ -2.07
SCN11A-202ENST00000444237 SPRR5A0A1B0GTR4 108 aa2.14□□□□□ -2.07
SCN11A-202ENST00000444237 FAT1Q14517 4588 aa2.14□□□□□ -2.07
SCN11A-202ENST00000444237 RYR3Q15413 4870 aa2.13□□□□□ -2.07
SCN11A-202ENST00000444237 LORP23490 312 aaPredicted RBP2.13□□□□□ -2.07
SCN11A-202ENST00000444237 VPS13BQ7Z7G8 4022 aa2.13□□□□□ -2.07
SCN11A-202ENST00000444237 PKD1P98161 4303 aa2.12□□□□□ -2.07
SCN11A-202ENST00000444237 RYR1P21817 5038 aa2.12□□□□□ -2.07
SCN11A-202ENST00000444237 KRTAP9-2Q9BYQ4 174 aa2.11□□□□□ -2.07
SCN11A-202ENST00000444237 PKHD1L1Q86WI1 4243 aa2.1□□□□□ -2.07
SCN11A-202ENST00000444237 KRTAP19-4Q3LI73 84 aa2.09□□□□□ -2.07
SCN11A-202ENST00000444237 CRCT1Q9UGL9 99 aa2.08□□□□□ -2.08
SCN11A-202ENST00000444237 PKHD1P08F94 4074 aa2.08□□□□□ -2.08
SCN11A-202ENST00000444237 KMT2CQ8NEZ4 4911 aaKnown RBP2.07□□□□□ -2.08
SCN11A-202ENST00000444237 KRTAP4-1Q9BYQ7 146 aa2.06□□□□□ -2.08
SCN11A-202ENST00000444237 FAT3Q8TDW7 4589 aa2.05□□□□□ -2.08
SCN11A-202ENST00000444237 EPPK1P58107 5090 aaKnown RBP2.04□□□□□ -2.08
SCN11A-202ENST00000444237 KIAA1109Q2LD37 5005 aa2.04□□□□□ -2.08
SCN11A-202ENST00000444237 MT1HP80294 61 aa2.03□□□□□ -2.08
SCN11A-202ENST00000444237 MYCBP2O75592 4640 aa2.03□□□□□ -2.08
SCN11A-202ENST00000444237 KRTAP8-1Q8IUC2 63 aa2.02□□□□□ -2.09
SCN11A-202ENST00000444237 HERC2O95714 4834 aa2.01□□□□□ -2.09
SCN11A-202ENST00000444237 TNXBP22105 4242 aa2□□□□□ -2.09
SCN11A-202ENST00000444237 LRP1Q07954 4544 aaKnown RBP2□□□□□ -2.09
SCN11A-202ENST00000444237 KRTAP10-5P60370 271 aa1.99□□□□□ -2.09
SCN11A-202ENST00000444237 PCLOQ9Y6V0 5065 aa1.96□□□□□ -2.1
SCN11A-202ENST00000444237 LCE3CQ5T5A8 94 aa1.96□□□□□ -2.1
SCN11A-202ENST00000444237 MUC17Q685J3 4493 aa1.95□□□□□ -2.1
SCN11A-202ENST00000444237 LPAP08519 4548 aa1.95□□□□□ -2.1
SCN11A-202ENST00000444237 HERC1Q15751 4861 aa1.95□□□□□ -2.1
SCN11A-202ENST00000444237 ABCA13Q86UQ4 5058 aa1.94□□□□□ -2.1
SCN11A-202ENST00000444237 SPRR2GQ9BYE4 73 aa1.94□□□□□ -2.1
SCN11A-202ENST00000444237 KRTAP9-7A8MTY7 169 aa1.94□□□□□ -2.1
SCN11A-202ENST00000444237 MT2AP02795 61 aa1.94□□□□□ -2.1
SCN11A-202ENST00000444237 LOC100996750A0A140TA64 210 aa1.93□□□□□ -2.1
SCN11A-202ENST00000444237 KRTAP4-6Q9BYQ5 205 aa1.93□□□□□ -2.1
SCN11A-202ENST00000444237 MT1FP04733 61 aa1.91□□□□□ -2.1
SCN11A-202ENST00000444237 KRTAP10-7P60409 375 aaPredicted RBP1.91□□□□□ -2.1
SCN11A-202ENST00000444237 SPRR2EP22531 72 aa1.9□□□□□ -2.1
SCN11A-202ENST00000444237 SPRR2BP35325 72 aa1.9□□□□□ -2.1
SCN11A-202ENST00000444237 SPRR2AP35326 72 aa1.9□□□□□ -2.1
SCN11A-202ENST00000444237 KRTAP20-1Q3LI63 56 aa1.89□□□□□ -2.11
SCN11A-202ENST00000444237 SPRR2FQ96RM1 72 aa1.88□□□□□ -2.11
SCN11A-202ENST00000444237 KRTAP19-5Q3LI72 72 aa1.86□□□□□ -2.11
SCN11A-202ENST00000444237 KRTAP12-4P60329 112 aa1.86□□□□□ -2.11
SCN11A-202ENST00000444237 SPRR2DP22532 72 aa1.86□□□□□ -2.11
SCN11A-202ENST00000444237 KRTAP19-1Q8IUB9 90 aa1.85□□□□□ -2.11
SCN11A-202ENST00000444237 LRP2P98164 4655 aa1.83□□□□□ -2.12
SCN11A-202ENST00000444237 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.81□□□□□ -2.12
SCN11A-202ENST00000444237 KRTAP9-8Q9BYQ0 159 aa1.8□□□□□ -2.12
SCN11A-202ENST00000444237 HMCN2Q8NDA2 5059 aa1.78□□□□□ -2.12
SCN11A-202ENST00000444237 MT3P25713 68 aa1.78□□□□□ -2.12
SCN11A-202ENST00000444237 KRTAP19-8Q3LI54 63 aa1.78□□□□□ -2.12
SCN11A-202ENST00000444237 KRTAP19-2Q3LHN2 52 aa1.77□□□□□ -2.13
SCN11A-202ENST00000444237 RNF213Q63HN8 5207 aa1.77□□□□□ -2.13
SCN11A-202ENST00000444237 KRTAP9-9Q9BYP9 154 aa1.76□□□□□ -2.13
SCN11A-202ENST00000444237 KRTAP9-4Q9BYQ2 154 aa1.76□□□□□ -2.13
SCN11A-202ENST00000444237 KRTAP9-3Q9BYQ3 159 aa1.76□□□□□ -2.13
SCN11A-202ENST00000444237 MT1XP80297 61 aa1.75□□□□□ -2.13
SCN11A-202ENST00000444237 KRTAP6-3Q3LI67 103 aa1.74□□□□□ -2.13
SCN11A-202ENST00000444237 FLGP20930 4061 aaPredicted RBP1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms