RNA–Protein interactions for RNA: ENST00000440111.6

TSC1-203, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,463 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-203ENST00000440111 DYNC2H1Q8NCM8 4307 aaKnown RBP3.33□□□□□ -1.88
TSC1-203ENST00000440111 AKAP9Q99996 3911 aa3.33□□□□□ -1.88
TSC1-203ENST00000440111 RYR2Q92736 4967 aa3.33□□□□□ -1.88
TSC1-203ENST00000440111 BSNQ9UPA5 3926 aa3.32□□□□□ -1.88
TSC1-203ENST00000440111 SPENQ96T58 3664 aaKnown RBP3.31□□□□□ -1.88
TSC1-203ENST00000440111 DNAH5Q8TE73 4624 aa3.31□□□□□ -1.88
TSC1-203ENST00000440111 KRTAP10-5P60370 271 aa3.31□□□□□ -1.88
TSC1-203ENST00000440111 DNAH6Q9C0G6 4158 aa3.3□□□□□ -1.88
TSC1-203ENST00000440111 DNAH3Q8TD57 4116 aa3.3□□□□□ -1.88
TSC1-203ENST00000440111 DNAH9Q9NYC9 4486 aa3.3□□□□□ -1.88
TSC1-203ENST00000440111 DNAH8Q96JB1 4490 aa3.29□□□□□ -1.88
TSC1-203ENST00000440111 RYR1P21817 5038 aa3.29□□□□□ -1.88
TSC1-203ENST00000440111 KRTAP8-1Q8IUC2 63 aa3.28□□□□□ -1.88
TSC1-203ENST00000440111 KRTAP19-4Q3LI73 84 aa3.27□□□□□ -1.89
TSC1-203ENST00000440111 SVEP1Q4LDE5 3571 aa3.27□□□□□ -1.89
TSC1-203ENST00000440111 SACSQ9NZJ4 4579 aa3.27□□□□□ -1.89
TSC1-203ENST00000440111 LRP1BQ9NZR2 4599 aa3.26□□□□□ -1.89
TSC1-203ENST00000440111 KRTAP10-7P60409 375 aaPredicted RBP3.25□□□□□ -1.89
TSC1-203ENST00000440111 CUBNO60494 3623 aa3.25□□□□□ -1.89
TSC1-203ENST00000440111 ZFHX3Q15911 3703 aa3.25□□□□□ -1.89
TSC1-203ENST00000440111 HSPG2P98160 4391 aa3.24□□□□□ -1.89
TSC1-203ENST00000440111 ANK2Q01484 3957 aa3.23□□□□□ -1.89
TSC1-203ENST00000440111 MYCBP2O75592 4640 aa3.23□□□□□ -1.89
TSC1-203ENST00000440111 VPS13CQ709C8 3753 aa3.16□□□□□ -1.9
TSC1-203ENST00000440111 CMYA5Q8N3K9 4069 aa3.16□□□□□ -1.9
TSC1-203ENST00000440111 MT3P25713 68 aa3.12□□□□□ -1.91
TSC1-203ENST00000440111 LORP23490 312 aaPredicted RBP3.12□□□□□ -1.91
TSC1-203ENST00000440111 BIRC6Q9NR09 4857 aa3.12□□□□□ -1.91
TSC1-203ENST00000440111 RYR3Q15413 4870 aa3.11□□□□□ -1.91
TSC1-203ENST00000440111 STARD9Q9P2P6 4700 aa3.11□□□□□ -1.91
TSC1-203ENST00000440111 SPRR2GQ9BYE4 73 aa3.1□□□□□ -1.91
TSC1-203ENST00000440111 LCE3AQ5TA76 89 aa3.09□□□□□ -1.91
TSC1-203ENST00000440111 APOBP04114 4563 aaKnown RBP3.09□□□□□ -1.91
TSC1-203ENST00000440111 DNHD1Q96M86 4753 aa3.08□□□□□ -1.92
TSC1-203ENST00000440111 TRRAPQ9Y4A5 3859 aa3.08□□□□□ -1.92
TSC1-203ENST00000440111 ZNF469Q96JG9 3925 aaPredicted RBP3.07□□□□□ -1.92
TSC1-203ENST00000440111 PCLOQ9Y6V0 5065 aa3.04□□□□□ -1.92
TSC1-203ENST00000440111 KIAA1109Q2LD37 5005 aa3.04□□□□□ -1.92
TSC1-203ENST00000440111 FAT1Q14517 4588 aa3.03□□□□□ -1.92
TSC1-203ENST00000440111 FAT2Q9NYQ8 4349 aa3□□□□□ -1.93
TSC1-203ENST00000440111 KMT2CQ8NEZ4 4911 aaKnown RBP2.99□□□□□ -1.93
TSC1-203ENST00000440111 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
TSC1-203ENST00000440111 KRTAP19-8Q3LI54 63 aa2.98□□□□□ -1.93
TSC1-203ENST00000440111 DNAH7Q8WXX0 4024 aa2.97□□□□□ -1.93
TSC1-203ENST00000440111 KRTAP4-5Q9BYR2 181 aa2.96□□□□□ -1.94
TSC1-203ENST00000440111 FAT3Q8TDW7 4589 aa2.96□□□□□ -1.94
TSC1-203ENST00000440111 KRTAP4-1Q9BYQ7 146 aa2.96□□□□□ -1.94
TSC1-203ENST00000440111 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
TSC1-203ENST00000440111 PKHD1P08F94 4074 aa2.95□□□□□ -1.94
TSC1-203ENST00000440111 SPRR2FQ96RM1 72 aa2.94□□□□□ -1.94
TSC1-203ENST00000440111 HYDINQ4G0P3 5121 aa2.94□□□□□ -1.94
TSC1-203ENST00000440111 HECTD4Q9Y4D8 3996 aa2.92□□□□□ -1.94
TSC1-203ENST00000440111 LYSTQ99698 3801 aa2.91□□□□□ -1.94
TSC1-203ENST00000440111 MT2AP02795 61 aa2.91□□□□□ -1.94
TSC1-203ENST00000440111 MT1HP80294 61 aa2.91□□□□□ -1.94
TSC1-203ENST00000440111 HERC2O95714 4834 aa2.91□□□□□ -1.94
TSC1-203ENST00000440111 PRKDCP78527 4128 aaKnown RBP2.86□□□□□ -1.95
TSC1-203ENST00000440111 LCE3CQ5T5A8 94 aa2.86□□□□□ -1.95
TSC1-203ENST00000440111 KRTAP19-2Q3LHN2 52 aa2.86□□□□□ -1.95
TSC1-203ENST00000440111 PKHD1L1Q86WI1 4243 aa2.86□□□□□ -1.95
TSC1-203ENST00000440111 VPS13BQ7Z7G8 4022 aa2.85□□□□□ -1.95
TSC1-203ENST00000440111 ABCA13Q86UQ4 5058 aa2.85□□□□□ -1.95
TSC1-203ENST00000440111 KRTAP19-1Q8IUB9 90 aa2.84□□□□□ -1.95
TSC1-203ENST00000440111 LRP1Q07954 4544 aaKnown RBP2.83□□□□□ -1.96
TSC1-203ENST00000440111 FRAS1Q86XX4 4008 aa2.83□□□□□ -1.96
TSC1-203ENST00000440111 MT1FP04733 61 aa2.81□□□□□ -1.96
TSC1-203ENST00000440111 SPRR2EP22531 72 aa2.81□□□□□ -1.96
TSC1-203ENST00000440111 SPRR2BP35325 72 aa2.81□□□□□ -1.96
TSC1-203ENST00000440111 SPRR2AP35326 72 aa2.81□□□□□ -1.96
TSC1-203ENST00000440111 MUC17Q685J3 4493 aa2.79□□□□□ -1.96
TSC1-203ENST00000440111 LCE2BO14633 110 aa2.78□□□□□ -1.96
TSC1-203ENST00000440111 KRTAP17-1Q9BYP8 105 aa2.77□□□□□ -1.97
TSC1-203ENST00000440111 RNF213Q63HN8 5207 aa2.77□□□□□ -1.97
TSC1-203ENST00000440111 LCE2CQ5TA81 110 aa2.77□□□□□ -1.97
TSC1-203ENST00000440111 SPRR2DP22532 72 aa2.77□□□□□ -1.97
TSC1-203ENST00000440111 PKD1P98161 4303 aa2.76□□□□□ -1.97
TSC1-203ENST00000440111 CSMD3Q7Z407 3707 aa2.75□□□□□ -1.97
TSC1-203ENST00000440111 KMT2AQ03164 3969 aa2.73□□□□□ -1.97
TSC1-203ENST00000440111 KRTAP19-5Q3LI72 72 aa2.73□□□□□ -1.97
TSC1-203ENST00000440111 MT1BP07438 61 aa2.72□□□□□ -1.97
TSC1-203ENST00000440111 HMCN2Q8NDA2 5059 aa2.72□□□□□ -1.97
TSC1-203ENST00000440111 MT1XP80297 61 aa2.72□□□□□ -1.97
TSC1-203ENST00000440111 KRTAP9-8Q9BYQ0 159 aa2.71□□□□□ -1.98
TSC1-203ENST00000440111 TNXBP22105 4242 aa2.7□□□□□ -1.98
TSC1-203ENST00000440111 LCE3BQ5TA77 95 aa2.68□□□□□ -1.98
TSC1-203ENST00000440111 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
TSC1-203ENST00000440111 KRTAP9-3Q9BYQ3 159 aa2.67□□□□□ -1.98
TSC1-203ENST00000440111 LRP2P98164 4655 aa2.67□□□□□ -1.98
TSC1-203ENST00000440111 EPPK1P58107 5090 aaKnown RBP2.65□□□□□ -1.98
TSC1-203ENST00000440111 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
TSC1-203ENST00000440111 FLGP20930 4061 aaPredicted RBP2.62□□□□□ -1.99
TSC1-203ENST00000440111 FAT4Q6V0I7 4981 aa2.61□□□□□ -1.99
TSC1-203ENST00000440111 MT1GP13640 62 aa2.59□□□□□ -1.99
TSC1-203ENST00000440111 LCE2DQ5TA82 110 aaPredicted RBP2.55□□□□□ -2
TSC1-203ENST00000440111 UBR4Q5T4S7 5183 aa2.52□□□□□ -2.01
TSC1-203ENST00000440111 MT1EP04732 61 aa2.5□□□□□ -2.01
TSC1-203ENST00000440111 MT1LQ93083 61 aa2.49□□□□□ -2.01
TSC1-203ENST00000440111 KRTAP19-6Q3LI70 58 aa2.48□□□□□ -2.01
TSC1-203ENST00000440111 PRM1P04553 51 aa2.45□□□□□ -2.02
TSC1-203ENST00000440111 LCE2AQ5TA79 106 aaPredicted RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms