RNA–Protein interactions for RNA: ENST00000433419.2

CCDC144CP-202, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

BASIC

Gene CCDC144CP, Length 5,227 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-202ENST00000433419 DNAH5Q8TE73 4624 aa4.8□□□□□ -1.64
CCDC144CP-202ENST00000433419 PLECQ15149 4684 aaKnown RBP4.75□□□□□ -1.65
CCDC144CP-202ENST00000433419 DNAH1Q9P2D7 4330 aa4.7□□□□□ -1.66
CCDC144CP-202ENST00000433419 DNAH11Q96DT5 4516 aa4.66□□□□□ -1.66
CCDC144CP-202ENST00000433419 KRTAP12-3P60328 96 aa4.66□□□□□ -1.66
CCDC144CP-202ENST00000433419 CRCT1Q9UGL9 99 aa4.64□□□□□ -1.67
CCDC144CP-202ENST00000433419 VPS13DQ5THJ4 4388 aa4.61□□□□□ -1.67
CCDC144CP-202ENST00000433419 KRTAP23-1A1A580 65 aa4.61□□□□□ -1.67
CCDC144CP-202ENST00000433419 STARD9Q9P2P6 4700 aa4.61□□□□□ -1.67
CCDC144CP-202ENST00000433419 LORP23490 312 aaPredicted RBP4.6□□□□□ -1.67
CCDC144CP-202ENST00000433419 KRTAP8-1Q8IUC2 63 aa4.6□□□□□ -1.67
CCDC144CP-202ENST00000433419 DYNC1H1Q14204 4646 aaKnown RBP4.59□□□□□ -1.67
CCDC144CP-202ENST00000433419 PRKDCP78527 4128 aaKnown RBP4.58□□□□□ -1.68
CCDC144CP-202ENST00000433419 DNAH10Q8IVF4 4471 aa4.57□□□□□ -1.68
CCDC144CP-202ENST00000433419 MT1HP80294 61 aa4.55□□□□□ -1.68
CCDC144CP-202ENST00000433419 LRP1BQ9NZR2 4599 aa4.55□□□□□ -1.68
CCDC144CP-202ENST00000433419 ANK2Q01484 3957 aa4.54□□□□□ -1.68
CCDC144CP-202ENST00000433419 FAT1Q14517 4588 aa4.54□□□□□ -1.68
CCDC144CP-202ENST00000433419 DNAH17Q9UFH2 4485 aa4.54□□□□□ -1.68
CCDC144CP-202ENST00000433419 LCE3AQ5TA76 89 aa4.53□□□□□ -1.68
CCDC144CP-202ENST00000433419 KRTAP4-1Q9BYQ7 146 aa4.52□□□□□ -1.69
CCDC144CP-202ENST00000433419 RYR1P21817 5038 aa4.52□□□□□ -1.69
CCDC144CP-202ENST00000433419 INE1O15225 51 aa4.52□□□□□ -1.69
CCDC144CP-202ENST00000433419 MT2AP02795 61 aa4.48□□□□□ -1.69
CCDC144CP-202ENST00000433419 DNAH2Q9P225 4427 aa4.45□□□□□ -1.7
CCDC144CP-202ENST00000433419 FAT2Q9NYQ8 4349 aa4.44□□□□□ -1.7
CCDC144CP-202ENST00000433419 KMT2AQ03164 3969 aa4.42□□□□□ -1.7
CCDC144CP-202ENST00000433419 DYNC2H1Q8NCM8 4307 aaKnown RBP4.41□□□□□ -1.7
CCDC144CP-202ENST00000433419 SPRR2GQ9BYE4 73 aa4.41□□□□□ -1.7
CCDC144CP-202ENST00000433419 SACSQ9NZJ4 4579 aa4.4□□□□□ -1.71
CCDC144CP-202ENST00000433419 DNAH3Q8TD57 4116 aa4.4□□□□□ -1.71
CCDC144CP-202ENST00000433419 KIAA1109Q2LD37 5005 aa4.39□□□□□ -1.71
CCDC144CP-202ENST00000433419 LYSTQ99698 3801 aa4.36□□□□□ -1.71
CCDC144CP-202ENST00000433419 DNAH8Q96JB1 4490 aa4.36□□□□□ -1.71
CCDC144CP-202ENST00000433419 RYR3Q15413 4870 aa4.36□□□□□ -1.71
CCDC144CP-202ENST00000433419 MT1FP04733 61 aa4.35□□□□□ -1.71
CCDC144CP-202ENST00000433419 VPS13BQ7Z7G8 4022 aa4.33□□□□□ -1.72
CCDC144CP-202ENST00000433419 KRTAP17-1Q9BYP8 105 aa4.32□□□□□ -1.72
CCDC144CP-202ENST00000433419 SPRR2FQ96RM1 72 aa4.3□□□□□ -1.72
CCDC144CP-202ENST00000433419 CMYA5Q8N3K9 4069 aa4.29□□□□□ -1.72
CCDC144CP-202ENST00000433419 APOBP04114 4563 aaKnown RBP4.29□□□□□ -1.72
CCDC144CP-202ENST00000433419 KRTAP10-5P60370 271 aa4.25□□□□□ -1.73
CCDC144CP-202ENST00000433419 KRTAP10-7P60409 375 aaPredicted RBP4.24□□□□□ -1.73
CCDC144CP-202ENST00000433419 RYR2Q92736 4967 aa4.23□□□□□ -1.73
CCDC144CP-202ENST00000433419 MYCBP2O75592 4640 aa4.23□□□□□ -1.73
CCDC144CP-202ENST00000433419 KRTAP19-4Q3LI73 84 aa4.19□□□□□ -1.74
CCDC144CP-202ENST00000433419 LRP1Q07954 4544 aaKnown RBP4.19□□□□□ -1.74
CCDC144CP-202ENST00000433419 DNAH6Q9C0G6 4158 aa4.18□□□□□ -1.74
CCDC144CP-202ENST00000433419 HERC2O95714 4834 aa4.16□□□□□ -1.74
CCDC144CP-202ENST00000433419 DNAH7Q8WXX0 4024 aa4.14□□□□□ -1.75
CCDC144CP-202ENST00000433419 BIRC6Q9NR09 4857 aa4.14□□□□□ -1.75
CCDC144CP-202ENST00000433419 KRTAP19-8Q3LI54 63 aa4.13□□□□□ -1.75
CCDC144CP-202ENST00000433419 KRTAP19-5Q3LI72 72 aa4.13□□□□□ -1.75
CCDC144CP-202ENST00000433419 FAT3Q8TDW7 4589 aa4.13□□□□□ -1.75
CCDC144CP-202ENST00000433419 HYDINQ4G0P3 5121 aa4.12□□□□□ -1.75
CCDC144CP-202ENST00000433419 HECTD4Q9Y4D8 3996 aa4.11□□□□□ -1.75
CCDC144CP-202ENST00000433419 FRAS1Q86XX4 4008 aa4.1□□□□□ -1.75
CCDC144CP-202ENST00000433419 KRTAP19-1Q8IUB9 90 aa4.07□□□□□ -1.76
CCDC144CP-202ENST00000433419 SPRR2EP22531 72 aa4.06□□□□□ -1.76
CCDC144CP-202ENST00000433419 SPRR2BP35325 72 aa4.06□□□□□ -1.76
CCDC144CP-202ENST00000433419 SPRR2AP35326 72 aa4.06□□□□□ -1.76
CCDC144CP-202ENST00000433419 HSPG2P98160 4391 aa4.05□□□□□ -1.76
CCDC144CP-202ENST00000433419 LCE3CQ5T5A8 94 aa4.03□□□□□ -1.76
CCDC144CP-202ENST00000433419 PKHD1P08F94 4074 aa4.03□□□□□ -1.76
CCDC144CP-202ENST00000433419 PCLOQ9Y6V0 5065 aa3.99□□□□□ -1.77
CCDC144CP-202ENST00000433419 LRP2P98164 4655 aa3.99□□□□□ -1.77
CCDC144CP-202ENST00000433419 KRTAP9-8Q9BYQ0 159 aa3.99□□□□□ -1.77
CCDC144CP-202ENST00000433419 KMT2CQ8NEZ4 4911 aaKnown RBP3.98□□□□□ -1.77
CCDC144CP-202ENST00000433419 HERC1Q15751 4861 aa3.95□□□□□ -1.78
CCDC144CP-202ENST00000433419 MT1BP07438 61 aa3.94□□□□□ -1.78
CCDC144CP-202ENST00000433419 SPRR2DP22532 72 aa3.94□□□□□ -1.78
CCDC144CP-202ENST00000433419 MT1XP80297 61 aa3.93□□□□□ -1.78
CCDC144CP-202ENST00000433419 LCE2CQ5TA81 110 aa3.92□□□□□ -1.78
CCDC144CP-202ENST00000433419 LCE2BO14633 110 aa3.92□□□□□ -1.78
CCDC144CP-202ENST00000433419 KRTAP9-3Q9BYQ3 159 aa3.91□□□□□ -1.78
CCDC144CP-202ENST00000433419 PKD1P98161 4303 aa3.9□□□□□ -1.79
CCDC144CP-202ENST00000433419 MT1GP13640 62 aa3.87□□□□□ -1.79
CCDC144CP-202ENST00000433419 EPPK1P58107 5090 aaKnown RBP3.86□□□□□ -1.79
CCDC144CP-202ENST00000433419 KRTAP12-4P60329 112 aa3.86□□□□□ -1.79
CCDC144CP-202ENST00000433419 LPAP08519 4548 aa3.85□□□□□ -1.79
CCDC144CP-202ENST00000433419 PKHD1L1Q86WI1 4243 aa3.83□□□□□ -1.8
CCDC144CP-202ENST00000433419 ABCA13Q86UQ4 5058 aa3.81□□□□□ -1.8
CCDC144CP-202ENST00000433419 KRTAP4-8A0A0G2JLE6 195 aa3.77□□□□□ -1.81
CCDC144CP-202ENST00000433419 KRTAP4-8Q9BYQ9 185 aa3.77□□□□□ -1.81
CCDC144CP-202ENST00000433419 KRTAP19-2Q3LHN2 52 aa3.75□□□□□ -1.81
CCDC144CP-202ENST00000433419 TNXBP22105 4242 aa3.74□□□□□ -1.81
CCDC144CP-202ENST00000433419 KRTAP9-2Q9BYQ4 174 aa3.72□□□□□ -1.81
CCDC144CP-202ENST00000433419 LCE3BQ5TA77 95 aa3.72□□□□□ -1.81
CCDC144CP-202ENST00000433419 KRTAP19-3Q7Z4W3 81 aa3.69□□□□□ -1.82
CCDC144CP-202ENST00000433419 SPRR5A0A1B0GTR4 108 aa3.66□□□□□ -1.82
CCDC144CP-202ENST00000433419 KRTAP19-6Q3LI70 58 aa3.66□□□□□ -1.82
CCDC144CP-202ENST00000433419 LCE2DQ5TA82 110 aaPredicted RBP3.63□□□□□ -1.83
CCDC144CP-202ENST00000433419 MUC17Q685J3 4493 aa3.62□□□□□ -1.83
CCDC144CP-202ENST00000433419 UBR4Q5T4S7 5183 aa3.61□□□□□ -1.83
CCDC144CP-202ENST00000433419 FLGP20930 4061 aaPredicted RBP3.61□□□□□ -1.83
CCDC144CP-202ENST00000433419 SYNE1Q8NF91 8797 aaKnown RBP3.6□□□□□ -1.83
CCDC144CP-202ENST00000433419 KRTAP9-6A0A140TA67 174 aa3.58□□□□□ -1.84
CCDC144CP-202ENST00000433419 RNF213Q63HN8 5207 aa3.58□□□□□ -1.84
CCDC144CP-202ENST00000433419 FSIP2Q5CZC0 6907 aa3.58□□□□□ -1.84
CCDC144CP-202ENST00000433419 MT1EP04732 61 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms