RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 TENM2Q9NT68 2774 aa1.86□□□□□ -2.11
HMGB3P11-201ENST00000440127 PLECQ15149 4684 aaKnown RBP1.85□□□□□ -2.11
HMGB3P11-201ENST00000440127 A8MUN3 132 aa1.85□□□□□ -2.11
HMGB3P11-201ENST00000440127 BRK1Q8WUW1 75 aa1.85□□□□□ -2.11
HMGB3P11-201ENST00000440127 PRR15LQ9BU68 103 aa1.85□□□□□ -2.11
HMGB3P11-201ENST00000440127 LYSTQ99698 3801 aa1.85□□□□□ -2.11
HMGB3P11-201ENST00000440127 DNAH10Q8IVF4 4471 aa1.85□□□□□ -2.11
HMGB3P11-201ENST00000440127 FBN3Q75N90 2809 aa1.84□□□□□ -2.11
HMGB3P11-201ENST00000440127 KRTAP10-4P60372 401 aaPredicted RBP1.84□□□□□ -2.11
HMGB3P11-201ENST00000440127 DMAC1Q96GE9 116 aa1.84□□□□□ -2.11
HMGB3P11-201ENST00000440127 LCE3DQ9BYE3 92 aa1.84□□□□□ -2.11
HMGB3P11-201ENST00000440127 LINC01558Q9Y6Z2 57 aa1.84□□□□□ -2.11
HMGB3P11-201ENST00000440127 STARD9Q9P2P6 4700 aa1.84□□□□□ -2.12
HMGB3P11-201ENST00000440127 ALMS1Q8TCU4 4167 aa1.83□□□□□ -2.12
HMGB3P11-201ENST00000440127 CHKB-CPT1BH3BT56 60 aa1.83□□□□□ -2.12
HMGB3P11-201ENST00000440127 Q5VV11 94 aa1.83□□□□□ -2.12
HMGB3P11-201ENST00000440127 SRRM2Q9UQ35 2752 aaKnown RBP1.83□□□□□ -2.12
HMGB3P11-201ENST00000440127 HECTD4Q9Y4D8 3996 aa1.83□□□□□ -2.12
HMGB3P11-201ENST00000440127 A8MUU9 505 aa1.82□□□□□ -2.12
HMGB3P11-201ENST00000440127 DNAH17Q9UFH2 4485 aa1.82□□□□□ -2.12
HMGB3P11-201ENST00000440127 PRKDCP78527 4128 aaKnown RBP1.81□□□□□ -2.12
HMGB3P11-201ENST00000440127 C9orf92A6NGG3 77 aa1.81□□□□□ -2.12
HMGB3P11-201ENST00000440127 C7orf65Q6ZTY9 151 aa1.81□□□□□ -2.12
HMGB3P11-201ENST00000440127 C20orf166-AS1Q96NR2 134 aa1.81□□□□□ -2.12
HMGB3P11-201ENST00000440127 DNAH6Q9C0G6 4158 aa1.81□□□□□ -2.12
HMGB3P11-201ENST00000440127 A6NED7 52 aa1.8□□□□□ -2.12
HMGB3P11-201ENST00000440127 ADM2Q7Z4H4 148 aa1.8□□□□□ -2.12
HMGB3P11-201ENST00000440127 TGP01266 2768 aa1.8□□□□□ -2.12
HMGB3P11-201ENST00000440127 DNAH2Q9P225 4427 aa1.8□□□□□ -2.12
HMGB3P11-201ENST00000440127 DNAH8Q96JB1 4490 aa1.79□□□□□ -2.12
HMGB3P11-201ENST00000440127 Q5VSD8 79 aa1.79□□□□□ -2.12
HMGB3P11-201ENST00000440127 KMT2AQ03164 3969 aa1.79□□□□□ -2.12
HMGB3P11-201ENST00000440127 A0A1B0GU69 56 aa1.78□□□□□ -2.12
HMGB3P11-201ENST00000440127 ATP11AUNQ6ZP68 121 aa1.78□□□□□ -2.12
HMGB3P11-201ENST00000440127 LCA10Q71F78 164 aa1.78□□□□□ -2.12
HMGB3P11-201ENST00000440127 SPTSSBQ8NFR3 76 aa1.78□□□□□ -2.12
HMGB3P11-201ENST00000440127 CDC42SE1Q9NRR8 79 aa1.78□□□□□ -2.12
HMGB3P11-201ENST00000440127 PKD1P98161 4303 aa1.78□□□□□ -2.12
HMGB3P11-201ENST00000440127 K7ERS5 55 aa1.77□□□□□ -2.13
HMGB3P11-201ENST00000440127 SPINK7P58062 85 aa1.77□□□□□ -2.13
HMGB3P11-201ENST00000440127 DNAH11Q96DT5 4516 aa1.76□□□□□ -2.13
HMGB3P11-201ENST00000440127 PMAIP1Q13794 54 aa1.76□□□□□ -2.13
HMGB3P11-201ENST00000440127 UQCR11O14957 56 aa1.75□□□□□ -2.13
HMGB3P11-201ENST00000440127 KRTAP10-10P60014 251 aa1.75□□□□□ -2.13
HMGB3P11-201ENST00000440127 RPL37P61927 97 aaKnown RBP1.75□□□□□ -2.13
HMGB3P11-201ENST00000440127 SPATA8Q6RVD6 105 aa1.75□□□□□ -2.13
HMGB3P11-201ENST00000440127 COX6B2Q6YFQ2 88 aa1.75□□□□□ -2.13
HMGB3P11-201ENST00000440127 FRAS1Q86XX4 4008 aa1.75□□□□□ -2.13
HMGB3P11-201ENST00000440127 DNAH5Q8TE73 4624 aa1.74□□□□□ -2.13
HMGB3P11-201ENST00000440127 MIR22HGQ0VDD5 57 aa1.74□□□□□ -2.13
HMGB3P11-201ENST00000440127 SPINT4Q6UDR6 99 aa1.74□□□□□ -2.13
HMGB3P11-201ENST00000440127 LRP1BQ9NZR2 4599 aa1.73□□□□□ -2.13
HMGB3P11-201ENST00000440127 FAT2Q9NYQ8 4349 aa1.73□□□□□ -2.13
HMGB3P11-201ENST00000440127 A6NN06 94 aa1.73□□□□□ -2.13
HMGB3P11-201ENST00000440127 DNHD1Q96M86 4753 aa1.72□□□□□ -2.13
HMGB3P11-201ENST00000440127 SACSQ9NZJ4 4579 aa1.72□□□□□ -2.13
HMGB3P11-201ENST00000440127 MT1HL1P0DM35 61 aa1.72□□□□□ -2.13
HMGB3P11-201ENST00000440127 KTN1-AS1Q86SY8 53 aa1.71□□□□□ -2.14
HMGB3P11-201ENST00000440127 SPRR5A0A1B0GTR4 108 aa1.7□□□□□ -2.14
HMGB3P11-201ENST00000440127 A0A1B0GU33 70 aa1.7□□□□□ -2.14
HMGB3P11-201ENST00000440127 H1FX-AS1Q4G0G2 97 aa1.7□□□□□ -2.14
HMGB3P11-201ENST00000440127 R4GN34 69 aa1.7□□□□□ -2.14
HMGB3P11-201ENST00000440127 HYDINQ4G0P3 5121 aa1.7□□□□□ -2.14
HMGB3P11-201ENST00000440127 DYNC1H1Q14204 4646 aaKnown RBP1.7□□□□□ -2.14
HMGB3P11-201ENST00000440127 TPRXLQ17RH7 258 aa1.69□□□□□ -2.14
HMGB3P11-201ENST00000440127 KRTAP25-1Q3LHN0 102 aa1.69□□□□□ -2.14
HMGB3P11-201ENST00000440127 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
HMGB3P11-201ENST00000440127 S4R3F8 94 aa1.68□□□□□ -2.14
HMGB3P11-201ENST00000440127 FLG2Q5D862 2391 aaPredicted RBP1.67□□□□□ -2.14
HMGB3P11-201ENST00000440127 VPS13BQ7Z7G8 4022 aa1.67□□□□□ -2.14
HMGB3P11-201ENST00000440127 H0YAA0 97 aa1.67□□□□□ -2.14
HMGB3P11-201ENST00000440127 APOBP04114 4563 aaKnown RBP1.66□□□□□ -2.14
HMGB3P11-201ENST00000440127 PKHD1L1Q86WI1 4243 aa1.65□□□□□ -2.14
HMGB3P11-201ENST00000440127 PKHD1P08F94 4074 aa1.64□□□□□ -2.15
HMGB3P11-201ENST00000440127 RYR2Q92736 4967 aa1.64□□□□□ -2.15
HMGB3P11-201ENST00000440127 CSAG1Q6PB30 78 aa1.64□□□□□ -2.15
HMGB3P11-201ENST00000440127 P0C880 135 aa1.62□□□□□ -2.15
HMGB3P11-201ENST00000440127 FAT1Q14517 4588 aa1.62□□□□□ -2.15
HMGB3P11-201ENST00000440127 A0A0D9SG42 100 aa1.61□□□□□ -2.15
HMGB3P11-201ENST00000440127 KRTAP13-4Q3LI77 160 aa1.61□□□□□ -2.15
HMGB3P11-201ENST00000440127 KRTAP5-7Q6L8G8 165 aa1.61□□□□□ -2.15
HMGB3P11-201ENST00000440127 FAT3Q8TDW7 4589 aa1.6□□□□□ -2.15
HMGB3P11-201ENST00000440127 M0QZ58 72 aa1.6□□□□□ -2.15
HMGB3P11-201ENST00000440127 DMBT1Q9UGM3 2413 aaPredicted RBP1.59□□□□□ -2.15
HMGB3P11-201ENST00000440127 TNXBP22105 4242 aa1.59□□□□□ -2.15
HMGB3P11-201ENST00000440127 ROMO1P60602 79 aa1.59□□□□□ -2.15
HMGB3P11-201ENST00000440127 KRTAP4-1Q9BYQ7 146 aa1.59□□□□□ -2.15
HMGB3P11-201ENST00000440127 LINC01554Q52M75 96 aa1.58□□□□□ -2.16
HMGB3P11-201ENST00000440127 HSPG2P98160 4391 aa1.58□□□□□ -2.16
HMGB3P11-201ENST00000440127 RYR1P21817 5038 aa1.58□□□□□ -2.16
HMGB3P11-201ENST00000440127 LRP1Q07954 4544 aaKnown RBP1.57□□□□□ -2.16
HMGB3P11-201ENST00000440127 KMT2CQ8NEZ4 4911 aaKnown RBP1.57□□□□□ -2.16
HMGB3P11-201ENST00000440127 KRTAP12-1P59990 96 aa1.56□□□□□ -2.16
HMGB3P11-201ENST00000440127 KRTAP19-2Q3LHN2 52 aa1.56□□□□□ -2.16
HMGB3P11-201ENST00000440127 CRIPTQ9P021 101 aa1.54□□□□□ -2.16
HMGB3P11-201ENST00000440127 RYR3Q15413 4870 aa1.53□□□□□ -2.16
HMGB3P11-201ENST00000440127 KIAA1109Q2LD37 5005 aa1.53□□□□□ -2.16
HMGB3P11-201ENST00000440127 MYCBP2O75592 4640 aa1.51□□□□□ -2.17
HMGB3P11-201ENST00000440127 C10orf95Q9H7T3 257 aa1.5□□□□□ -2.17
HMGB3P11-201ENST00000440127 PRO2289Q9P1D8 64 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms