RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 FRAS1Q86XX4 4008 aa0.73□□□□□ -2.29
LSM1P1-201ENST00000438629 PKD1P98161 4303 aa0.73□□□□□ -2.29
LSM1P1-201ENST00000438629 HUWE1Q7Z6Z7 4374 aaKnown RBP0.73□□□□□ -2.29
LSM1P1-201ENST00000438629 DNAH14Q0VDD8 3507 aa0.72□□□□□ -2.29
LSM1P1-201ENST00000438629 NCOR2Q9Y618 2525 aa0.72□□□□□ -2.29
LSM1P1-201ENST00000438629 ACACBO00763 2458 aa0.72□□□□□ -2.29
LSM1P1-201ENST00000438629 PTPN13Q12923 2485 aa0.72□□□□□ -2.29
LSM1P1-201ENST00000438629 FRYQ5TBA9 3013 aa0.72□□□□□ -2.29
LSM1P1-201ENST00000438629 LINC01556Q5JQF7 62 aa0.72□□□□□ -2.29
LSM1P1-201ENST00000438629 U3KQA8 63 aa0.72□□□□□ -2.29
LSM1P1-201ENST00000438629 ASPMQ8IZT6 3477 aa0.72□□□□□ -2.29
LSM1P1-201ENST00000438629 BDP1A6H8Y1 2624 aa0.72□□□□□ -2.29
LSM1P1-201ENST00000438629 FREM2Q5SZK8 3169 aa0.72□□□□□ -2.29
LSM1P1-201ENST00000438629 HECTD4Q9Y4D8 3996 aa0.72□□□□□ -2.29
LSM1P1-201ENST00000438629 ZFYVE26Q68DK2 2539 aa0.72□□□□□ -2.29
LSM1P1-201ENST00000438629 FLGP20930 4061 aaPredicted RBP0.72□□□□□ -2.29
LSM1P1-201ENST00000438629 WDFY3Q8IZQ1 3526 aa0.72□□□□□ -2.29
LSM1P1-201ENST00000438629 CELSR3Q9NYQ7 3312 aa0.71□□□□□ -2.3
LSM1P1-201ENST00000438629 CHD8Q9HCK8 2581 aa0.71□□□□□ -2.3
LSM1P1-201ENST00000438629 PLECQ15149 4684 aaKnown RBP0.71□□□□□ -2.3
LSM1P1-201ENST00000438629 KRTAP19-3Q7Z4W3 81 aa0.71□□□□□ -2.3
LSM1P1-201ENST00000438629 USP9YO00507 2555 aaPredicted RBP0.71□□□□□ -2.3
LSM1P1-201ENST00000438629 STAB1Q9NY15 2570 aa0.71□□□□□ -2.3
LSM1P1-201ENST00000438629 GCN1Q92616 2671 aaKnown RBP0.71□□□□□ -2.3
LSM1P1-201ENST00000438629 TEP1Q99973 2627 aaKnown RBP0.7□□□□□ -2.3
LSM1P1-201ENST00000438629 LAMA1P25391 3075 aa0.7□□□□□ -2.3
LSM1P1-201ENST00000438629 DEFB133Q30KQ1 61 aa0.7□□□□□ -2.3
LSM1P1-201ENST00000438629 FRYLO94915 3013 aa0.7□□□□□ -2.3
LSM1P1-201ENST00000438629 HIVEP3Q5T1R4 2406 aa0.7□□□□□ -2.3
LSM1P1-201ENST00000438629 COL7A1Q02388 2944 aa0.7□□□□□ -2.3
LSM1P1-201ENST00000438629 APOBP04114 4563 aaKnown RBP0.7□□□□□ -2.3
LSM1P1-201ENST00000438629 ITPR3Q14573 2671 aa0.7□□□□□ -2.3
LSM1P1-201ENST00000438629 SETXQ7Z333 2677 aaKnown RBP0.7□□□□□ -2.3
LSM1P1-201ENST00000438629 TENM3Q9P273 2699 aa0.69□□□□□ -2.3
LSM1P1-201ENST00000438629 DMDP11532 3685 aa0.69□□□□□ -2.3
LSM1P1-201ENST00000438629 DOPEY1Q5JWR5 2465 aa0.69□□□□□ -2.3
LSM1P1-201ENST00000438629 Q9Y3F1 56 aa0.69□□□□□ -2.3
LSM1P1-201ENST00000438629 UNC79Q9P2D8 2635 aa0.69□□□□□ -2.3
LSM1P1-201ENST00000438629 BOD1L1Q8NFC6 3051 aa0.69□□□□□ -2.3
LSM1P1-201ENST00000438629 DCHS2Q6V1P9 2916 aa0.68□□□□□ -2.3
LSM1P1-201ENST00000438629 COL12A1Q99715 3063 aa0.68□□□□□ -2.3
LSM1P1-201ENST00000438629 DNAH5Q8TE73 4624 aa0.68□□□□□ -2.3
LSM1P1-201ENST00000438629 CUBNO60494 3623 aa0.68□□□□□ -2.3
LSM1P1-201ENST00000438629 LRP1Q07954 4544 aaKnown RBP0.68□□□□□ -2.3
LSM1P1-201ENST00000438629 MYO9AB2RTY4 2548 aa0.68□□□□□ -2.3
LSM1P1-201ENST00000438629 NF1P21359 2839 aa0.68□□□□□ -2.3
LSM1P1-201ENST00000438629 ZZEF1O43149 2961 aa0.68□□□□□ -2.3
LSM1P1-201ENST00000438629 DNAH9Q9NYC9 4486 aa0.68□□□□□ -2.3
LSM1P1-201ENST00000438629 MAST4O15021 2626 aa0.68□□□□□ -2.3
LSM1P1-201ENST00000438629 MYO18BQ8IUG5 2567 aa0.68□□□□□ -2.3
LSM1P1-201ENST00000438629 NBEAQ8NFP9 2946 aa0.68□□□□□ -2.3
LSM1P1-201ENST00000438629 DMXL2Q8TDJ6 3036 aa0.67□□□□□ -2.3
LSM1P1-201ENST00000438629 LRRK2Q5S007 2527 aa0.67□□□□□ -2.3
LSM1P1-201ENST00000438629 FLNBO75369 2602 aaKnown RBP0.67□□□□□ -2.3
LSM1P1-201ENST00000438629 RPS29P62273 56 aaKnown RBP0.67□□□□□ -2.3
LSM1P1-201ENST00000438629 SPTAN1Q13813 2472 aaKnown RBP0.67□□□□□ -2.3
LSM1P1-201ENST00000438629 SMG1Q96Q15 3661 aaKnown RBP0.67□□□□□ -2.3
LSM1P1-201ENST00000438629 SPG11Q96JI7 2443 aa0.67□□□□□ -2.3
LSM1P1-201ENST00000438629 ATMQ13315 3056 aa0.67□□□□□ -2.3
LSM1P1-201ENST00000438629 LAMA5O15230 3695 aa0.67□□□□□ -2.3
LSM1P1-201ENST00000438629 FLNCQ14315 2725 aa0.66□□□□□ -2.3
LSM1P1-201ENST00000438629 USP9XQ93008 2570 aaPredicted RBP0.66□□□□□ -2.3
LSM1P1-201ENST00000438629 CMYA5Q8N3K9 4069 aa0.66□□□□□ -2.3
LSM1P1-201ENST00000438629 ACANP16112 2415 aa0.66□□□□□ -2.3
LSM1P1-201ENST00000438629 IGSF10Q6WRI0 2623 aa0.66□□□□□ -2.3
LSM1P1-201ENST00000438629 PKHD1P08F94 4074 aa0.66□□□□□ -2.3
LSM1P1-201ENST00000438629 RYR3Q15413 4870 aa0.66□□□□□ -2.3
LSM1P1-201ENST00000438629 BIRC6Q9NR09 4857 aa0.65□□□□□ -2.3
LSM1P1-201ENST00000438629 ANKRD11Q6UB99 2663 aaPredicted RBP0.65□□□□□ -2.3
LSM1P1-201ENST00000438629 MTORP42345 2549 aa0.65□□□□□ -2.31
LSM1P1-201ENST00000438629 CFAP46Q8IYW2 2715 aa0.65□□□□□ -2.31
LSM1P1-201ENST00000438629 APCP25054 2843 aa0.65□□□□□ -2.31
LSM1P1-201ENST00000438629 DNAH17Q9UFH2 4485 aa0.65□□□□□ -2.31
LSM1P1-201ENST00000438629 CSMD1Q96PZ7 3565 aa0.64□□□□□ -2.31
LSM1P1-201ENST00000438629 CEP295Q9C0D2 2601 aa0.64□□□□□ -2.31
LSM1P1-201ENST00000438629 TACC2O95359 2948 aa0.64□□□□□ -2.31
LSM1P1-201ENST00000438629 SMR3BP02814 79 aaPredicted RBP0.64□□□□□ -2.31
LSM1P1-201ENST00000438629 NSD1Q96L73 2696 aaPredicted RBP0.64□□□□□ -2.31
LSM1P1-201ENST00000438629 FAT1Q14517 4588 aa0.64□□□□□ -2.31
LSM1P1-201ENST00000438629 CSMD2Q7Z408 3487 aa0.63□□□□□ -2.31
LSM1P1-201ENST00000438629 AHNAKQ09666 5890 aaKnown RBP0.63□□□□□ -2.31
LSM1P1-201ENST00000438629 SONP18583 2426 aaKnown RBP0.63□□□□□ -2.31
LSM1P1-201ENST00000438629 UTP20O75691 2785 aaKnown RBP0.63□□□□□ -2.31
LSM1P1-201ENST00000438629 ITPR1Q14643 2758 aa0.63□□□□□ -2.31
LSM1P1-201ENST00000438629 DYNC1H1Q14204 4646 aaKnown RBP0.63□□□□□ -2.31
LSM1P1-201ENST00000438629 ITPR2Q14571 2701 aa0.63□□□□□ -2.31
LSM1P1-201ENST00000438629 ADGRG4Q8IZF6 3080 aa0.63□□□□□ -2.31
LSM1P1-201ENST00000438629 KALRNO60229 2985 aa0.63□□□□□ -2.31
LSM1P1-201ENST00000438629 LPAP08519 4548 aa0.62□□□□□ -2.31
LSM1P1-201ENST00000438629 AHNAK2Q8IVF2 5795 aa0.62□□□□□ -2.31
LSM1P1-201ENST00000438629 KMT2CQ8NEZ4 4911 aaKnown RBP0.62□□□□□ -2.31
LSM1P1-201ENST00000438629 ANKHD1Q8IWZ3 2542 aaKnown RBP0.62□□□□□ -2.31
LSM1P1-201ENST00000438629 TLN1Q9Y490 2541 aaKnown RBP0.62□□□□□ -2.31
LSM1P1-201ENST00000438629 EPPK1P58107 5090 aaKnown RBP0.62□□□□□ -2.31
LSM1P1-201ENST00000438629 TEX15Q9BXT5 2789 aa0.62□□□□□ -2.31
LSM1P1-201ENST00000438629 KRTAP19-5Q3LI72 72 aa0.62□□□□□ -2.31
LSM1P1-201ENST00000438629 RYR2Q92736 4967 aa0.62□□□□□ -2.31
LSM1P1-201ENST00000438629 SYNE1Q8NF91 8797 aaKnown RBP0.62□□□□□ -2.31
LSM1P1-201ENST00000438629 TRRAPQ9Y4A5 3859 aa0.62□□□□□ -2.31
LSM1P1-201ENST00000438629 NIPBLQ6KC79 2804 aaeCLIP0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 1227.3 ms