RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 RBM3P98179 157 aaKnown RBP1.53□□□□□ -2.16
PTPN4-204ENST00000431283 ADM2Q7Z4H4 148 aa1.53□□□□□ -2.16
PTPN4-204ENST00000431283 SPANXA2-OT1Q8N9U9 137 aa1.53□□□□□ -2.16
PTPN4-204ENST00000431283 FAM236AA0A1B0GUQ0 79 aa1.52□□□□□ -2.17
PTPN4-204ENST00000431283 FAM236BA0A1B0GV22 79 aa1.52□□□□□ -2.17
PTPN4-204ENST00000431283 S100A6P06703 90 aa1.52□□□□□ -2.17
PTPN4-204ENST00000431283 HIST3H2BBQ8N257 126 aa1.52□□□□□ -2.17
PTPN4-204ENST00000431283 HIST1H2BLQ99880 126 aa1.52□□□□□ -2.17
PTPN4-204ENST00000431283 HIGD1BQ9P298 99 aa1.52□□□□□ -2.17
PTPN4-204ENST00000431283 C9JAW5 83 aa1.51□□□□□ -2.17
PTPN4-204ENST00000431283 Q5VV11 94 aa1.51□□□□□ -2.17
PTPN4-204ENST00000431283 C14orf144Q96I85 54 aa1.51□□□□□ -2.17
PTPN4-204ENST00000431283 C8orf17Q9NRJ1 99 aa1.51□□□□□ -2.17
PTPN4-204ENST00000431283 GPR98Q8WXG9 6306 aa1.51□□□□□ -2.17
PTPN4-204ENST00000431283 NDUFS5O43920 106 aa1.5□□□□□ -2.17
PTPN4-204ENST00000431283 SCGB1C2P0DMR2 95 aa1.5□□□□□ -2.17
PTPN4-204ENST00000431283 S100A1P23297 94 aa1.5□□□□□ -2.17
PTPN4-204ENST00000431283 Q6ZQT0 140 aa1.5□□□□□ -2.17
PTPN4-204ENST00000431283 C2orf91Q6ZV80 131 aa1.5□□□□□ -2.17
PTPN4-204ENST00000431283 A0A1B0GW54 56 aa1.49□□□□□ -2.17
PTPN4-204ENST00000431283 SPATA45Q537H7 98 aa1.49□□□□□ -2.17
PTPN4-204ENST00000431283 VAMP8Q9BV40 100 aa1.49□□□□□ -2.17
PTPN4-204ENST00000431283 IMUPQ9GZP8 106 aa1.49□□□□□ -2.17
PTPN4-204ENST00000431283 hDV103S1A0JD37 113 aa1.48□□□□□ -2.17
PTPN4-204ENST00000431283 KRTAP2-3P0C7H8 128 aa1.48□□□□□ -2.17
PTPN4-204ENST00000431283 BAALC-AS2P0C853 105 aa1.48□□□□□ -2.17
PTPN4-204ENST00000431283 PDE6GP18545 87 aa1.48□□□□□ -2.17
PTPN4-204ENST00000431283 FXYD2P54710 66 aa1.48□□□□□ -2.17
PTPN4-204ENST00000431283 NREPQ16612 68 aa1.48□□□□□ -2.17
PTPN4-204ENST00000431283 C7orf65Q6ZTY9 151 aa1.48□□□□□ -2.17
PTPN4-204ENST00000431283 PRR15Q8IV56 129 aa1.48□□□□□ -2.17
PTPN4-204ENST00000431283 TMEM254Q8TBM7 123 aa1.48□□□□□ -2.17
PTPN4-204ENST00000431283 MRPL34Q9BQ48 92 aaKnown RBP1.48□□□□□ -2.17
PTPN4-204ENST00000431283 KRTAP2-4Q9BYR9 128 aa1.48□□□□□ -2.17
PTPN4-204ENST00000431283 JMJD7-PLA2G4BH0Y9G9 81 aa1.47□□□□□ -2.17
PTPN4-204ENST00000431283 K7ERJ3 54 aa1.47□□□□□ -2.17
PTPN4-204ENST00000431283 KRTAP12-1P59990 96 aa1.47□□□□□ -2.17
PTPN4-204ENST00000431283 HSD52Q0P140 79 aa1.47□□□□□ -2.17
PTPN4-204ENST00000431283 CSAG1Q6PB30 78 aa1.47□□□□□ -2.17
PTPN4-204ENST00000431283 LOC110117498A0A087WWA1 95 aa1.46□□□□□ -2.18
PTPN4-204ENST00000431283 MMP24-AS1A0A0U1RRL7 71 aa1.46□□□□□ -2.18
PTPN4-204ENST00000431283 MT1BP07438 61 aa1.46□□□□□ -2.18
PTPN4-204ENST00000431283 C4orf26Q17RF5 130 aa1.46□□□□□ -2.18
PTPN4-204ENST00000431283 KRTAP19-8Q3LI54 63 aa1.46□□□□□ -2.18
PTPN4-204ENST00000431283 SPRR2GQ9BYE4 73 aa1.46□□□□□ -2.18
PTPN4-204ENST00000431283 S4R3F8 94 aa1.46□□□□□ -2.18
PTPN4-204ENST00000431283 KLKP1Q107X0 134 aa1.45□□□□□ -2.18
PTPN4-204ENST00000431283 ATXN8Q156A1 80 aa1.45□□□□□ -2.18
PTPN4-204ENST00000431283 K7EQZ3 153 aa1.44□□□□□ -2.18
PTPN4-204ENST00000431283 SPRR2EP22531 72 aa1.44□□□□□ -2.18
PTPN4-204ENST00000431283 SPRR2BP35325 72 aa1.44□□□□□ -2.18
PTPN4-204ENST00000431283 SPRR2AP35326 72 aa1.44□□□□□ -2.18
PTPN4-204ENST00000431283 SPRR2FQ96RM1 72 aa1.44□□□□□ -2.18
PTPN4-204ENST00000431283 C14orf132Q9NPU4 83 aa1.44□□□□□ -2.18
PTPN4-204ENST00000431283 CRIPTQ9P021 101 aa1.44□□□□□ -2.18
PTPN4-204ENST00000431283 HCG22E2RYF7 251 aa1.43□□□□□ -2.18
PTPN4-204ENST00000431283 CASC2Q6XLA1 102 aa1.43□□□□□ -2.18
PTPN4-204ENST00000431283 LCA10Q71F78 164 aa1.43□□□□□ -2.18
PTPN4-204ENST00000431283 KRTAP2-1Q9BYU5 128 aa1.43□□□□□ -2.18
PTPN4-204ENST00000431283 PRO2289Q9P1D8 64 aa1.43□□□□□ -2.18
PTPN4-204ENST00000431283 UQCR10Q9UDW1 63 aa1.43□□□□□ -2.18
PTPN4-204ENST00000431283 KRTAP8-1Q8IUC2 63 aa1.41□□□□□ -2.18
PTPN4-204ENST00000431283 DSTQ03001 7570 aaKnown RBP1.41□□□□□ -2.18
PTPN4-204ENST00000431283 TSTD3H0UI37 97 aa1.4□□□□□ -2.19
PTPN4-204ENST00000431283 M0R143 59 aa1.4□□□□□ -2.19
PTPN4-204ENST00000431283 SPRR2DP22532 72 aa1.4□□□□□ -2.19
PTPN4-204ENST00000431283 PLAC4Q8WY50 150 aa1.4□□□□□ -2.19
PTPN4-204ENST00000431283 NAA38Q9BRA0 125 aaKnown RBP1.39□□□□□ -2.19
PTPN4-204ENST00000431283 TP53AIP1Q9HCN2 124 aa1.39□□□□□ -2.19
PTPN4-204ENST00000431283 A8MUN3 132 aa1.38□□□□□ -2.19
PTPN4-204ENST00000431283 H3BT86 120 aa1.38□□□□□ -2.19
PTPN4-204ENST00000431283 NDUFC1O43677 76 aa1.38□□□□□ -2.19
PTPN4-204ENST00000431283 PYY3Q5JQD4 70 aa1.38□□□□□ -2.19
PTPN4-204ENST00000431283 UBL5Q9BZL1 73 aa1.38□□□□□ -2.19
PTPN4-204ENST00000431283 H0YAA0 97 aa1.37□□□□□ -2.19
PTPN4-204ENST00000431283 PCP4L1A6NKN8 68 aa1.36□□□□□ -2.19
PTPN4-204ENST00000431283 MT1XP80297 61 aa1.36□□□□□ -2.19
PTPN4-204ENST00000431283 LOC101927531A0A1B0GV80 90 aa1.35□□□□□ -2.19
PTPN4-204ENST00000431283 ACYP1P07311 99 aa1.35□□□□□ -2.19
PTPN4-204ENST00000431283 SEC61GP60059 68 aa1.35□□□□□ -2.19
PTPN4-204ENST00000431283 C20orf197Q8N268 126 aa1.35□□□□□ -2.19
PTPN4-204ENST00000431283 CYP4F30PQ9H0H9 118 aa1.35□□□□□ -2.19
PTPN4-204ENST00000431283 R4GN34 69 aa1.35□□□□□ -2.19
PTPN4-204ENST00000431283 TRAV22A0A0B4J277 110 aa1.34□□□□□ -2.19
PTPN4-204ENST00000431283 BATFQ16520 125 aa1.34□□□□□ -2.19
PTPN4-204ENST00000431283 A0A087WVE0 104 aa1.33□□□□□ -2.2
PTPN4-204ENST00000431283 A0A1W2PPM0 123 aa1.33□□□□□ -2.2
PTPN4-204ENST00000431283 K7EP34 96 aa1.32□□□□□ -2.2
PTPN4-204ENST00000431283 M0QZ58 72 aa1.32□□□□□ -2.2
PTPN4-204ENST00000431283 ATOX1O00244 68 aa1.32□□□□□ -2.2
PTPN4-204ENST00000431283 LINC01554Q52M75 96 aa1.32□□□□□ -2.2
PTPN4-204ENST00000431283 SPCS1Q9Y6A9 102 aa1.31□□□□□ -2.2
PTPN4-204ENST00000431283 UQCRQO14949 82 aa1.3□□□□□ -2.2
PTPN4-204ENST00000431283 AHNAK2Q8IVF2 5795 aa1.29□□□□□ -2.2
PTPN4-204ENST00000431283 H0Y9P7 68 aa1.29□□□□□ -2.2
PTPN4-204ENST00000431283 TAX1BP3O14907 124 aa1.29□□□□□ -2.2
PTPN4-204ENST00000431283 MT-ATP8P03928 68 aa1.29□□□□□ -2.2
PTPN4-204ENST00000431283 SMIM6P0DI80 62 aa1.28□□□□□ -2.2
PTPN4-204ENST00000431283 MP68P56378 58 aa1.27□□□□□ -2.21
PTPN4-204ENST00000431283 HIST1H4AP62805 103 aaKnown RBP1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms