RNA–Protein interactions for RNA: ENST00000439346.5

CHEK2-217, Transcript of checkpoint kinase 2, humanhuman

TSL 4

Gene CHEK2, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-217ENST00000439346 MYCBP2O75592 4640 aa0.61□□□□□ -2.31
CHEK2-217ENST00000439346 KALRNO60229 2985 aa0.61□□□□□ -2.31
CHEK2-217ENST00000439346 SPRR2AP35326 72 aa0.61□□□□□ -2.31
CHEK2-217ENST00000439346 DEFB124Q8NES8 71 aa0.61□□□□□ -2.31
CHEK2-217ENST00000439346 CELSR3Q9NYQ7 3312 aa0.61□□□□□ -2.31
CHEK2-217ENST00000439346 CFAP54Q96N23 3096 aa0.61□□□□□ -2.31
CHEK2-217ENST00000439346 LRP1Q07954 4544 aaKnown RBP0.61□□□□□ -2.31
CHEK2-217ENST00000439346 STAB1Q9NY15 2570 aa0.6□□□□□ -2.31
CHEK2-217ENST00000439346 SPTBN5Q9NRC6 3674 aaKnown RBP0.6□□□□□ -2.31
CHEK2-217ENST00000439346 MT1AP04731 61 aa0.6□□□□□ -2.31
CHEK2-217ENST00000439346 KRTAP6-2Q3LI66 62 aa0.6□□□□□ -2.31
CHEK2-217ENST00000439346 KRTAP8-1Q8IUC2 63 aa0.6□□□□□ -2.31
CHEK2-217ENST00000439346 LPAP08519 4548 aa0.6□□□□□ -2.31
CHEK2-217ENST00000439346 HTTP42858 3142 aa0.6□□□□□ -2.31
CHEK2-217ENST00000439346 DNAH8Q96JB1 4490 aa0.59□□□□□ -2.31
CHEK2-217ENST00000439346 SONP18583 2426 aaKnown RBP0.59□□□□□ -2.32
CHEK2-217ENST00000439346 COL7A1Q02388 2944 aa0.59□□□□□ -2.32
CHEK2-217ENST00000439346 TGP01266 2768 aa0.59□□□□□ -2.32
CHEK2-217ENST00000439346 HRNRQ86YZ3 2850 aaPredicted RBP0.58□□□□□ -2.32
CHEK2-217ENST00000439346 HIVEP1P15822 2718 aa0.58□□□□□ -2.32
CHEK2-217ENST00000439346 DEFB136Q30KP8 78 aa0.58□□□□□ -2.32
CHEK2-217ENST00000439346 LAMA5O15230 3695 aa0.58□□□□□ -2.32
CHEK2-217ENST00000439346 DMXL2Q8TDJ6 3036 aa0.58□□□□□ -2.32
CHEK2-217ENST00000439346 FRYLO94915 3013 aa0.57□□□□□ -2.32
CHEK2-217ENST00000439346 IGSF10Q6WRI0 2623 aa0.57□□□□□ -2.32
CHEK2-217ENST00000439346 USP9XQ93008 2570 aaPredicted RBP0.57□□□□□ -2.32
CHEK2-217ENST00000439346 HSPG2P98160 4391 aa0.57□□□□□ -2.32
CHEK2-217ENST00000439346 PKHD1P08F94 4074 aa0.57□□□□□ -2.32
CHEK2-217ENST00000439346 RELNP78509 3460 aa0.57□□□□□ -2.32
CHEK2-217ENST00000439346 ZANQ9Y493 2812 aa0.56□□□□□ -2.32
CHEK2-217ENST00000439346 PRUNE2Q8WUY3 3088 aa0.56□□□□□ -2.32
CHEK2-217ENST00000439346 ITPR1Q14643 2758 aa0.56□□□□□ -2.32
CHEK2-217ENST00000439346 FASNP49327 2511 aaKnown RBP0.56□□□□□ -2.32
CHEK2-217ENST00000439346 DEFB1P60022 68 aa0.56□□□□□ -2.32
CHEK2-217ENST00000439346 DEFB133Q30KQ1 61 aa0.56□□□□□ -2.32
CHEK2-217ENST00000439346 DNAH9Q9NYC9 4486 aa0.56□□□□□ -2.32
CHEK2-217ENST00000439346 DNAH1Q9P2D7 4330 aa0.56□□□□□ -2.32
CHEK2-217ENST00000439346 CMYA5Q8N3K9 4069 aa0.56□□□□□ -2.32
CHEK2-217ENST00000439346 TEP1Q99973 2627 aaKnown RBP0.55□□□□□ -2.32
CHEK2-217ENST00000439346 LRBAP50851 2863 aa0.55□□□□□ -2.32
CHEK2-217ENST00000439346 MYO18BQ8IUG5 2567 aa0.55□□□□□ -2.32
CHEK2-217ENST00000439346 TRIOO75962 3097 aa0.54□□□□□ -2.32
CHEK2-217ENST00000439346 ATMQ13315 3056 aa0.54□□□□□ -2.32
CHEK2-217ENST00000439346 MXRA5Q9NR99 2828 aa0.54□□□□□ -2.32
CHEK2-217ENST00000439346 WDR87Q6ZQQ6 2873 aa0.54□□□□□ -2.32
CHEK2-217ENST00000439346 SPTAN1Q13813 2472 aaKnown RBP0.54□□□□□ -2.32
CHEK2-217ENST00000439346 Q9Y3F1 56 aa0.53□□□□□ -2.32
CHEK2-217ENST00000439346 LAMA3Q16787 3333 aa0.53□□□□□ -2.33
CHEK2-217ENST00000439346 MGAM2Q2M2H8 2515 aa0.53□□□□□ -2.33
CHEK2-217ENST00000439346 MAST4O15021 2626 aa0.52□□□□□ -2.33
CHEK2-217ENST00000439346 CSMD1Q96PZ7 3565 aa0.52□□□□□ -2.33
CHEK2-217ENST00000439346 SMG1Q96Q15 3661 aaKnown RBP0.52□□□□□ -2.33
CHEK2-217ENST00000439346 NIPBLQ6KC79 2804 aaeCLIP0.52□□□□□ -2.33
CHEK2-217ENST00000439346 TRRAPQ9Y4A5 3859 aa0.52□□□□□ -2.33
CHEK2-217ENST00000439346 FLNAP21333 2647 aaKnown RBP0.52□□□□□ -2.33
CHEK2-217ENST00000439346 TEX15Q9BXT5 2789 aa0.52□□□□□ -2.33
CHEK2-217ENST00000439346 C5orf42Q9H799 3197 aa0.52□□□□□ -2.33
CHEK2-217ENST00000439346 FAT3Q8TDW7 4589 aa0.52□□□□□ -2.33
CHEK2-217ENST00000439346 APOBP04114 4563 aaKnown RBP0.51□□□□□ -2.33
CHEK2-217ENST00000439346 CD52P31358 61 aa0.51□□□□□ -2.33
CHEK2-217ENST00000439346 RPS29P62273 56 aaKnown RBP0.51□□□□□ -2.33
CHEK2-217ENST00000439346 DOPEY1Q5JWR5 2465 aa0.51□□□□□ -2.33
CHEK2-217ENST00000439346 DNAH10Q8IVF4 4471 aa0.51□□□□□ -2.33
CHEK2-217ENST00000439346 ADGRG4Q8IZF6 3080 aa0.51□□□□□ -2.33
CHEK2-217ENST00000439346 CFAP46Q8IYW2 2715 aa0.51□□□□□ -2.33
CHEK2-217ENST00000439346 COL6A3P12111 3177 aa0.5□□□□□ -2.33
CHEK2-217ENST00000439346 SMR3BP02814 79 aaPredicted RBP0.5□□□□□ -2.33
CHEK2-217ENST00000439346 SPRR2EP22531 72 aa0.5□□□□□ -2.33
CHEK2-217ENST00000439346 NBEAL1Q6ZS30 2694 aa0.49□□□□□ -2.33
CHEK2-217ENST00000439346 STATHP02808 62 aa0.49□□□□□ -2.33
CHEK2-217ENST00000439346 SPRR2FQ96RM1 72 aa0.49□□□□□ -2.33
CHEK2-217ENST00000439346 LAMA1P25391 3075 aa0.49□□□□□ -2.33
CHEK2-217ENST00000439346 LINC01556Q5JQF7 62 aa0.48□□□□□ -2.33
CHEK2-217ENST00000439346 DNAH12Q6ZR08 3092 aa0.48□□□□□ -2.33
CHEK2-217ENST00000439346 PLECQ15149 4684 aaKnown RBP0.47□□□□□ -2.33
CHEK2-217ENST00000439346 FAT1Q14517 4588 aa0.47□□□□□ -2.33
CHEK2-217ENST00000439346 MAP1AP78559 2803 aaPredicted RBP0.46□□□□□ -2.34
CHEK2-217ENST00000439346 SZT2Q5T011 3432 aa0.46□□□□□ -2.34
CHEK2-217ENST00000439346 DMDP11532 3685 aa0.46□□□□□ -2.34
CHEK2-217ENST00000439346 SVEP1Q4LDE5 3571 aa0.46□□□□□ -2.34
CHEK2-217ENST00000439346 A0A096LPF7 62 aa0.46□□□□□ -2.34
CHEK2-217ENST00000439346 KRTAP19-5Q3LI72 72 aa0.46□□□□□ -2.34
CHEK2-217ENST00000439346 DEFB108BQ8NET1 73 aa0.46□□□□□ -2.34
CHEK2-217ENST00000439346 LRP1BQ9NZR2 4599 aa0.46□□□□□ -2.34
CHEK2-217ENST00000439346 STAB2Q8WWQ8 2551 aa0.45□□□□□ -2.34
CHEK2-217ENST00000439346 FREM2Q5SZK8 3169 aa0.45□□□□□ -2.34
CHEK2-217ENST00000439346 ITPR2Q14571 2701 aa0.45□□□□□ -2.34
CHEK2-217ENST00000439346 KMT2DO14686 5537 aa0.45□□□□□ -2.34
CHEK2-217ENST00000439346 MDN1Q9NU22 5596 aa0.44□□□□□ -2.34
CHEK2-217ENST00000439346 FAT4Q6V0I7 4981 aa0.44□□□□□ -2.34
CHEK2-217ENST00000439346 XIRP2A4UGR9 3374 aa0.43□□□□□ -2.34
CHEK2-217ENST00000439346 CENPEQ02224 2701 aa0.43□□□□□ -2.34
CHEK2-217ENST00000439346 PHGR1C9JFL3 82 aa0.43□□□□□ -2.34
CHEK2-217ENST00000439346 COX14Q96I36 57 aa0.43□□□□□ -2.34
CHEK2-217ENST00000439346 MUC3AQ02505 3323 aa0.43□□□□□ -2.34
CHEK2-217ENST00000439346 MKI67P46013 3256 aaKnown RBP0.43□□□□□ -2.34
CHEK2-217ENST00000439346 CEP295Q9C0D2 2601 aa0.43□□□□□ -2.34
CHEK2-217ENST00000439346 DNAH5Q8TE73 4624 aa0.42□□□□□ -2.34
CHEK2-217ENST00000439346 TLN1Q9Y490 2541 aaKnown RBP0.42□□□□□ -2.34
CHEK2-217ENST00000439346 DCHS1Q96JQ0 3298 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms