RNA–Protein interactions for RNA: ENST00000442138.6

PRRC1-202, Transcript of proline rich coiled-coil 1, humanhuman

TSL 1 (best) BASIC

Gene PRRC1, Length 5,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC1-202ENST00000442138 HRNRQ86YZ3 2850 aaPredicted RBP2.57□□□□□ -2
PRRC1-202ENST00000442138 SPRR2FQ96RM1 72 aa2.53□□□□□ -2
PRRC1-202ENST00000442138 MT3P25713 68 aa2.52□□□□□ -2.01
PRRC1-202ENST00000442138 KRTAP4-5Q9BYR2 181 aa2.51□□□□□ -2.01
PRRC1-202ENST00000442138 VPS13CQ709C8 3753 aa2.5□□□□□ -2.01
PRRC1-202ENST00000442138 AKAP9Q99996 3911 aa2.49□□□□□ -2.01
PRRC1-202ENST00000442138 FBN1P35555 2871 aaKnown RBP2.49□□□□□ -2.01
PRRC1-202ENST00000442138 LCE3BQ5TA77 95 aa2.49□□□□□ -2.01
PRRC1-202ENST00000442138 MT2AP02795 61 aa2.48□□□□□ -2.01
PRRC1-202ENST00000442138 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
PRRC1-202ENST00000442138 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
PRRC1-202ENST00000442138 OTOGQ6ZRI0 2925 aa2.46□□□□□ -2.02
PRRC1-202ENST00000442138 SPRR5A0A1B0GTR4 108 aa2.44□□□□□ -2.02
PRRC1-202ENST00000442138 MT1HP80294 61 aa2.43□□□□□ -2.02
PRRC1-202ENST00000442138 CSMD3Q7Z407 3707 aa2.41□□□□□ -2.02
PRRC1-202ENST00000442138 ZNF469Q96JG9 3925 aaPredicted RBP2.38□□□□□ -2.03
PRRC1-202ENST00000442138 MT1FP04733 61 aa2.38□□□□□ -2.03
PRRC1-202ENST00000442138 KRTAP4-1Q9BYQ7 146 aa2.38□□□□□ -2.03
PRRC1-202ENST00000442138 BSNQ9UPA5 3926 aa2.36□□□□□ -2.03
PRRC1-202ENST00000442138 MT1GP13640 62 aa2.35□□□□□ -2.03
PRRC1-202ENST00000442138 FAT1Q14517 4588 aa2.35□□□□□ -2.03
PRRC1-202ENST00000442138 SPRR2EP22531 72 aa2.34□□□□□ -2.04
PRRC1-202ENST00000442138 SPRR2BP35325 72 aa2.34□□□□□ -2.04
PRRC1-202ENST00000442138 SPRR2AP35326 72 aa2.34□□□□□ -2.04
PRRC1-202ENST00000442138 KRTAP19-8Q3LI54 63 aa2.33□□□□□ -2.04
PRRC1-202ENST00000442138 FAT3Q8TDW7 4589 aa2.31□□□□□ -2.04
PRRC1-202ENST00000442138 LCE2BO14633 110 aa2.3□□□□□ -2.04
PRRC1-202ENST00000442138 HUWE1Q7Z6Z7 4374 aaKnown RBP2.29□□□□□ -2.04
PRRC1-202ENST00000442138 LCE2DQ5TA82 110 aaPredicted RBP2.28□□□□□ -2.04
PRRC1-202ENST00000442138 ANK2Q01484 3957 aa2.27□□□□□ -2.05
PRRC1-202ENST00000442138 PRM1P04553 51 aa2.27□□□□□ -2.05
PRRC1-202ENST00000442138 SPRR2DP22532 72 aa2.27□□□□□ -2.05
PRRC1-202ENST00000442138 KRTAP19-1Q8IUB9 90 aa2.25□□□□□ -2.05
PRRC1-202ENST00000442138 MT1XP80297 61 aa2.24□□□□□ -2.05
PRRC1-202ENST00000442138 PLECQ15149 4684 aaKnown RBP2.24□□□□□ -2.05
PRRC1-202ENST00000442138 DNAH11Q96DT5 4516 aa2.23□□□□□ -2.05
PRRC1-202ENST00000442138 TRRAPQ9Y4A5 3859 aa2.23□□□□□ -2.05
PRRC1-202ENST00000442138 MT1LQ93083 61 aa2.22□□□□□ -2.05
PRRC1-202ENST00000442138 DNAH2Q9P225 4427 aa2.21□□□□□ -2.06
PRRC1-202ENST00000442138 LRP1Q07954 4544 aaKnown RBP2.2□□□□□ -2.06
PRRC1-202ENST00000442138 SYNE1Q8NF91 8797 aaKnown RBP2.2□□□□□ -2.06
PRRC1-202ENST00000442138 DNAH10Q8IVF4 4471 aa2.2□□□□□ -2.06
PRRC1-202ENST00000442138 DNAH3Q8TD57 4116 aa2.2□□□□□ -2.06
PRRC1-202ENST00000442138 LCE2CQ5TA81 110 aa2.16□□□□□ -2.06
PRRC1-202ENST00000442138 KRTAP19-3Q7Z4W3 81 aa2.16□□□□□ -2.06
PRRC1-202ENST00000442138 DNAH5Q8TE73 4624 aa2.16□□□□□ -2.06
PRRC1-202ENST00000442138 MT1BP07438 61 aa2.16□□□□□ -2.06
PRRC1-202ENST00000442138 ANK3Q12955 4377 aaKnown RBP2.15□□□□□ -2.07
PRRC1-202ENST00000442138 DNAH17Q9UFH2 4485 aa2.15□□□□□ -2.07
PRRC1-202ENST00000442138 KRTAP4-8A0A0G2JLE6 195 aa2.13□□□□□ -2.07
PRRC1-202ENST00000442138 KRTAP4-8Q9BYQ9 185 aa2.13□□□□□ -2.07
PRRC1-202ENST00000442138 MYCBP2O75592 4640 aa2.11□□□□□ -2.07
PRRC1-202ENST00000442138 ALMS1Q8TCU4 4167 aa2.11□□□□□ -2.07
PRRC1-202ENST00000442138 LYSTQ99698 3801 aa2.11□□□□□ -2.07
PRRC1-202ENST00000442138 DNAH8Q96JB1 4490 aa2.1□□□□□ -2.07
PRRC1-202ENST00000442138 LCE1BQ5T7P3 118 aa2.1□□□□□ -2.07
PRRC1-202ENST00000442138 DNHD1Q96M86 4753 aa2.08□□□□□ -2.08
PRRC1-202ENST00000442138 LOC100996750A0A140TA64 210 aa2.07□□□□□ -2.08
PRRC1-202ENST00000442138 KRTAP4-6Q9BYQ5 205 aa2.07□□□□□ -2.08
PRRC1-202ENST00000442138 MT1EP04732 61 aa2.07□□□□□ -2.08
PRRC1-202ENST00000442138 LCE1DQ5T752 114 aa2.07□□□□□ -2.08
PRRC1-202ENST00000442138 CMYA5Q8N3K9 4069 aa2.07□□□□□ -2.08
PRRC1-202ENST00000442138 DNAH1Q9P2D7 4330 aa2.05□□□□□ -2.08
PRRC1-202ENST00000442138 APOBP04114 4563 aaKnown RBP2.05□□□□□ -2.08
PRRC1-202ENST00000442138 KRTAP4-7Q9BYR0 210 aa2.04□□□□□ -2.08
PRRC1-202ENST00000442138 KRTAP9-8Q9BYQ0 159 aa2.04□□□□□ -2.08
PRRC1-202ENST00000442138 MT1MQ8N339 61 aa2.03□□□□□ -2.09
PRRC1-202ENST00000442138 SACSQ9NZJ4 4579 aa2.03□□□□□ -2.09
PRRC1-202ENST00000442138 HECTD4Q9Y4D8 3996 aa2.03□□□□□ -2.09
PRRC1-202ENST00000442138 KRTAP9-3Q9BYQ3 159 aa2.01□□□□□ -2.09
PRRC1-202ENST00000442138 DNAH6Q9C0G6 4158 aa2.01□□□□□ -2.09
PRRC1-202ENST00000442138 RYR1P21817 5038 aa2□□□□□ -2.09
PRRC1-202ENST00000442138 LRP1BQ9NZR2 4599 aa2□□□□□ -2.09
PRRC1-202ENST00000442138 DYNC1H1Q14204 4646 aaKnown RBP2□□□□□ -2.09
PRRC1-202ENST00000442138 MT1AP04731 61 aa1.98□□□□□ -2.09
PRRC1-202ENST00000442138 MT4P47944 62 aa1.98□□□□□ -2.09
PRRC1-202ENST00000442138 KRTAP2-3P0C7H8 128 aa1.97□□□□□ -2.09
PRRC1-202ENST00000442138 KRTAP2-4Q9BYR9 128 aa1.97□□□□□ -2.09
PRRC1-202ENST00000442138 KRTAP2-1Q9BYU5 128 aa1.97□□□□□ -2.09
PRRC1-202ENST00000442138 HERC1Q15751 4861 aa1.96□□□□□ -2.1
PRRC1-202ENST00000442138 LCE5AQ5TCM9 118 aa1.96□□□□□ -2.1
PRRC1-202ENST00000442138 DYNC2H1Q8NCM8 4307 aaKnown RBP1.95□□□□□ -2.1
PRRC1-202ENST00000442138 DNAH7Q8WXX0 4024 aa1.93□□□□□ -2.1
PRRC1-202ENST00000442138 VPS13DQ5THJ4 4388 aa1.93□□□□□ -2.1
PRRC1-202ENST00000442138 OBSCNQ5VST9 7968 aa1.91□□□□□ -2.1
PRRC1-202ENST00000442138 DNAH9Q9NYC9 4486 aa1.91□□□□□ -2.1
PRRC1-202ENST00000442138 KRTAP6-2Q3LI66 62 aa1.91□□□□□ -2.1
PRRC1-202ENST00000442138 PRKDCP78527 4128 aaKnown RBP1.9□□□□□ -2.11
PRRC1-202ENST00000442138 EPPK1P58107 5090 aaKnown RBP1.88□□□□□ -2.11
PRRC1-202ENST00000442138 FRAS1Q86XX4 4008 aa1.88□□□□□ -2.11
PRRC1-202ENST00000442138 BIRC6Q9NR09 4857 aa1.88□□□□□ -2.11
PRRC1-202ENST00000442138 PKHD1L1Q86WI1 4243 aa1.87□□□□□ -2.11
PRRC1-202ENST00000442138 KRTAP4-9Q9BYQ8 210 aa1.87□□□□□ -2.11
PRRC1-202ENST00000442138 PKHD1P08F94 4074 aa1.87□□□□□ -2.11
PRRC1-202ENST00000442138 PKD1P98161 4303 aa1.86□□□□□ -2.11
PRRC1-202ENST00000442138 KRTAP4-3Q9BYR4 195 aa1.86□□□□□ -2.11
PRRC1-202ENST00000442138 FAT2Q9NYQ8 4349 aa1.86□□□□□ -2.11
PRRC1-202ENST00000442138 HERC2O95714 4834 aa1.86□□□□□ -2.11
PRRC1-202ENST00000442138 RYR3Q15413 4870 aa1.85□□□□□ -2.11
PRRC1-202ENST00000442138 HSPG2P98160 4391 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms