RNA–Protein interactions for RNA: ENST00000431877.6

SSFA2-205, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 5,150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-205ENST00000431877 ALMS1Q8TCU4 4167 aa7.33□□□□□ -1.24
SSFA2-205ENST00000431877 KRTAP23-1A1A580 65 aa7.32□□□□□ -1.24
SSFA2-205ENST00000431877 DNAH10Q8IVF4 4471 aa7.32□□□□□ -1.24
SSFA2-205ENST00000431877 KRTAP3-2Q9BYR7 98 aa7.28□□□□□ -1.24
SSFA2-205ENST00000431877 VPS13DQ5THJ4 4388 aa7.27□□□□□ -1.25
SSFA2-205ENST00000431877 STARD9Q9P2P6 4700 aa7.24□□□□□ -1.25
SSFA2-205ENST00000431877 DNAH17Q9UFH2 4485 aa7.19□□□□□ -1.26
SSFA2-205ENST00000431877 FAT1Q14517 4588 aa7.15□□□□□ -1.26
SSFA2-205ENST00000431877 DYNC1H1Q14204 4646 aaKnown RBP7.15□□□□□ -1.27
SSFA2-205ENST00000431877 PRKDCP78527 4128 aaKnown RBP7.14□□□□□ -1.27
SSFA2-205ENST00000431877 LRP1BQ9NZR2 4599 aa7.1□□□□□ -1.27
SSFA2-205ENST00000431877 DNAH2Q9P225 4427 aa7.05□□□□□ -1.28
SSFA2-205ENST00000431877 ANK2Q01484 3957 aa7.01□□□□□ -1.29
SSFA2-205ENST00000431877 RYR1P21817 5038 aa6.98□□□□□ -1.29
SSFA2-205ENST00000431877 DNAH8Q96JB1 4490 aa6.97□□□□□ -1.29
SSFA2-205ENST00000431877 KMT2AQ03164 3969 aa6.97□□□□□ -1.29
SSFA2-205ENST00000431877 DNAH3Q8TD57 4116 aa6.93□□□□□ -1.3
SSFA2-205ENST00000431877 LORP23490 312 aaPredicted RBP6.91□□□□□ -1.3
SSFA2-205ENST00000431877 DYNC2H1Q8NCM8 4307 aaKnown RBP6.9□□□□□ -1.31
SSFA2-205ENST00000431877 INE1O15225 51 aa6.88□□□□□ -1.31
SSFA2-205ENST00000431877 SACSQ9NZJ4 4579 aa6.88□□□□□ -1.31
SSFA2-205ENST00000431877 LYSTQ99698 3801 aa6.86□□□□□ -1.31
SSFA2-205ENST00000431877 FAT2Q9NYQ8 4349 aa6.86□□□□□ -1.31
SSFA2-205ENST00000431877 KIAA1109Q2LD37 5005 aa6.84□□□□□ -1.31
SSFA2-205ENST00000431877 KRTAP15-1Q3LI76 137 aa6.82□□□□□ -1.32
SSFA2-205ENST00000431877 KRTAP4-1Q9BYQ7 146 aa6.82□□□□□ -1.32
SSFA2-205ENST00000431877 VPS13BQ7Z7G8 4022 aa6.78□□□□□ -1.32
SSFA2-205ENST00000431877 CMYA5Q8N3K9 4069 aa6.77□□□□□ -1.33
SSFA2-205ENST00000431877 MYCBP2O75592 4640 aa6.76□□□□□ -1.33
SSFA2-205ENST00000431877 APOBP04114 4563 aaKnown RBP6.74□□□□□ -1.33
SSFA2-205ENST00000431877 RYR3Q15413 4870 aa6.73□□□□□ -1.33
SSFA2-205ENST00000431877 KRTAP10-12P60413 245 aa6.73□□□□□ -1.33
SSFA2-205ENST00000431877 DNAH6Q9C0G6 4158 aa6.63□□□□□ -1.35
SSFA2-205ENST00000431877 FRAS1Q86XX4 4008 aa6.62□□□□□ -1.35
SSFA2-205ENST00000431877 LRP1Q07954 4544 aaKnown RBP6.61□□□□□ -1.35
SSFA2-205ENST00000431877 KRTAP17-1Q9BYP8 105 aa6.61□□□□□ -1.35
SSFA2-205ENST00000431877 HECTD4Q9Y4D8 3996 aa6.57□□□□□ -1.36
SSFA2-205ENST00000431877 DNAH7Q8WXX0 4024 aa6.57□□□□□ -1.36
SSFA2-205ENST00000431877 LCE3AQ5TA76 89 aa6.57□□□□□ -1.36
SSFA2-205ENST00000431877 KRTAP12-3P60328 96 aa6.56□□□□□ -1.36
SSFA2-205ENST00000431877 MT1HP80294 61 aa6.53□□□□□ -1.36
SSFA2-205ENST00000431877 FAT3Q8TDW7 4589 aa6.53□□□□□ -1.36
SSFA2-205ENST00000431877 HYDINQ4G0P3 5121 aa6.53□□□□□ -1.36
SSFA2-205ENST00000431877 RYR2Q92736 4967 aa6.53□□□□□ -1.36
SSFA2-205ENST00000431877 MT2AP02795 61 aa6.45□□□□□ -1.38
SSFA2-205ENST00000431877 HERC2O95714 4834 aa6.39□□□□□ -1.39
SSFA2-205ENST00000431877 PKHD1P08F94 4074 aa6.39□□□□□ -1.39
SSFA2-205ENST00000431877 SPRR2GQ9BYE4 73 aa6.39□□□□□ -1.39
SSFA2-205ENST00000431877 CRCT1Q9UGL9 99 aa6.38□□□□□ -1.39
SSFA2-205ENST00000431877 MT1FP04733 61 aa6.35□□□□□ -1.39
SSFA2-205ENST00000431877 LRP2P98164 4655 aa6.32□□□□□ -1.4
SSFA2-205ENST00000431877 HSPG2P98160 4391 aa6.27□□□□□ -1.41
SSFA2-205ENST00000431877 KMT2CQ8NEZ4 4911 aaKnown RBP6.23□□□□□ -1.41
SSFA2-205ENST00000431877 BIRC6Q9NR09 4857 aa6.18□□□□□ -1.42
SSFA2-205ENST00000431877 KRTAP8-1Q8IUC2 63 aa6.18□□□□□ -1.42
SSFA2-205ENST00000431877 PKD1P98161 4303 aa6.17□□□□□ -1.42
SSFA2-205ENST00000431877 KRTAP19-1Q8IUB9 90 aa6.12□□□□□ -1.43
SSFA2-205ENST00000431877 PCLOQ9Y6V0 5065 aa6.06□□□□□ -1.44
SSFA2-205ENST00000431877 LPAP08519 4548 aa6.03□□□□□ -1.44
SSFA2-205ENST00000431877 HERC1Q15751 4861 aa6.03□□□□□ -1.44
SSFA2-205ENST00000431877 KRTAP19-8Q3LI54 63 aa5.99□□□□□ -1.45
SSFA2-205ENST00000431877 KRTAP19-5Q3LI72 72 aa5.97□□□□□ -1.45
SSFA2-205ENST00000431877 LCE2CQ5TA81 110 aa5.96□□□□□ -1.45
SSFA2-205ENST00000431877 EPPK1P58107 5090 aaKnown RBP5.95□□□□□ -1.46
SSFA2-205ENST00000431877 KRTAP9-8Q9BYQ0 159 aa5.93□□□□□ -1.46
SSFA2-205ENST00000431877 ABCA13Q86UQ4 5058 aa5.9□□□□□ -1.46
SSFA2-205ENST00000431877 KRTAP10-7P60409 375 aaPredicted RBP5.9□□□□□ -1.47
SSFA2-205ENST00000431877 TNXBP22105 4242 aa5.9□□□□□ -1.47
SSFA2-205ENST00000431877 KRTAP10-5P60370 271 aa5.9□□□□□ -1.47
SSFA2-205ENST00000431877 MT1BP07438 61 aa5.86□□□□□ -1.47
SSFA2-205ENST00000431877 MT1XP80297 61 aa5.86□□□□□ -1.47
SSFA2-205ENST00000431877 PKHD1L1Q86WI1 4243 aa5.85□□□□□ -1.47
SSFA2-205ENST00000431877 LCE3CQ5T5A8 94 aa5.81□□□□□ -1.48
SSFA2-205ENST00000431877 KRTAP19-2Q3LHN2 52 aa5.8□□□□□ -1.48
SSFA2-205ENST00000431877 SPRR2FQ96RM1 72 aa5.8□□□□□ -1.48
SSFA2-205ENST00000431877 KRTAP9-3Q9BYQ3 159 aa5.76□□□□□ -1.49
SSFA2-205ENST00000431877 MUC17Q685J3 4493 aa5.74□□□□□ -1.49
SSFA2-205ENST00000431877 FLGP20930 4061 aaPredicted RBP5.66□□□□□ -1.5
SSFA2-205ENST00000431877 KRTAP4-8A0A0G2JLE6 195 aa5.63□□□□□ -1.51
SSFA2-205ENST00000431877 KRTAP4-8Q9BYQ9 185 aa5.63□□□□□ -1.51
SSFA2-205ENST00000431877 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
SSFA2-205ENST00000431877 RNF213Q63HN8 5207 aa5.55□□□□□ -1.52
SSFA2-205ENST00000431877 FAT4Q6V0I7 4981 aa5.54□□□□□ -1.52
SSFA2-205ENST00000431877 LCE2BO14633 110 aa5.54□□□□□ -1.52
SSFA2-205ENST00000431877 UBR4Q5T4S7 5183 aa5.51□□□□□ -1.53
SSFA2-205ENST00000431877 SPRR5A0A1B0GTR4 108 aa5.47□□□□□ -1.53
SSFA2-205ENST00000431877 FSIP2Q5CZC0 6907 aa5.42□□□□□ -1.54
SSFA2-205ENST00000431877 MUC2Q02817 5179 aa5.39□□□□□ -1.55
SSFA2-205ENST00000431877 HMCN2Q8NDA2 5059 aa5.39□□□□□ -1.55
SSFA2-205ENST00000431877 MT1GP13640 62 aa5.38□□□□□ -1.55
SSFA2-205ENST00000431877 SPRR2EP22531 72 aa5.37□□□□□ -1.55
SSFA2-205ENST00000431877 SPRR2BP35325 72 aa5.37□□□□□ -1.55
SSFA2-205ENST00000431877 SPRR2AP35326 72 aa5.37□□□□□ -1.55
SSFA2-205ENST00000431877 KRTAP4-7Q9BYR0 210 aa5.28□□□□□ -1.56
SSFA2-205ENST00000431877 LCE3BQ5TA77 95 aa5.27□□□□□ -1.57
SSFA2-205ENST00000431877 LCE2AQ5TA79 106 aaPredicted RBP5.24□□□□□ -1.57
SSFA2-205ENST00000431877 MT1LQ93083 61 aa5.24□□□□□ -1.57
SSFA2-205ENST00000431877 MT3P25713 68 aa5.23□□□□□ -1.57
SSFA2-205ENST00000431877 MT1EP04732 61 aa5.22□□□□□ -1.57
SSFA2-205ENST00000431877 KRTAP19-3Q7Z4W3 81 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms