RNA–Protein interactions for RNA: ENST00000437952.1

UFM1-203, Transcript of ubiquitin fold modifier 1, humanhuman

TSL 3

Gene UFM1, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-203ENST00000437952 CENPEQ02224 2701 aa1.64□□□□□ -2.15
UFM1-203ENST00000437952 TTC28Q96AY4 2481 aa1.63□□□□□ -2.15
UFM1-203ENST00000437952 SRRM2Q9UQ35 2752 aaKnown RBP1.63□□□□□ -2.15
UFM1-203ENST00000437952 ITPR3Q14573 2671 aa1.63□□□□□ -2.15
UFM1-203ENST00000437952 CRCT1Q9UGL9 99 aa1.62□□□□□ -2.15
UFM1-203ENST00000437952 SETD2Q9BYW2 2564 aaPredicted RBP1.62□□□□□ -2.15
UFM1-203ENST00000437952 POLQO75417 2590 aa1.61□□□□□ -2.15
UFM1-203ENST00000437952 UBR5O95071 2799 aaPredicted RBP1.61□□□□□ -2.15
UFM1-203ENST00000437952 RPS29P62273 56 aaKnown RBP1.61□□□□□ -2.15
UFM1-203ENST00000437952 Q6ZRN7 208 aaPredicted RBP1.61□□□□□ -2.15
UFM1-203ENST00000437952 ACACBO00763 2458 aa1.61□□□□□ -2.15
UFM1-203ENST00000437952 TENM4Q6N022 2769 aa1.6□□□□□ -2.15
UFM1-203ENST00000437952 HECTD1Q9ULT8 2610 aa1.6□□□□□ -2.15
UFM1-203ENST00000437952 CCDC168Q8NDH2 2452 aa1.6□□□□□ -2.15
UFM1-203ENST00000437952 FLNCQ14315 2725 aa1.6□□□□□ -2.15
UFM1-203ENST00000437952 C10orf95Q9H7T3 257 aa1.6□□□□□ -2.15
UFM1-203ENST00000437952 APLNQ9ULZ1 77 aa1.6□□□□□ -2.15
UFM1-203ENST00000437952 ABCA12Q86UK0 2595 aa1.6□□□□□ -2.15
UFM1-203ENST00000437952 FLNAP21333 2647 aaKnown RBP1.6□□□□□ -2.15
UFM1-203ENST00000437952 TRRAPQ9Y4A5 3859 aa1.6□□□□□ -2.15
UFM1-203ENST00000437952 HELZ2Q9BYK8 2649 aaKnown RBP1.59□□□□□ -2.15
UFM1-203ENST00000437952 S4R3F8 94 aa1.59□□□□□ -2.15
UFM1-203ENST00000437952 FLG2Q5D862 2391 aaPredicted RBP1.59□□□□□ -2.16
UFM1-203ENST00000437952 DNAH8Q96JB1 4490 aa1.59□□□□□ -2.16
UFM1-203ENST00000437952 MYO18BQ8IUG5 2567 aa1.58□□□□□ -2.16
UFM1-203ENST00000437952 VWFP04275 2813 aa1.58□□□□□ -2.16
UFM1-203ENST00000437952 FLNBO75369 2602 aaKnown RBP1.58□□□□□ -2.16
UFM1-203ENST00000437952 FASNP49327 2511 aaKnown RBP1.58□□□□□ -2.16
UFM1-203ENST00000437952 CUBNO60494 3623 aa1.58□□□□□ -2.16
UFM1-203ENST00000437952 PKD1L1Q8TDX9 2849 aa1.58□□□□□ -2.16
UFM1-203ENST00000437952 DNAH10Q8IVF4 4471 aa1.57□□□□□ -2.16
UFM1-203ENST00000437952 MEGF8Q7Z7M0 2845 aa1.57□□□□□ -2.16
UFM1-203ENST00000437952 A0A0D9SG42 100 aa1.57□□□□□ -2.16
UFM1-203ENST00000437952 PLAC4Q8WY50 150 aa1.57□□□□□ -2.16
UFM1-203ENST00000437952 LYSTQ99698 3801 aa1.57□□□□□ -2.16
UFM1-203ENST00000437952 FAM208BQ5VWN6 2430 aa1.57□□□□□ -2.16
UFM1-203ENST00000437952 VPS13DQ5THJ4 4388 aa1.56□□□□□ -2.16
UFM1-203ENST00000437952 ANK2Q01484 3957 aa1.56□□□□□ -2.16
UFM1-203ENST00000437952 TENM3Q9P273 2699 aa1.56□□□□□ -2.16
UFM1-203ENST00000437952 FBN3Q75N90 2809 aa1.56□□□□□ -2.16
UFM1-203ENST00000437952 SMR3AQ99954 134 aa1.55□□□□□ -2.16
UFM1-203ENST00000437952 NBEAL1Q6ZS30 2694 aa1.55□□□□□ -2.16
UFM1-203ENST00000437952 DNAH3Q8TD57 4116 aa1.55□□□□□ -2.16
UFM1-203ENST00000437952 CSMD3Q7Z407 3707 aa1.55□□□□□ -2.16
UFM1-203ENST00000437952 DNAH9Q9NYC9 4486 aa1.55□□□□□ -2.16
UFM1-203ENST00000437952 ZNF469Q96JG9 3925 aaPredicted RBP1.55□□□□□ -2.16
UFM1-203ENST00000437952 IGSF10Q6WRI0 2623 aa1.54□□□□□ -2.16
UFM1-203ENST00000437952 PDZD2O15018 2839 aa1.54□□□□□ -2.16
UFM1-203ENST00000437952 M0QZ58 72 aa1.54□□□□□ -2.16
UFM1-203ENST00000437952 TGP01266 2768 aa1.54□□□□□ -2.16
UFM1-203ENST00000437952 DYNC2H1Q8NCM8 4307 aaKnown RBP1.54□□□□□ -2.16
UFM1-203ENST00000437952 FRAS1Q86XX4 4008 aa1.54□□□□□ -2.16
UFM1-203ENST00000437952 ACANP16112 2415 aa1.54□□□□□ -2.16
UFM1-203ENST00000437952 DNAH17Q9UFH2 4485 aa1.52□□□□□ -2.17
UFM1-203ENST00000437952 TENM1Q9UKZ4 2725 aa1.52□□□□□ -2.17
UFM1-203ENST00000437952 KRTAP4-1Q9BYQ7 146 aa1.52□□□□□ -2.17
UFM1-203ENST00000437952 HECTD4Q9Y4D8 3996 aa1.51□□□□□ -2.17
UFM1-203ENST00000437952 ATRQ13535 2644 aa1.51□□□□□ -2.17
UFM1-203ENST00000437952 PRO2289Q9P1D8 64 aa1.51□□□□□ -2.17
UFM1-203ENST00000437952 HUWE1Q7Z6Z7 4374 aaKnown RBP1.51□□□□□ -2.17
UFM1-203ENST00000437952 COL7A1Q02388 2944 aa1.51□□□□□ -2.17
UFM1-203ENST00000437952 ITPR2Q14571 2701 aa1.51□□□□□ -2.17
UFM1-203ENST00000437952 DNAH7Q8WXX0 4024 aa1.5□□□□□ -2.17
UFM1-203ENST00000437952 DNAH2Q9P225 4427 aa1.5□□□□□ -2.17
UFM1-203ENST00000437952 C9orf92A6NGG3 77 aa1.5□□□□□ -2.17
UFM1-203ENST00000437952 KRTAP21-3Q3LHN1 58 aa1.5□□□□□ -2.17
UFM1-203ENST00000437952 NSD1Q96L73 2696 aaPredicted RBP1.49□□□□□ -2.17
UFM1-203ENST00000437952 NOTCH1P46531 2555 aa1.49□□□□□ -2.17
UFM1-203ENST00000437952 PRKDCP78527 4128 aaKnown RBP1.49□□□□□ -2.17
UFM1-203ENST00000437952 COL6A5A8TX70 2615 aa1.49□□□□□ -2.17
UFM1-203ENST00000437952 STAB2Q8WWQ8 2551 aa1.49□□□□□ -2.17
UFM1-203ENST00000437952 INE1O15225 51 aa1.48□□□□□ -2.17
UFM1-203ENST00000437952 DNAH6Q9C0G6 4158 aa1.48□□□□□ -2.17
UFM1-203ENST00000437952 DNAH11Q96DT5 4516 aa1.47□□□□□ -2.17
UFM1-203ENST00000437952 CMYA5Q8N3K9 4069 aa1.46□□□□□ -2.18
UFM1-203ENST00000437952 PLECQ15149 4684 aaKnown RBP1.46□□□□□ -2.18
UFM1-203ENST00000437952 SACSQ9NZJ4 4579 aa1.45□□□□□ -2.18
UFM1-203ENST00000437952 UBR4Q5T4S7 5183 aa1.44□□□□□ -2.18
UFM1-203ENST00000437952 KMT2AQ03164 3969 aa1.44□□□□□ -2.18
UFM1-203ENST00000437952 FCGBPQ9Y6R7 5405 aaPredicted RBP1.43□□□□□ -2.18
UFM1-203ENST00000437952 DMBT1Q9UGM3 2413 aaPredicted RBP1.42□□□□□ -2.18
UFM1-203ENST00000437952 MGAM2Q2M2H8 2515 aa1.42□□□□□ -2.18
UFM1-203ENST00000437952 STAB1Q9NY15 2570 aa1.42□□□□□ -2.18
UFM1-203ENST00000437952 DNAH5Q8TE73 4624 aa1.41□□□□□ -2.18
UFM1-203ENST00000437952 LRP1BQ9NZR2 4599 aa1.41□□□□□ -2.18
UFM1-203ENST00000437952 MYCBP2O75592 4640 aa1.41□□□□□ -2.18
UFM1-203ENST00000437952 Q5VSD8 79 aa1.39□□□□□ -2.19
UFM1-203ENST00000437952 TNP1P09430 55 aa1.38□□□□□ -2.19
UFM1-203ENST00000437952 APOBP04114 4563 aaKnown RBP1.38□□□□□ -2.19
UFM1-203ENST00000437952 PKHD1L1Q86WI1 4243 aa1.38□□□□□ -2.19
UFM1-203ENST00000437952 LRP1Q07954 4544 aaKnown RBP1.38□□□□□ -2.19
UFM1-203ENST00000437952 STARD9Q9P2P6 4700 aa1.36□□□□□ -2.19
UFM1-203ENST00000437952 VPS13BQ7Z7G8 4022 aa1.36□□□□□ -2.19
UFM1-203ENST00000437952 PKD1P98161 4303 aa1.36□□□□□ -2.19
UFM1-203ENST00000437952 PKHD1P08F94 4074 aa1.35□□□□□ -2.19
UFM1-203ENST00000437952 FAT3Q8TDW7 4589 aa1.35□□□□□ -2.19
UFM1-203ENST00000437952 DYNC1H1Q14204 4646 aaKnown RBP1.35□□□□□ -2.19
UFM1-203ENST00000437952 KRTAP10-4P60372 401 aaPredicted RBP1.34□□□□□ -2.19
UFM1-203ENST00000437952 FAT2Q9NYQ8 4349 aa1.34□□□□□ -2.2
UFM1-203ENST00000437952 TNXBP22105 4242 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms