RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 NREPQ16612 68 aa6.34□□□□□ -1.39
NUP50-209ENST00000432340 LOC110117498A0A087WWA1 95 aa6.33□□□□□ -1.4
NUP50-209ENST00000432340 CXCL6P80162 114 aa6.33□□□□□ -1.4
NUP50-209ENST00000432340 KRTAP5-10Q6L8G5 202 aa6.32□□□□□ -1.4
NUP50-209ENST00000432340 NAA38Q9BRA0 125 aaKnown RBP6.3□□□□□ -1.4
NUP50-209ENST00000432340 H0YAA0 97 aa6.29□□□□□ -1.4
NUP50-209ENST00000432340 SMIM6P0DI80 62 aa6.29□□□□□ -1.4
NUP50-209ENST00000432340 HCG22E2RYF7 251 aa6.28□□□□□ -1.4
NUP50-209ENST00000432340 HMCN1Q96RW7 5635 aa6.26□□□□□ -1.41
NUP50-209ENST00000432340 KRTAP10-12P60413 245 aa6.24□□□□□ -1.41
NUP50-209ENST00000432340 C14orf132Q9NPU4 83 aa6.24□□□□□ -1.41
NUP50-209ENST00000432340 AHNAK2Q8IVF2 5795 aa6.24□□□□□ -1.41
NUP50-209ENST00000432340 CASC2Q6XLA1 102 aa6.23□□□□□ -1.41
NUP50-209ENST00000432340 LCE4AQ5TA78 99 aa6.22□□□□□ -1.41
NUP50-209ENST00000432340 KRTAP5-7Q6L8G8 165 aa6.22□□□□□ -1.41
NUP50-209ENST00000432340 KRTAP10-7P60409 375 aaPredicted RBP6.21□□□□□ -1.42
NUP50-209ENST00000432340 TSTD3H0UI37 97 aa6.2□□□□□ -1.42
NUP50-209ENST00000432340 MT4P47944 62 aa6.19□□□□□ -1.42
NUP50-209ENST00000432340 C9orf118A6NHY6 69 aa6.18□□□□□ -1.42
NUP50-209ENST00000432340 H3BT86 120 aa6.17□□□□□ -1.42
NUP50-209ENST00000432340 NDUFC1O43677 76 aa6.17□□□□□ -1.42
NUP50-209ENST00000432340 BATFQ16520 125 aa6.16□□□□□ -1.42
NUP50-209ENST00000432340 BPY2O14599 106 aa6.15□□□□□ -1.42
NUP50-209ENST00000432340 TAX1BP3O14907 124 aa6.15□□□□□ -1.42
NUP50-209ENST00000432340 ADM2Q7Z4H4 148 aa6.15□□□□□ -1.42
NUP50-209ENST00000432340 A0A1W2PPM0 123 aa6.14□□□□□ -1.43
NUP50-209ENST00000432340 LCE5AQ5TCM9 118 aa6.14□□□□□ -1.43
NUP50-209ENST00000432340 R4GN34 69 aa6.14□□□□□ -1.43
NUP50-209ENST00000432340 LOC105371267A0A1B0GV96 52 aa6.11□□□□□ -1.43
NUP50-209ENST00000432340 SPRR5A0A1B0GTR4 108 aa6.08□□□□□ -1.44
NUP50-209ENST00000432340 C20orf197Q8N268 126 aa6.06□□□□□ -1.44
NUP50-209ENST00000432340 KRTAP19-3Q7Z4W3 81 aa6.04□□□□□ -1.44
NUP50-209ENST00000432340 SPCS1Q9Y6A9 102 aa6.04□□□□□ -1.44
NUP50-209ENST00000432340 A0A087WVE0 104 aa6.02□□□□□ -1.45
NUP50-209ENST00000432340 Q8N9L7 120 aa6.01□□□□□ -1.45
NUP50-209ENST00000432340 CYSTM1Q9H1C7 97 aa6.01□□□□□ -1.45
NUP50-209ENST00000432340 M0QZ58 72 aa6□□□□□ -1.45
NUP50-209ENST00000432340 KRTAP5-3Q6L8H2 238 aa6□□□□□ -1.45
NUP50-209ENST00000432340 TP53AIP1Q9HCN2 124 aa5.99□□□□□ -1.45
NUP50-209ENST00000432340 PRO0461Q9UI25 63 aa5.99□□□□□ -1.45
NUP50-209ENST00000432340 COL5A1-AS1Q5SY13 56 aa5.97□□□□□ -1.45
NUP50-209ENST00000432340 LINC01554Q52M75 96 aa5.96□□□□□ -1.46
NUP50-209ENST00000432340 UBL5Q9BZL1 73 aa5.95□□□□□ -1.46
NUP50-209ENST00000432340 K7EP34 96 aa5.93□□□□□ -1.46
NUP50-209ENST00000432340 CYP4F30PQ9H0H9 118 aa5.93□□□□□ -1.46
NUP50-209ENST00000432340 PP632Q6XCG6 107 aa5.89□□□□□ -1.47
NUP50-209ENST00000432340 MT1EP04732 61 aa5.88□□□□□ -1.47
NUP50-209ENST00000432340 KRTAP5-4Q6L8H1 288 aa5.87□□□□□ -1.47
NUP50-209ENST00000432340 KRTAP4-6Q9BYQ5 205 aa5.87□□□□□ -1.47
NUP50-209ENST00000432340 LOC100996750A0A140TA64 210 aa5.86□□□□□ -1.47
NUP50-209ENST00000432340 ACYP1P07311 99 aa5.86□□□□□ -1.47
NUP50-209ENST00000432340 F8W1H4 67 aa5.85□□□□□ -1.47
NUP50-209ENST00000432340 MT1GP13640 62 aa5.85□□□□□ -1.47
NUP50-209ENST00000432340 KRTAP19-7Q3SYF9 63 aa5.85□□□□□ -1.47
NUP50-209ENST00000432340 GTF2H5Q6ZYL4 71 aa5.84□□□□□ -1.47
NUP50-209ENST00000432340 LOC101927531A0A1B0GV80 90 aa5.82□□□□□ -1.48
NUP50-209ENST00000432340 P0C880 135 aa5.81□□□□□ -1.48
NUP50-209ENST00000432340 TRAV22A0A0B4J277 110 aa5.8□□□□□ -1.48
NUP50-209ENST00000432340 ETDBQ3ZM63 59 aa5.8□□□□□ -1.48
NUP50-209ENST00000432340 MT-ATP8P03928 68 aa5.73□□□□□ -1.49
NUP50-209ENST00000432340 PCP4L1A6NKN8 68 aa5.7□□□□□ -1.5
NUP50-209ENST00000432340 FAM240AA0A1B0GVK7 77 aa5.69□□□□□ -1.5
NUP50-209ENST00000432340 ATP5EP2Q5VTU8 51 aa5.67□□□□□ -1.5
NUP50-209ENST00000432340 MT1MQ8N339 61 aa5.65□□□□□ -1.5
NUP50-209ENST00000432340 UQCRQO14949 82 aa5.64□□□□□ -1.51
NUP50-209ENST00000432340 ATOX1O00244 68 aa5.61□□□□□ -1.51
NUP50-209ENST00000432340 HIST1H4AP62805 103 aaKnown RBP5.6□□□□□ -1.51
NUP50-209ENST00000432340 KRTAP20-2Q3LI61 65 aa5.6□□□□□ -1.51
NUP50-209ENST00000432340 H0Y9P7 68 aa5.58□□□□□ -1.52
NUP50-209ENST00000432340 LINC00643Q86TS7 51 aa5.57□□□□□ -1.52
NUP50-209ENST00000432340 CAMK2N1Q7Z7J9 78 aa5.55□□□□□ -1.52
NUP50-209ENST00000432340 KRTAP19-5Q3LI72 72 aa5.51□□□□□ -1.53
NUP50-209ENST00000432340 OCR1Q9BZK8 76 aa5.5□□□□□ -1.53
NUP50-209ENST00000432340 AHNAKQ09666 5890 aaKnown RBP5.5□□□□□ -1.53
NUP50-209ENST00000432340 LINC00208Q96KT6 92 aa5.49□□□□□ -1.53
NUP50-209ENST00000432340 KRTAP12-4P60329 112 aa5.47□□□□□ -1.53
NUP50-209ENST00000432340 MT1LQ93083 61 aa5.47□□□□□ -1.53
NUP50-209ENST00000432340 MP68P56378 58 aa5.46□□□□□ -1.54
NUP50-209ENST00000432340 KRTAP4-3Q9BYR4 195 aa5.44□□□□□ -1.54
NUP50-209ENST00000432340 A0A0D9SG42 100 aa5.42□□□□□ -1.54
NUP50-209ENST00000432340 H3BPC8 53 aa5.41□□□□□ -1.54
NUP50-209ENST00000432340 A0A1B0GV90 55 aa5.4□□□□□ -1.54
NUP50-209ENST00000432340 MUC5ACP98088 5654 aa5.4□□□□□ -1.55
NUP50-209ENST00000432340 DMAC1Q96GE9 116 aa5.36□□□□□ -1.55
NUP50-209ENST00000432340 J3QR89 54 aa5.35□□□□□ -1.55
NUP50-209ENST00000432340 KRTAP4-11Q9BYQ6 195 aa5.35□□□□□ -1.55
NUP50-209ENST00000432340 SCGB1A1P11684 91 aa5.31□□□□□ -1.56
NUP50-209ENST00000432340 SPTSSBQ8NFR3 76 aa5.26□□□□□ -1.57
NUP50-209ENST00000432340 TRAV7A0A075B6U4 112 aa5.25□□□□□ -1.57
NUP50-209ENST00000432340 MUC5BQ9HC84 5762 aaPredicted RBP5.25□□□□□ -1.57
NUP50-209ENST00000432340 KRTAP5-5Q701N2 237 aaPredicted RBP5.24□□□□□ -1.57
NUP50-209ENST00000432340 ACYP2P14621 99 aa5.21□□□□□ -1.58
NUP50-209ENST00000432340 KRTAP4-7Q9BYR0 210 aa5.2□□□□□ -1.58
NUP50-209ENST00000432340 SMIM20Q8N5G0 67 aa5.19□□□□□ -1.58
NUP50-209ENST00000432340 KRTAP5-8O75690 187 aa5.18□□□□□ -1.58
NUP50-209ENST00000432340 KRTAP9-9Q9BYP9 154 aa5.13□□□□□ -1.59
NUP50-209ENST00000432340 K7ERU9 68 aa5.11□□□□□ -1.59
NUP50-209ENST00000432340 C10orf95Q9H7T3 257 aa5.11□□□□□ -1.59
NUP50-209ENST00000432340 KRTAP4-12Q9BQ66 201 aa5.08□□□□□ -1.6
NUP50-209ENST00000432340 SYNE1Q8NF91 8797 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms